BLASTX nr result

ID: Dioscorea21_contig00035444 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00035444
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279249.2| PREDICTED: NF-X1-type zinc finger protein NF...    92   4e-17
emb|CBI15612.3| unnamed protein product [Vitis vinifera]               92   4e-17
ref|XP_003532547.1| PREDICTED: NF-X1-type zinc finger protein NF...    89   5e-16
ref|XP_002329754.1| predicted protein [Populus trichocarpa] gi|2...    81   8e-14
ref|XP_002533849.1| nuclear transcription factor, X-box binding,...    78   9e-13

>ref|XP_002279249.2| PREDICTED: NF-X1-type zinc finger protein NFXL1-like [Vitis vinifera]
          Length = 1850

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 56/137 (40%), Positives = 72/137 (52%), Gaps = 6/137 (4%)
 Frame = +3

Query: 3    GYCDSIRDVNIFEDHIFRAIGEFVSLEDRDPVPPNLLEDRLIVTGNLDREGTAFLTVTEN 182
            GYCD+IRD + FED I R IGEF++LE+ D       E R+IV GN   +G A + + E 
Sbjct: 1670 GYCDNIRDTDDFEDQIIRCIGEFIALEENDLESLTSPEGRMIVVGNPMLDGNALVPIPEM 1729

Query: 183  TS------IDNNSDQVDEESPKTGSEHSQILPSTTGRRKVRFLLPPDSPQMRPSXXXXXX 344
             S      + NN  Q    S    S  + +      RRKVRF+LPP+SP+M+ S      
Sbjct: 1730 NSNLASPRLSNNGTQRTLSSDSIESASALVT-----RRKVRFMLPPESPRMQVSVRAELR 1784

Query: 345  XXXXAREHGMTYILGQS 395
                ARE G  Y LGQS
Sbjct: 1785 ELVDARESGTAYFLGQS 1801


>emb|CBI15612.3| unnamed protein product [Vitis vinifera]
          Length = 798

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 56/137 (40%), Positives = 72/137 (52%), Gaps = 6/137 (4%)
 Frame = +3

Query: 3    GYCDSIRDVNIFEDHIFRAIGEFVSLEDRDPVPPNLLEDRLIVTGNLDREGTAFLTVTEN 182
            GYCD+IRD + FED I R IGEF++LE+ D       E R+IV GN   +G A + + E 
Sbjct: 613  GYCDNIRDTDDFEDQIIRCIGEFIALEENDLESLTSPEGRMIVVGNPMLDGNALVPIPEM 672

Query: 183  TS------IDNNSDQVDEESPKTGSEHSQILPSTTGRRKVRFLLPPDSPQMRPSXXXXXX 344
             S      + NN  Q    S    S  + +      RRKVRF+LPP+SP+M+ S      
Sbjct: 673  NSNLASPRLSNNGTQRTLSSDSIESASALVT-----RRKVRFMLPPESPRMQVSVRAELR 727

Query: 345  XXXXAREHGMTYILGQS 395
                ARE G  Y LGQS
Sbjct: 728  ELVDARESGTAYFLGQS 744


>ref|XP_003532547.1| PREDICTED: NF-X1-type zinc finger protein NFXL1-like [Glycine max]
          Length = 1815

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 53/133 (39%), Positives = 76/133 (57%), Gaps = 2/133 (1%)
 Frame = +3

Query: 3    GYCDSIRDVNIFEDHIFRAIGEFVSLEDRDPVPPNLLEDRLIVTGNLDR--EGTAFLTVT 176
            GYCD IRD   FE+ I R+IGEF+S+E  D       ++R+I+ GN +   +G A + + 
Sbjct: 1638 GYCDHIRDTGHFEEQIIRSIGEFISIEQNDIESMVSPDERMIIIGNSNSRLDGNALVPLD 1697

Query: 177  ENTSIDNNSDQVDEESPKTGSEHSQILPSTTGRRKVRFLLPPDSPQMRPSXXXXXXXXXX 356
            E   +D++S  V+ ES  +  +H   L S   R+KVRF+LP +SP+M+ S          
Sbjct: 1698 E---VDSSSCMVNNESQISPVDH-DALESRNKRKKVRFMLPENSPKMQVSVRKELLELID 1753

Query: 357  AREHGMTYILGQS 395
            ARE G  Y LGQS
Sbjct: 1754 ARESGSAYFLGQS 1766


>ref|XP_002329754.1| predicted protein [Populus trichocarpa] gi|222870662|gb|EEF07793.1|
           predicted protein [Populus trichocarpa]
          Length = 757

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 47/131 (35%), Positives = 69/131 (52%)
 Frame = +3

Query: 3   GYCDSIRDVNIFEDHIFRAIGEFVSLEDRDPVPPNLLEDRLIVTGNLDREGTAFLTVTEN 182
           GYCD IRD + FE+ I  +IGEF+SLE+ D       E R+++ G    +  A + + + 
Sbjct: 578 GYCDQIRDTDDFEEQIISSIGEFISLEESDCESLTSPEGRMMIVGKPLVDRNALIPMHDT 637

Query: 183 TSIDNNSDQVDEESPKTGSEHSQILPSTTGRRKVRFLLPPDSPQMRPSXXXXXXXXXXAR 362
           TS   +++  + E+  +  E      +   R+KVRFL+P  SP+MR S          AR
Sbjct: 638 TSFAGSTNIANNETLASPLEDLIERKTPVRRKKVRFLMPEGSPRMRVSVREELQELIDAR 697

Query: 363 EHGMTYILGQS 395
           E G  Y LGQS
Sbjct: 698 ESGTAYFLGQS 708


>ref|XP_002533849.1| nuclear transcription factor, X-box binding, putative [Ricinus
            communis] gi|223526207|gb|EEF28532.1| nuclear
            transcription factor, X-box binding, putative [Ricinus
            communis]
          Length = 1745

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 44/131 (33%), Positives = 67/131 (51%)
 Frame = +3

Query: 3    GYCDSIRDVNIFEDHIFRAIGEFVSLEDRDPVPPNLLEDRLIVTGNLDREGTAFLTVTEN 182
            GYCDS+RD + FE  I   IG+F+SLE+ D    N  E R+++ G    EG A + +  +
Sbjct: 1571 GYCDSVRDTDDFEQQIICCIGDFISLEENDQESLNSPEGRMMIVGKPSPEGKALIPLHGS 1630

Query: 183  TSIDNNSDQVDEESPKTGSEHSQILPSTTGRRKVRFLLPPDSPQMRPSXXXXXXXXXXAR 362
             S   + +  ++++       + +      R+KVRF+LP +SP+M             AR
Sbjct: 1631 CSTLGHPNMENDQTHVVSPGRNPVT-----RKKVRFMLPANSPKMLKPVREELQELVNAR 1685

Query: 363  EHGMTYILGQS 395
            E G  Y LGQS
Sbjct: 1686 ESGTAYFLGQS 1696


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