BLASTX nr result

ID: Dioscorea21_contig00035432 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00035432
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304251.1| predicted protein [Populus trichocarpa] gi|2...    78   7e-13
ref|NP_001183875.1| uncharacterized protein LOC100502468 [Zea ma...    76   3e-12
ref|XP_002534004.1| conserved hypothetical protein [Ricinus comm...    74   2e-11
ref|NP_001143024.1| uncharacterized protein LOC100275491 [Zea ma...    74   2e-11
ref|XP_002331220.1| predicted protein [Populus trichocarpa] gi|2...    73   3e-11

>ref|XP_002304251.1| predicted protein [Populus trichocarpa] gi|222841683|gb|EEE79230.1|
           predicted protein [Populus trichocarpa]
          Length = 130

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 40/76 (52%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
 Frame = +1

Query: 115 GLQIVIQHQNQNSNIVTKHILKAPQV-VQQSSSHFGFLNSCHLCKRKLSLQMDVYMYRGD 291
           GLQ ++  +   SN+VTK  LK  ++ VQ SS  + +L SC+LC + LSL  DVYMYRGD
Sbjct: 4   GLQSLLL-EGDISNVVTKSALKTHRLQVQASSIKYCYLKSCYLCNKILSLDKDVYMYRGD 62

Query: 292 QGYCTPECRSRQMIID 339
           QG+C+ ECR+RQ+I+D
Sbjct: 63  QGFCSIECRNRQIILD 78


>ref|NP_001183875.1| uncharacterized protein LOC100502468 [Zea mays]
           gi|238015176|gb|ACR38623.1| unknown [Zea mays]
           gi|414870280|tpg|DAA48837.1| TPA: hypothetical protein
           ZEAMMB73_483336 [Zea mays]
          Length = 186

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 37/98 (37%), Positives = 58/98 (59%), Gaps = 13/98 (13%)
 Frame = +1

Query: 85  KAMEEKKSFVGLQIVIQHQNQN-------SNIVTKHILKAPQVVQQSSSH------FGFL 225
           +A E ++  VGLQI++ H  ++       +N+V K +++          H        FL
Sbjct: 43  RARERERLVVGLQILVHHHGRHGHGHAHAANVVLKQMVRPRAAAGSRHGHGSHAFSCSFL 102

Query: 226 NSCHLCKRKLSLQMDVYMYRGDQGYCTPECRSRQMIID 339
            +C+LCKR+LS   DVYMYRGDQG+C+ ECR +Q+++D
Sbjct: 103 KACYLCKRELSPDKDVYMYRGDQGFCSEECRWQQILVD 140


>ref|XP_002534004.1| conserved hypothetical protein [Ricinus communis]
           gi|223525994|gb|EEF28375.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 155

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 37/83 (44%), Positives = 52/83 (62%), Gaps = 7/83 (8%)
 Frame = +1

Query: 112 VGLQIVIQ--HQNQNSNIVTKHIL-KAPQVVQQSSSHFG----FLNSCHLCKRKLSLQMD 270
           VGLQ ++        SN+VTK  + KAP    +   H      +L +CHLC + LSL  D
Sbjct: 19  VGLQTLVHVSEGKSKSNVVTKSAMRKAPHHRHRRPHHQSTESCYLKTCHLCNKNLSLDKD 78

Query: 271 VYMYRGDQGYCTPECRSRQMIID 339
           +YMYRGDQG+C+ ECR+RQ+++D
Sbjct: 79  IYMYRGDQGFCSIECRNRQIVLD 101


>ref|NP_001143024.1| uncharacterized protein LOC100275491 [Zea mays]
           gi|195613094|gb|ACG28377.1| hypothetical protein [Zea
           mays]
          Length = 190

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 39/104 (37%), Positives = 61/104 (58%), Gaps = 19/104 (18%)
 Frame = +1

Query: 85  KAMEEKKSFVGLQIVIQHQNQN---------SNIVTKHILKAPQVVQQSS-------SHF 216
           +A E ++  VGLQI++ H +           +N+V K +++    V  ++       SH 
Sbjct: 41  RARERERLVVGLQILVHHHHHGRHGHGHAHAANVVLKQMVRPRAAVAAAAGSRHGHGSHA 100

Query: 217 ---GFLNSCHLCKRKLSLQMDVYMYRGDQGYCTPECRSRQMIID 339
               FL +C+LCKR+LS   DVYMYRGDQG+C+ ECR +Q+++D
Sbjct: 101 FSCSFLKACYLCKRELSPDKDVYMYRGDQGFCSEECRWQQILVD 144


>ref|XP_002331220.1| predicted protein [Populus trichocarpa] gi|222873341|gb|EEF10472.1|
           predicted protein [Populus trichocarpa]
          Length = 104

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 32/64 (50%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
 Frame = +1

Query: 151 SNIVTKHILKAPQV-VQQSSSHFGFLNSCHLCKRKLSLQMDVYMYRGDQGYCTPECRSRQ 327
           SN+VTK  LK  ++ VQ ++  + +L SC+LC + LS   D+YMYRGDQG+C+ ECR+RQ
Sbjct: 1   SNVVTKSALKTQRLRVQATTIEYCYLISCNLCNKMLSPDKDIYMYRGDQGFCSTECRNRQ 60

Query: 328 MIID 339
           +++D
Sbjct: 61  IVLD 64


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