BLASTX nr result

ID: Dioscorea21_contig00035683 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00035683
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002456435.1| hypothetical protein SORBIDRAFT_03g036255 [S...   124   6e-27
ref|NP_001044421.2| Os01g0777300 [Oryza sativa Japonica Group] g...   119   2e-25
dbj|BAJ88855.1| predicted protein [Hordeum vulgare subsp. vulgare]    119   3e-25
ref|NP_001167749.1| uncharacterized protein LOC100381439 [Zea ma...   119   3e-25
ref|XP_002317312.1| predicted protein [Populus trichocarpa] gi|2...   118   6e-25

>ref|XP_002456435.1| hypothetical protein SORBIDRAFT_03g036255 [Sorghum bicolor]
           gi|241928410|gb|EES01555.1| hypothetical protein
           SORBIDRAFT_03g036255 [Sorghum bicolor]
          Length = 823

 Score =  124 bits (312), Expect = 6e-27
 Identities = 56/75 (74%), Positives = 65/75 (86%)
 Frame = -2

Query: 227 LKRAHALVQKFKSYEKVIKHLRYNSVAVPPHYEETFKKAMWAFQHQRVYDPAKEDIVHLS 48
           +KRAHAL+QK K +EKVIKHLRY +V+VPP YEE FKKA+WAF+ QRVYDPA EDI+HLS
Sbjct: 236 VKRAHALIQKLKCHEKVIKHLRYGAVSVPPQYEEDFKKAIWAFKFQRVYDPATEDIIHLS 295

Query: 47  DIPHDLTLDLEFLGP 3
            +PHDL  DLEFLGP
Sbjct: 296 SVPHDLIEDLEFLGP 310


>ref|NP_001044421.2| Os01g0777300 [Oryza sativa Japonica Group]
           gi|75114038|sp|Q60GC1.1|EXO1_ORYSJ RecName:
           Full=Exonuclease 1; AltName: Full=OsEXO-1
           gi|54111120|dbj|BAD60834.1| exonuclease-1 [Oryza sativa
           Japonica Group] gi|255673742|dbj|BAF06335.2|
           Os01g0777300 [Oryza sativa Japonica Group]
          Length = 836

 Score =  119 bits (299), Expect = 2e-25
 Identities = 54/75 (72%), Positives = 64/75 (85%)
 Frame = -2

Query: 227 LKRAHALVQKFKSYEKVIKHLRYNSVAVPPHYEETFKKAMWAFQHQRVYDPAKEDIVHLS 48
           +KRAHAL+QK K +EKVIKHLRY++V+VPP YEE F+KA+WAFQ QRVYDP  EDIVHLS
Sbjct: 236 VKRAHALIQKLKGHEKVIKHLRYSAVSVPPQYEENFRKAIWAFQFQRVYDPVTEDIVHLS 295

Query: 47  DIPHDLTLDLEFLGP 3
            IPH  + DL+FLGP
Sbjct: 296 GIPHGSSEDLDFLGP 310


>dbj|BAJ88855.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 906

 Score =  119 bits (298), Expect = 3e-25
 Identities = 57/75 (76%), Positives = 66/75 (88%)
 Frame = -2

Query: 227 LKRAHALVQKFKSYEKVIKHLRYNSVAVPPHYEETFKKAMWAFQHQRVYDPAKEDIVHLS 48
           +KRAHAL+QK KS+EKVIKHLRY++V+VPP YEE FKKA+WAFQ QRVYDPA EDIVHLS
Sbjct: 236 VKRAHALIQKLKSHEKVIKHLRYSAVSVPPQYEENFKKAIWAFQFQRVYDPATEDIVHLS 295

Query: 47  DIPHDLTLDLEFLGP 3
            IP DL+ D +FLGP
Sbjct: 296 GIPSDLSED-DFLGP 309


>ref|NP_001167749.1| uncharacterized protein LOC100381439 [Zea mays]
           gi|223943749|gb|ACN25958.1| unknown [Zea mays]
           gi|414880249|tpg|DAA57380.1| TPA: hypothetical protein
           ZEAMMB73_036244 [Zea mays]
          Length = 826

 Score =  119 bits (298), Expect = 3e-25
 Identities = 54/75 (72%), Positives = 63/75 (84%)
 Frame = -2

Query: 227 LKRAHALVQKFKSYEKVIKHLRYNSVAVPPHYEETFKKAMWAFQHQRVYDPAKEDIVHLS 48
           +KRAHAL+QK K +EKVIKHLRY +V+VPP YEE FKKA+WAF+ QRVYDPA EDI+HLS
Sbjct: 236 VKRAHALIQKLKCHEKVIKHLRYGAVSVPPQYEEDFKKAIWAFKFQRVYDPATEDIIHLS 295

Query: 47  DIPHDLTLDLEFLGP 3
            +P  L  DLEFLGP
Sbjct: 296 SVPQSLIEDLEFLGP 310


>ref|XP_002317312.1| predicted protein [Populus trichocarpa] gi|222860377|gb|EEE97924.1|
           predicted protein [Populus trichocarpa]
          Length = 398

 Score =  118 bits (295), Expect = 6e-25
 Identities = 54/75 (72%), Positives = 66/75 (88%)
 Frame = -2

Query: 227 LKRAHALVQKFKSYEKVIKHLRYNSVAVPPHYEETFKKAMWAFQHQRVYDPAKEDIVHLS 48
           LKRAHAL+ KFKSY+KVIKHLRY++V+VPP YEE+FKKA+  F+HQRVYDP  +DIVHLS
Sbjct: 236 LKRAHALITKFKSYDKVIKHLRYSTVSVPPLYEESFKKAILTFRHQRVYDPTMKDIVHLS 295

Query: 47  DIPHDLTLDLEFLGP 3
           D+P ++  DLEFLGP
Sbjct: 296 DLPDNIGNDLEFLGP 310


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