BLASTX nr result

ID: Dioscorea21_contig00035468 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00035468
         (231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144057.1| PREDICTED: DNA repair protein RAD51 homolog ...   106   2e-21
ref|XP_002273803.1| PREDICTED: DNA repair protein RAD51 homolog ...   100   9e-20
ref|XP_002516197.1| DNA repair protein rad51, putative [Ricinus ...   100   1e-19
ref|XP_003551035.1| PREDICTED: DNA repair protein RAD51 homolog ...    98   6e-19
ref|NP_001233788.1| DNA repair protein RAD51 homolog [Solanum ly...    98   6e-19

>ref|XP_004144057.1| PREDICTED: DNA repair protein RAD51 homolog [Cucumis sativus]
           gi|449518135|ref|XP_004166099.1| PREDICTED: DNA repair
           protein RAD51 homolog [Cucumis sativus]
          Length = 340

 Score =  106 bits (264), Expect = 2e-21
 Identities = 52/58 (89%), Positives = 55/58 (94%)
 Frame = -1

Query: 174 EEQENVDGMQHGPFPVEQLQASGIAAVDVKKLKDAGLCTVESVAYSPRKDLLQIKGIS 1
           EEQE  D +QHGPFPVEQLQASGIAA+DVKKLKDAGLCTVESVAYSPRK+LLQIKGIS
Sbjct: 11  EEQEEADEIQHGPFPVEQLQASGIAAMDVKKLKDAGLCTVESVAYSPRKELLQIKGIS 68


>ref|XP_002273803.1| PREDICTED: DNA repair protein RAD51 homolog [Vitis vinifera]
           gi|297738498|emb|CBI27743.3| unnamed protein product
           [Vitis vinifera]
          Length = 337

 Score =  100 bits (250), Expect = 9e-20
 Identities = 48/58 (82%), Positives = 53/58 (91%)
 Frame = -1

Query: 174 EEQENVDGMQHGPFPVEQLQASGIAAVDVKKLKDAGLCTVESVAYSPRKDLLQIKGIS 1
           +  E V+ MQHGPFPVE LQASGIA++D+KKLKDAGLCTVESVAYSPRKDLLQIKGIS
Sbjct: 8   QAHEEVEDMQHGPFPVEHLQASGIASLDIKKLKDAGLCTVESVAYSPRKDLLQIKGIS 65


>ref|XP_002516197.1| DNA repair protein rad51, putative [Ricinus communis]
           gi|223544683|gb|EEF46199.1| DNA repair protein rad51,
           putative [Ricinus communis]
          Length = 294

 Score =  100 bits (249), Expect = 1e-19
 Identities = 49/58 (84%), Positives = 53/58 (91%)
 Frame = -1

Query: 174 EEQENVDGMQHGPFPVEQLQASGIAAVDVKKLKDAGLCTVESVAYSPRKDLLQIKGIS 1
           + Q  +D MQHGPFPVEQLQ SGIAA+DVKKLKDAGLCTVESVAYSPRK+LLQIKGIS
Sbjct: 12  QPQAELDEMQHGPFPVEQLQESGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGIS 69


>ref|XP_003551035.1| PREDICTED: DNA repair protein RAD51 homolog [Glycine max]
          Length = 343

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 46/58 (79%), Positives = 53/58 (91%)
 Frame = -1

Query: 174 EEQENVDGMQHGPFPVEQLQASGIAAVDVKKLKDAGLCTVESVAYSPRKDLLQIKGIS 1
           ++Q+  + +QHGP PVEQLQASGIAA DVKKLKDAG+CTVESVAY+PRKDLLQIKGIS
Sbjct: 14  QQQDEAEEIQHGPLPVEQLQASGIAATDVKKLKDAGICTVESVAYTPRKDLLQIKGIS 71


>ref|NP_001233788.1| DNA repair protein RAD51 homolog [Solanum lycopersicum]
           gi|2500107|sp|Q40134.1|RAD51_SOLLC RecName: Full=DNA
           repair protein RAD51 homolog gi|1143810|gb|AAC23700.1|
           LeRAD51 [Solanum lycopersicum]
          Length = 342

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 45/58 (77%), Positives = 54/58 (93%)
 Frame = -1

Query: 174 EEQENVDGMQHGPFPVEQLQASGIAAVDVKKLKDAGLCTVESVAYSPRKDLLQIKGIS 1
           ++ + ++ +QHGPFPVEQLQASGIAA+DVKKLKDAGLCTVESV Y+PRK+LLQIKGIS
Sbjct: 13  DQNDEIEDVQHGPFPVEQLQASGIAALDVKKLKDAGLCTVESVVYAPRKELLQIKGIS 70


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