BLASTX nr result

ID: Dioscorea21_contig00035465 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00035465
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC74323.1| hypothetical protein OsI_09607 [Oryza sativa Indi...   145   3e-33
ref|NP_001048645.1| Os03g0100400 [Oryza sativa Japonica Group] g...   144   7e-33
ref|XP_003559048.1| PREDICTED: DNA repair endonuclease UVH1-like...   143   2e-32
ref|XP_004148364.1| PREDICTED: DNA repair endonuclease UVH1-like...   141   5e-32
dbj|BAJ99112.1| predicted protein [Hordeum vulgare subsp. vulgare]    140   1e-31

>gb|EEC74323.1| hypothetical protein OsI_09607 [Oryza sativa Indica Group]
          Length = 959

 Score =  145 bits (367), Expect = 3e-33
 Identities = 71/120 (59%), Positives = 92/120 (76%)
 Frame = -1

Query: 362 RVLIADLLFPRAPPGSISSLIILNAHRLSDTSPEAFIARLLRRHSPRASVVALSDRPLPL 183
           R L+ADLL  R  P  + +L++L+AHR SDTS +AF+ARLLR H     V A SDRP  +
Sbjct: 109 RALVADLLTSRLLPSRVRALLLLSAHRSSDTSSDAFVARLLRHHH-LLPVYAFSDRPHAM 167

Query: 182 SSGFSKPERILKSLYIKKLHLWPRFHVLVSADLEKDPPEVVDVRVPMTAAMKGVQSAALE 3
            SGF+K ER +KSLYI++LHLWPRFH+L +ADLE+ PPEV+DVRVPMT  M+G+Q+A L+
Sbjct: 168 VSGFAKAERAMKSLYIRRLHLWPRFHLLAAADLERSPPEVIDVRVPMTQPMRGIQAAILD 227


>ref|NP_001048645.1| Os03g0100400 [Oryza sativa Japonica Group]
           gi|108705675|gb|ABF93470.1| ERCC4 domain containing
           protein, expressed [Oryza sativa Japonica Group]
           gi|113547116|dbj|BAF10559.1| Os03g0100400 [Oryza sativa
           Japonica Group] gi|215696969|dbj|BAG90963.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215768474|dbj|BAH00703.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222624006|gb|EEE58138.1| hypothetical protein
           OsJ_09049 [Oryza sativa Japonica Group]
          Length = 995

 Score =  144 bits (363), Expect = 7e-33
 Identities = 70/120 (58%), Positives = 91/120 (75%)
 Frame = -1

Query: 362 RVLIADLLFPRAPPGSISSLIILNAHRLSDTSPEAFIARLLRRHSPRASVVALSDRPLPL 183
           R L+AD L  R  P  + +L++L+AHR SDTS +AF+ARLLR H     V A SDRP  +
Sbjct: 109 RALVADFLTSRLLPSRVRALLLLSAHRSSDTSSDAFVARLLRHHH-LLPVYAFSDRPHAM 167

Query: 182 SSGFSKPERILKSLYIKKLHLWPRFHVLVSADLEKDPPEVVDVRVPMTAAMKGVQSAALE 3
            SGF+K ER +KSLYI++LHLWPRFH+L +ADLE+ PPEV+DVRVPMT  M+G+Q+A L+
Sbjct: 168 VSGFAKAERAMKSLYIRRLHLWPRFHLLAAADLERSPPEVIDVRVPMTQPMRGIQAAILD 227


>ref|XP_003559048.1| PREDICTED: DNA repair endonuclease UVH1-like [Brachypodium
           distachyon]
          Length = 991

 Score =  143 bits (360), Expect = 2e-32
 Identities = 71/120 (59%), Positives = 91/120 (75%)
 Frame = -1

Query: 362 RVLIADLLFPRAPPGSISSLIILNAHRLSDTSPEAFIARLLRRHSPRASVVALSDRPLPL 183
           RVL ADLL     P  + +L++L+AHR SDTS +AFIARLLR+H     V A SDRP  +
Sbjct: 113 RVLAADLLTSHLLPSRVQALLLLSAHRSSDTSSDAFIARLLRQHR-LLPVYAFSDRPHAM 171

Query: 182 SSGFSKPERILKSLYIKKLHLWPRFHVLVSADLEKDPPEVVDVRVPMTAAMKGVQSAALE 3
            +GF+K ER +KSLYI++LHLWPRFHVL +ADLE+ PPEV+D+RVPMT  M G+Q++ LE
Sbjct: 172 VAGFAKAERTMKSLYIRRLHLWPRFHVLAAADLERSPPEVIDIRVPMTHPMMGIQASILE 231


>ref|XP_004148364.1| PREDICTED: DNA repair endonuclease UVH1-like [Cucumis sativus]
           gi|449505229|ref|XP_004162411.1| PREDICTED: DNA repair
           endonuclease UVH1-like [Cucumis sativus]
          Length = 1003

 Score =  141 bits (356), Expect = 5e-32
 Identities = 68/120 (56%), Positives = 90/120 (75%)
 Frame = -1

Query: 362 RVLIADLLFPRAPPGSISSLIILNAHRLSDTSPEAFIARLLRRHSPRASVVALSDRPLPL 183
           R+LI DLL  + P  +I+ LIILNAH LS+TS EAFI R++R H+  A V   SD+P  +
Sbjct: 106 RILIVDLLTHKLPTSNIAGLIILNAHSLSETSTEAFIVRIIRSHNRNAYVRVFSDKPHAM 165

Query: 182 SSGFSKPERILKSLYIKKLHLWPRFHVLVSADLEKDPPEVVDVRVPMTAAMKGVQSAALE 3
            SGF+K ERI+K LY+++LHLWPRF V VS +LE++PP+VVD+RVPMT  M G+Q A +E
Sbjct: 166 VSGFAKAERIMKCLYVRRLHLWPRFQVNVSEELERNPPDVVDIRVPMTKYMVGIQKAIIE 225


>dbj|BAJ99112.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 998

 Score =  140 bits (352), Expect = 1e-31
 Identities = 71/120 (59%), Positives = 89/120 (74%)
 Frame = -1

Query: 362 RVLIADLLFPRAPPGSISSLIILNAHRLSDTSPEAFIARLLRRHSPRASVVALSDRPLPL 183
           RVL ADLL     P  + +L++L AHR SD S +AFIARLLR+H     V A SDRP  +
Sbjct: 117 RVLAADLLTSHLLPSRVRALLLLAAHRSSDVSADAFIARLLRQHR-LLPVYAFSDRPHAM 175

Query: 182 SSGFSKPERILKSLYIKKLHLWPRFHVLVSADLEKDPPEVVDVRVPMTAAMKGVQSAALE 3
            +GF+K ER +KSLYI++LHLWPRFHVL +ADLE+ PPEV+DVRVPMT  M G+Q+A L+
Sbjct: 176 VAGFAKAERTMKSLYIRRLHLWPRFHVLAAADLERSPPEVIDVRVPMTNPMAGIQAAILD 235