BLASTX nr result
ID: Dioscorea21_contig00035465
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00035465 (362 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EEC74323.1| hypothetical protein OsI_09607 [Oryza sativa Indi... 145 3e-33 ref|NP_001048645.1| Os03g0100400 [Oryza sativa Japonica Group] g... 144 7e-33 ref|XP_003559048.1| PREDICTED: DNA repair endonuclease UVH1-like... 143 2e-32 ref|XP_004148364.1| PREDICTED: DNA repair endonuclease UVH1-like... 141 5e-32 dbj|BAJ99112.1| predicted protein [Hordeum vulgare subsp. vulgare] 140 1e-31 >gb|EEC74323.1| hypothetical protein OsI_09607 [Oryza sativa Indica Group] Length = 959 Score = 145 bits (367), Expect = 3e-33 Identities = 71/120 (59%), Positives = 92/120 (76%) Frame = -1 Query: 362 RVLIADLLFPRAPPGSISSLIILNAHRLSDTSPEAFIARLLRRHSPRASVVALSDRPLPL 183 R L+ADLL R P + +L++L+AHR SDTS +AF+ARLLR H V A SDRP + Sbjct: 109 RALVADLLTSRLLPSRVRALLLLSAHRSSDTSSDAFVARLLRHHH-LLPVYAFSDRPHAM 167 Query: 182 SSGFSKPERILKSLYIKKLHLWPRFHVLVSADLEKDPPEVVDVRVPMTAAMKGVQSAALE 3 SGF+K ER +KSLYI++LHLWPRFH+L +ADLE+ PPEV+DVRVPMT M+G+Q+A L+ Sbjct: 168 VSGFAKAERAMKSLYIRRLHLWPRFHLLAAADLERSPPEVIDVRVPMTQPMRGIQAAILD 227 >ref|NP_001048645.1| Os03g0100400 [Oryza sativa Japonica Group] gi|108705675|gb|ABF93470.1| ERCC4 domain containing protein, expressed [Oryza sativa Japonica Group] gi|113547116|dbj|BAF10559.1| Os03g0100400 [Oryza sativa Japonica Group] gi|215696969|dbj|BAG90963.1| unnamed protein product [Oryza sativa Japonica Group] gi|215768474|dbj|BAH00703.1| unnamed protein product [Oryza sativa Japonica Group] gi|222624006|gb|EEE58138.1| hypothetical protein OsJ_09049 [Oryza sativa Japonica Group] Length = 995 Score = 144 bits (363), Expect = 7e-33 Identities = 70/120 (58%), Positives = 91/120 (75%) Frame = -1 Query: 362 RVLIADLLFPRAPPGSISSLIILNAHRLSDTSPEAFIARLLRRHSPRASVVALSDRPLPL 183 R L+AD L R P + +L++L+AHR SDTS +AF+ARLLR H V A SDRP + Sbjct: 109 RALVADFLTSRLLPSRVRALLLLSAHRSSDTSSDAFVARLLRHHH-LLPVYAFSDRPHAM 167 Query: 182 SSGFSKPERILKSLYIKKLHLWPRFHVLVSADLEKDPPEVVDVRVPMTAAMKGVQSAALE 3 SGF+K ER +KSLYI++LHLWPRFH+L +ADLE+ PPEV+DVRVPMT M+G+Q+A L+ Sbjct: 168 VSGFAKAERAMKSLYIRRLHLWPRFHLLAAADLERSPPEVIDVRVPMTQPMRGIQAAILD 227 >ref|XP_003559048.1| PREDICTED: DNA repair endonuclease UVH1-like [Brachypodium distachyon] Length = 991 Score = 143 bits (360), Expect = 2e-32 Identities = 71/120 (59%), Positives = 91/120 (75%) Frame = -1 Query: 362 RVLIADLLFPRAPPGSISSLIILNAHRLSDTSPEAFIARLLRRHSPRASVVALSDRPLPL 183 RVL ADLL P + +L++L+AHR SDTS +AFIARLLR+H V A SDRP + Sbjct: 113 RVLAADLLTSHLLPSRVQALLLLSAHRSSDTSSDAFIARLLRQHR-LLPVYAFSDRPHAM 171 Query: 182 SSGFSKPERILKSLYIKKLHLWPRFHVLVSADLEKDPPEVVDVRVPMTAAMKGVQSAALE 3 +GF+K ER +KSLYI++LHLWPRFHVL +ADLE+ PPEV+D+RVPMT M G+Q++ LE Sbjct: 172 VAGFAKAERTMKSLYIRRLHLWPRFHVLAAADLERSPPEVIDIRVPMTHPMMGIQASILE 231 >ref|XP_004148364.1| PREDICTED: DNA repair endonuclease UVH1-like [Cucumis sativus] gi|449505229|ref|XP_004162411.1| PREDICTED: DNA repair endonuclease UVH1-like [Cucumis sativus] Length = 1003 Score = 141 bits (356), Expect = 5e-32 Identities = 68/120 (56%), Positives = 90/120 (75%) Frame = -1 Query: 362 RVLIADLLFPRAPPGSISSLIILNAHRLSDTSPEAFIARLLRRHSPRASVVALSDRPLPL 183 R+LI DLL + P +I+ LIILNAH LS+TS EAFI R++R H+ A V SD+P + Sbjct: 106 RILIVDLLTHKLPTSNIAGLIILNAHSLSETSTEAFIVRIIRSHNRNAYVRVFSDKPHAM 165 Query: 182 SSGFSKPERILKSLYIKKLHLWPRFHVLVSADLEKDPPEVVDVRVPMTAAMKGVQSAALE 3 SGF+K ERI+K LY+++LHLWPRF V VS +LE++PP+VVD+RVPMT M G+Q A +E Sbjct: 166 VSGFAKAERIMKCLYVRRLHLWPRFQVNVSEELERNPPDVVDIRVPMTKYMVGIQKAIIE 225 >dbj|BAJ99112.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 998 Score = 140 bits (352), Expect = 1e-31 Identities = 71/120 (59%), Positives = 89/120 (74%) Frame = -1 Query: 362 RVLIADLLFPRAPPGSISSLIILNAHRLSDTSPEAFIARLLRRHSPRASVVALSDRPLPL 183 RVL ADLL P + +L++L AHR SD S +AFIARLLR+H V A SDRP + Sbjct: 117 RVLAADLLTSHLLPSRVRALLLLAAHRSSDVSADAFIARLLRQHR-LLPVYAFSDRPHAM 175 Query: 182 SSGFSKPERILKSLYIKKLHLWPRFHVLVSADLEKDPPEVVDVRVPMTAAMKGVQSAALE 3 +GF+K ER +KSLYI++LHLWPRFHVL +ADLE+ PPEV+DVRVPMT M G+Q+A L+ Sbjct: 176 VAGFAKAERTMKSLYIRRLHLWPRFHVLAAADLERSPPEVIDVRVPMTNPMAGIQAAILD 235