BLASTX nr result

ID: Dioscorea21_contig00035922 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00035922
         (715 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002882907.1| hypothetical protein ARALYDRAFT_478926 [Arab...    69   7e-10
ref|XP_002862182.1| predicted protein [Arabidopsis lyrata subsp....    69   7e-10
ref|NP_566496.1| cobalt ion binding protein [Arabidopsis thalian...    69   7e-10
ref|XP_004168263.1| PREDICTED: uncharacterized protein At3g15000...    67   3e-09
ref|XP_004143682.1| PREDICTED: uncharacterized protein At3g15000...    67   3e-09

>ref|XP_002882907.1| hypothetical protein ARALYDRAFT_478926 [Arabidopsis lyrata subsp.
           lyrata] gi|297328747|gb|EFH59166.1| hypothetical protein
           ARALYDRAFT_478926 [Arabidopsis lyrata subsp. lyrata]
          Length = 396

 Score = 69.3 bits (168), Expect = 7e-10
 Identities = 36/67 (53%), Positives = 44/67 (65%)
 Frame = -2

Query: 303 STQLLIFSRNDPWQN*SNCPPKETILQDERDFKHLLIIKGPPNPNYMRDEIINSYIITFA 124
           STQ    S NDP  N SN PPKETIL D  DF+H L++  PP  +  RD+II+SYI T A
Sbjct: 66  STQATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVVNPPEGDPTRDDIIDSYIKTLA 125

Query: 123 SVIDSED 103
            ++ SED
Sbjct: 126 QIVGSED 132


>ref|XP_002862182.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297307414|gb|EFH38440.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 147

 Score = 69.3 bits (168), Expect = 7e-10
 Identities = 36/67 (53%), Positives = 44/67 (65%)
 Frame = -2

Query: 303 STQLLIFSRNDPWQN*SNCPPKETILQDERDFKHLLIIKGPPNPNYMRDEIINSYIITFA 124
           STQ    S NDP  N SN PPKETIL D  DF+H L++  PP  +  RD+II+SYI T A
Sbjct: 71  STQATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVVNPPEGDPTRDDIIDSYIKTLA 130

Query: 123 SVIDSED 103
            ++ SED
Sbjct: 131 QIVGSED 137


>ref|NP_566496.1| cobalt ion binding protein [Arabidopsis thaliana]
           gi|25091502|sp|Q9LKA5.1|UMP1_ARATH RecName:
           Full=Uncharacterized protein At3g15000, mitochondrial
           gi|16226543|gb|AAL16196.1|AF428427_1 AT3g15000/K15M2_14
           [Arabidopsis thaliana] gi|8777483|dbj|BAA97063.1|
           unnamed protein product [Arabidopsis thaliana]
           gi|53828643|gb|AAU94431.1| At3g15000 [Arabidopsis
           thaliana] gi|110740938|dbj|BAE98564.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332642080|gb|AEE75601.1| cobalt ion binding protein
           [Arabidopsis thaliana]
          Length = 395

 Score = 69.3 bits (168), Expect = 7e-10
 Identities = 37/67 (55%), Positives = 43/67 (64%)
 Frame = -2

Query: 303 STQLLIFSRNDPWQN*SNCPPKETILQDERDFKHLLIIKGPPNPNYMRDEIINSYIITFA 124
           STQ    S NDP  N SN PPKETIL D  DF+H L++  PP     RDEII+SYI T A
Sbjct: 66  STQATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVVEPPQGEPTRDEIIDSYIKTLA 125

Query: 123 SVIDSED 103
            ++ SED
Sbjct: 126 QIVGSED 132


>ref|XP_004168263.1| PREDICTED: uncharacterized protein At3g15000, mitochondrial-like,
           partial [Cucumis sativus]
          Length = 278

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 36/68 (52%), Positives = 44/68 (64%)
 Frame = -2

Query: 306 FSTQLLIFSRNDPWQN*SNCPPKETILQDERDFKHLLIIKGPPNPNYMRDEIINSYIITF 127
           FST+    S NDP  N SN PPKETIL D  DF+H L++   P+    RDEII+SYI T 
Sbjct: 69  FSTRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPDEQLTRDEIIDSYIKTL 128

Query: 126 ASVIDSED 103
           A V+ SE+
Sbjct: 129 AMVVGSEE 136


>ref|XP_004143682.1| PREDICTED: uncharacterized protein At3g15000, mitochondrial-like
           [Cucumis sativus] gi|449531840|ref|XP_004172893.1|
           PREDICTED: uncharacterized protein At3g15000,
           mitochondrial-like [Cucumis sativus]
          Length = 350

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 36/68 (52%), Positives = 45/68 (66%)
 Frame = -2

Query: 306 FSTQLLIFSRNDPWQN*SNCPPKETILQDERDFKHLLIIKGPPNPNYMRDEIINSYIITF 127
           F+T++   S NDP  N SN PPKETIL D  DF+H LI+   P+    RDEII+SYI T 
Sbjct: 71  FATRVASSSLNDPNPNWSNRPPKETILLDGCDFEHWLIVMEKPDEQLTRDEIIDSYIKTL 130

Query: 126 ASVIDSED 103
           A V+ SE+
Sbjct: 131 AMVVGSEE 138


Top