BLASTX nr result

ID: Dioscorea21_contig00036161 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036161
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266...   111   7e-23
emb|CBI35955.3| unnamed protein product [Vitis vinifera]              111   7e-23
emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera]   111   7e-23
ref|XP_002527400.1| pentatricopeptide repeat-containing protein,...   107   8e-22
ref|XP_004146851.1| PREDICTED: putative pentatricopeptide repeat...   101   7e-20

>ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266920 [Vitis vinifera]
          Length = 1753

 Score =  111 bits (277), Expect = 7e-23
 Identities = 46/94 (48%), Positives = 67/94 (71%)
 Frame = +3

Query: 3    DTFTFPLITKAASFSGNPNICRCIHGHAIAIGYECHLHVGNELVAMYANMGRMDLAGYVF 182
            D FTFPL+ +A +  G+  +CR +HGH + +G++ +LHVGNEL+ MY  +GRMD A  VF
Sbjct: 972  DGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVF 1031

Query: 183  DGMPVRNVISWNLLISGFATNFDCENACDAFRRM 284
            + M VR+ +SWN ++SG+A N+DC  A + FR M
Sbjct: 1032 ERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMM 1065


>emb|CBI35955.3| unnamed protein product [Vitis vinifera]
          Length = 708

 Score =  111 bits (277), Expect = 7e-23
 Identities = 46/94 (48%), Positives = 67/94 (71%)
 Frame = +3

Query: 3   DTFTFPLITKAASFSGNPNICRCIHGHAIAIGYECHLHVGNELVAMYANMGRMDLAGYVF 182
           D FTFPL+ +A +  G+  +CR +HGH + +G++ +LHVGNEL+ MY  +GRMD A  VF
Sbjct: 134 DGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVF 193

Query: 183 DGMPVRNVISWNLLISGFATNFDCENACDAFRRM 284
           + M VR+ +SWN ++SG+A N+DC  A + FR M
Sbjct: 194 ERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMM 227


>emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera]
          Length = 954

 Score =  111 bits (277), Expect = 7e-23
 Identities = 46/94 (48%), Positives = 67/94 (71%)
 Frame = +3

Query: 3   DTFTFPLITKAASFSGNPNICRCIHGHAIAIGYECHLHVGNELVAMYANMGRMDLAGYVF 182
           D FTFPL+ +A +  G+  +CR +HGH + +G++ +LHVGNEL+ MY  +GRMD A  VF
Sbjct: 134 DGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVF 193

Query: 183 DGMPVRNVISWNLLISGFATNFDCENACDAFRRM 284
           + M VR+ +SWN ++SG+A N+DC  A + FR M
Sbjct: 194 ERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMM 227


>ref|XP_002527400.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223533210|gb|EEF34966.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 621

 Score =  107 bits (268), Expect = 8e-22
 Identities = 46/94 (48%), Positives = 68/94 (72%)
 Frame = +3

Query: 3   DTFTFPLITKAASFSGNPNICRCIHGHAIAIGYECHLHVGNELVAMYANMGRMDLAGYVF 182
           D FTFPL+ +A ++ G+  + + IHGH + +G++ HLHVGNEL+ MYA +GRM  A ++F
Sbjct: 41  DGFTFPLVIRACAYMGSFILGKTIHGHVLEMGFQSHLHVGNELIGMYAKLGRMRDARHLF 100

Query: 183 DGMPVRNVISWNLLISGFATNFDCENACDAFRRM 284
           D M VR+ ISWN ++S +A N+DC  A + F+RM
Sbjct: 101 DRMSVRSYISWNTMVSAYAFNYDCNGALEIFQRM 134


>ref|XP_004146851.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g17630-like [Cucumis sativus]
           gi|449522932|ref|XP_004168479.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At1g17630-like [Cucumis sativus]
          Length = 705

 Score =  101 bits (251), Expect = 7e-20
 Identities = 45/94 (47%), Positives = 65/94 (69%)
 Frame = +3

Query: 3   DTFTFPLITKAASFSGNPNICRCIHGHAIAIGYECHLHVGNELVAMYANMGRMDLAGYVF 182
           D FTFPL+ +A+S  G  N+C+ +H H +  G++ HLHVGNEL+ MYA + RMD A  VF
Sbjct: 138 DGFTFPLLLRASSNLGAFNMCKNLHCHVVQFGFQNHLHVGNELIGMYAKLERMDDARKVF 197

Query: 183 DGMPVRNVISWNLLISGFATNFDCENACDAFRRM 284
           D M +++V+SWN ++SG+A N+D   A   F +M
Sbjct: 198 DKMRIKSVVSWNTMVSGYAYNYDVNGASRMFHQM 231


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