BLASTX nr result

ID: Dioscorea21_contig00035544 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00035544
         (230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281027.1| PREDICTED: uncharacterized protein LOC100247...    66   3e-09
emb|CAN75641.1| hypothetical protein VITISV_029178 [Vitis vinifera]    63   2e-08
gb|AFH03054.1| R2R3-MYB transcription factor MYB2 [Epimedium sag...    62   4e-08
ref|XP_002320929.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
gb|AFP65715.1| R2R3 MYB [Iris fulva]                                   61   1e-07

>ref|XP_002281027.1| PREDICTED: uncharacterized protein LOC100247039 [Vitis vinifera]
          Length = 451

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 34/73 (46%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
 Frame = -1

Query: 230 SSGSTINSAANGIELQRGAASFFDNAIFQW--SDLTHSSKEAQIQQLESEPEDLKWSEYL 57
           +S ++ + +++  ELQ  + SFF+N+IF W  +D + S K AQI  +ESEPED+KW EYL
Sbjct: 331 NSSNSSSGSSSSAELQSNS-SFFENSIFPWGLADCSTSDKGAQIHIIESEPEDIKWPEYL 389

Query: 56  QGTFSMSAAIHGQ 18
           Q  F M+AA+  Q
Sbjct: 390 QNPFLMAAALQNQ 402


>emb|CAN75641.1| hypothetical protein VITISV_029178 [Vitis vinifera]
          Length = 380

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 33/73 (45%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
 Frame = -1

Query: 230 SSGSTINSAANGIELQRGAASFFDNAIFQW--SDLTHSSKEAQIQQLESEPEDLKWSEYL 57
           +S ++ + +++  ELQ  + SFF+N+IF W  +D + S K AQI  +ESE ED+KW EYL
Sbjct: 260 NSSNSSSGSSSSAELQSNS-SFFENSIFPWGLADCSTSDKGAQIHIIESEQEDIKWPEYL 318

Query: 56  QGTFSMSAAIHGQ 18
           Q  F M+AA+  Q
Sbjct: 319 QNPFLMAAALQNQ 331


>gb|AFH03054.1| R2R3-MYB transcription factor MYB2 [Epimedium sagittatum]
          Length = 440

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 36/70 (51%), Positives = 48/70 (68%), Gaps = 3/70 (4%)
 Frame = -1

Query: 230 SSGSTINS-AANGIELQRGAASFFDNAIFQW--SDLTHSSKEAQIQQLESEPEDLKWSEY 60
           S+ S  NS +++ IELQ  + S F+N +F W  +D +   KEAQI   E+EPED+KWSEY
Sbjct: 315 SNTSRSNSGSSSSIELQ-SSNSMFENNVFSWGSADCSVPDKEAQIHPPEAEPEDIKWSEY 373

Query: 59  LQGTFSMSAA 30
           LQ TF M+AA
Sbjct: 374 LQNTFLMAAA 383


>ref|XP_002320929.1| predicted protein [Populus trichocarpa] gi|222861702|gb|EEE99244.1|
           predicted protein [Populus trichocarpa]
          Length = 464

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 32/74 (43%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
 Frame = -1

Query: 227 SGSTINSAANGIELQRGAASFFDNAIFQWS--DLTHSSKEAQIQQLESEPEDLKWSEYLQ 54
           S S  N+ +NG    +  +SFF+NAIF W   +   + KEAQ   + S+ ED+KW EYLQ
Sbjct: 339 SNSNSNTVSNGSTELQSNSSFFENAIFSWGLGECGSAEKEAQNHLMGSQHEDIKWPEYLQ 398

Query: 53  GTFSMSAAIHGQNQ 12
               M+AA+  QNQ
Sbjct: 399 NPLLMAAALQNQNQ 412


>gb|AFP65715.1| R2R3 MYB [Iris fulva]
          Length = 404

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 33/73 (45%), Positives = 45/73 (61%)
 Frame = -1

Query: 230 SSGSTINSAANGIELQRGAASFFDNAIFQWSDLTHSSKEAQIQQLESEPEDLKWSEYLQG 51
           SS  +  ++ NGIEL     S+ D  ++ W D+T   KE Q+ Q   EPEDL+WSEYL G
Sbjct: 297 SSSRSSGTSGNGIELPSSNYSY-DGGMYPWLDMTQD-KETQLHQ---EPEDLRWSEYLNG 351

Query: 50  TFSMSAAIHGQNQ 12
            F +SAA+  Q+Q
Sbjct: 352 AFPISAALQNQSQ 364