BLASTX nr result
ID: Dioscorea21_contig00036161
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00036161 (285 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266... 111 7e-23 emb|CBI35955.3| unnamed protein product [Vitis vinifera] 111 7e-23 emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera] 111 7e-23 ref|XP_002527400.1| pentatricopeptide repeat-containing protein,... 107 8e-22 ref|XP_004146851.1| PREDICTED: putative pentatricopeptide repeat... 101 7e-20 >ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266920 [Vitis vinifera] Length = 1753 Score = 111 bits (277), Expect = 7e-23 Identities = 46/94 (48%), Positives = 67/94 (71%) Frame = +3 Query: 3 DTFTFPLITKAASFSGNPNICRCIHGHAIAIGYECHLHVGNELVAMYANMGRMDLAGYVF 182 D FTFPL+ +A + G+ +CR +HGH + +G++ +LHVGNEL+ MY +GRMD A VF Sbjct: 972 DGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVF 1031 Query: 183 DGMPVRNVISWNLLISGFATNFDCENACDAFRRM 284 + M VR+ +SWN ++SG+A N+DC A + FR M Sbjct: 1032 ERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMM 1065 >emb|CBI35955.3| unnamed protein product [Vitis vinifera] Length = 708 Score = 111 bits (277), Expect = 7e-23 Identities = 46/94 (48%), Positives = 67/94 (71%) Frame = +3 Query: 3 DTFTFPLITKAASFSGNPNICRCIHGHAIAIGYECHLHVGNELVAMYANMGRMDLAGYVF 182 D FTFPL+ +A + G+ +CR +HGH + +G++ +LHVGNEL+ MY +GRMD A VF Sbjct: 134 DGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVF 193 Query: 183 DGMPVRNVISWNLLISGFATNFDCENACDAFRRM 284 + M VR+ +SWN ++SG+A N+DC A + FR M Sbjct: 194 ERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMM 227 >emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera] Length = 954 Score = 111 bits (277), Expect = 7e-23 Identities = 46/94 (48%), Positives = 67/94 (71%) Frame = +3 Query: 3 DTFTFPLITKAASFSGNPNICRCIHGHAIAIGYECHLHVGNELVAMYANMGRMDLAGYVF 182 D FTFPL+ +A + G+ +CR +HGH + +G++ +LHVGNEL+ MY +GRMD A VF Sbjct: 134 DGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVF 193 Query: 183 DGMPVRNVISWNLLISGFATNFDCENACDAFRRM 284 + M VR+ +SWN ++SG+A N+DC A + FR M Sbjct: 194 ERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMM 227 >ref|XP_002527400.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223533210|gb|EEF34966.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 621 Score = 107 bits (268), Expect = 8e-22 Identities = 46/94 (48%), Positives = 68/94 (72%) Frame = +3 Query: 3 DTFTFPLITKAASFSGNPNICRCIHGHAIAIGYECHLHVGNELVAMYANMGRMDLAGYVF 182 D FTFPL+ +A ++ G+ + + IHGH + +G++ HLHVGNEL+ MYA +GRM A ++F Sbjct: 41 DGFTFPLVIRACAYMGSFILGKTIHGHVLEMGFQSHLHVGNELIGMYAKLGRMRDARHLF 100 Query: 183 DGMPVRNVISWNLLISGFATNFDCENACDAFRRM 284 D M VR+ ISWN ++S +A N+DC A + F+RM Sbjct: 101 DRMSVRSYISWNTMVSAYAFNYDCNGALEIFQRM 134 >ref|XP_004146851.1| PREDICTED: putative pentatricopeptide repeat-containing protein At1g17630-like [Cucumis sativus] gi|449522932|ref|XP_004168479.1| PREDICTED: putative pentatricopeptide repeat-containing protein At1g17630-like [Cucumis sativus] Length = 705 Score = 101 bits (251), Expect = 7e-20 Identities = 45/94 (47%), Positives = 65/94 (69%) Frame = +3 Query: 3 DTFTFPLITKAASFSGNPNICRCIHGHAIAIGYECHLHVGNELVAMYANMGRMDLAGYVF 182 D FTFPL+ +A+S G N+C+ +H H + G++ HLHVGNEL+ MYA + RMD A VF Sbjct: 138 DGFTFPLLLRASSNLGAFNMCKNLHCHVVQFGFQNHLHVGNELIGMYAKLERMDDARKVF 197 Query: 183 DGMPVRNVISWNLLISGFATNFDCENACDAFRRM 284 D M +++V+SWN ++SG+A N+D A F +M Sbjct: 198 DKMRIKSVVSWNTMVSGYAYNYDVNGASRMFHQM 231