BLASTX nr result
ID: Dioscorea21_contig00035371
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00035371
(543 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera] 211 7e-53
ref|XP_002280683.1| PREDICTED: pentatricopeptide repeat-containi... 209 2e-52
ref|XP_004143130.1| PREDICTED: pentatricopeptide repeat-containi... 209 2e-52
ref|XP_003539074.1| PREDICTED: pentatricopeptide repeat-containi... 202 3e-50
ref|XP_003606718.1| Pentatricopeptide repeat-containing protein ... 201 5e-50
>emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
Length = 1321
Score = 211 bits (536), Expect = 7e-53
Identities = 97/179 (54%), Positives = 133/179 (74%)
Frame = -2
Query: 539 NSMISGYASLGLLENAMDLFVLMKSSGTKPDLLTWNALISGFSRAGDVEMVLDLFSLMQA 360
N+M+SGYA G + A++L M+ +G KP++++WN LI+GFS+ GD MV ++F LM A
Sbjct: 974 NAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTA 1033
Query: 359 DGIRPDVFSWTSIISGLVGNFRYKRALQVFKQMVVAGVHPNSVTISSILPACAIAADLRH 180
+G+ PDV SWTS+ISG V NF FK+M+ G P+SVTISS+LPAC A+LRH
Sbjct: 1034 NGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRH 1093
Query: 179 GKEMHAHSLVIGAADDLHVNSALIDMYAKCGLISDAGLIFNSMRERNSVSWNSMIFGYA 3
GKE+H +++VIG D++V SAL+DMYAKCG IS+A ++F M ERN+V+WNS+IFGYA
Sbjct: 1094 GKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYA 1152
Score = 90.1 bits (222), Expect = 2e-16
Identities = 45/152 (29%), Positives = 84/152 (55%)
Frame = -2
Query: 461 GTKPDLLTWNALISGFSRAGDVEMVLDLFSLMQADGIRPDVFSWTSIISGLVGNFRYKRA 282
G D +LI +++ G+V+ + ++ M + D + +IS N + +A
Sbjct: 143 GLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTS----LDAATCNCLISAYARNGFFVQA 198
Query: 281 LQVFKQMVVAGVHPNSVTISSILPACAIAADLRHGKEMHAHSLVIGAADDLHVNSALIDM 102
QVF Q+ G PN T S++L C + ++ GK++HAH + + + V +AL+ +
Sbjct: 199 FQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTL 258
Query: 101 YAKCGLISDAGLIFNSMRERNSVSWNSMIFGY 6
Y+KCG++ +A ++F S+R+RN +SW + I G+
Sbjct: 259 YSKCGMMEEAEIVFESLRQRNIISWTASINGF 290
Score = 89.7 bits (221), Expect = 3e-16
Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 36/214 (16%)
Frame = -2
Query: 539 NSMISGYASLGLLENAMDLFVLMKSSGTKPDLLTW------------------------- 435
N +IS YA G A +F+ + + GT+P+ T+
Sbjct: 183 NCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVK 242
Query: 434 ----------NALISGFSRAGDVEMVLDLFSLMQADGIRPDVFSWTSIISGLVGNFRYKR 285
NAL++ +S+ G +E +F ++ + ++ SWT+ I+G + +K+
Sbjct: 243 MQYLSETAVGNALLTLYSKCGMMEEAEIVFESLR----QRNIISWTASINGFYQHGDFKK 298
Query: 284 ALQVFKQMVVAGVHPNSVTISSILPACAIAADLRHGKEMHAHSLVIGAADDLHVNSALID 105
AL+ F M +G+ PN T S +L +C D G+ H + G A + V +A+ID
Sbjct: 299 ALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVGTAIID 358
Query: 104 MYAKCGLISDAGLIFNSM-RERNSVSWNSMIFGY 6
MY+ G + +A F M R ++VSWN++I GY
Sbjct: 359 MYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGY 392
Score = 82.4 bits (202), Expect = 4e-14
Identities = 55/215 (25%), Positives = 98/215 (45%), Gaps = 35/215 (16%)
Frame = -2
Query: 542 WNSMISGYASLGLLENAMDLFVLMKSSGTKPDLLTWN----------------------- 432
W + I+G+ G + A+ F +M+ SG +P+ T++
Sbjct: 283 WTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVI 342
Query: 431 ------------ALISGFSRAGDVEMVLDLFSLMQADGIRPDVFSWTSIISGLVGNFRYK 288
A+I +S G+++ F M G SW ++I+G V N + +
Sbjct: 343 KKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQM---GRAASNVSWNALIAGYVLNEKIE 399
Query: 287 RALQVFKQMVVAGVHPNSVTISSILPACAIAADLRHGKEMHAHSLVIGAADDLHVNSALI 108
+A++ F +MV V N T S+I AC+ L ++H+ + +LHV S+LI
Sbjct: 400 KAMEAFCRMVKEDVACNEFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLI 459
Query: 107 DMYAKCGLISDAGLIFNSMRERNSVSWNSMIFGYA 3
+ Y +CG + +A +F + + + VSWNS+I Y+
Sbjct: 460 EAYTQCGSLENAVQVFTQISDADVVSWNSIIKAYS 494
Score = 75.1 bits (183), Expect = 6e-12
Identities = 45/142 (31%), Positives = 69/142 (48%)
Frame = -2
Query: 428 LISGFSRAGDVEMVLDLFSLMQADGIRPDVFSWTSIISGLVGNFRYKRALQVFKQMVVAG 249
L+S ++ G + LF + IR W + Y+ AL F +M G
Sbjct: 844 LMSFYTECGQLSNARKLFDKIPNTNIR----RWIVLTGACARRGFYEEALSAFSEMQKEG 899
Query: 248 VHPNSVTISSILPACAIAADLRHGKEMHAHSLVIGAADDLHVNSALIDMYAKCGLISDAG 69
+ PN + SIL AC +D R G+ MH L D ++ SALI MY+KCG + A
Sbjct: 900 LRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKAC 959
Query: 68 LIFNSMRERNSVSWNSMIFGYA 3
+F+ + +++ V N+M+ GYA
Sbjct: 960 RVFDWIVDKDLVVMNAMVSGYA 981
Score = 58.2 bits (139), Expect = 8e-07
Identities = 49/168 (29%), Positives = 79/168 (47%), Gaps = 1/168 (0%)
Frame = -2
Query: 542 WNSMISGYASLGLLENAMDLFVLMKSSGTKPDLLTWNALISGFSRAGDVEMVLDLFSLMQ 363
WNS+I GYA+ G A++LF M+ S TK D LT+ A+++ S AG VE+ LF MQ
Sbjct: 1144 WNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXKMQ 1203
Query: 362 AD-GIRPDVFSWTSIISGLVGNFRYKRALQVFKQMVVAGVHPNSVTISSILPACAIAADL 186
I P + + ++ L + A + K M V P+ ++L AC ++
Sbjct: 1204 EKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAM---PVEPDKFVWGALLGACRNHGNI 1260
Query: 185 RHGKEMHAHSLVIGAADDLHVNSALIDMYAKCGLISDAGLIFNSMRER 42
E+ A L + + L ++YA G +A + M++R
Sbjct: 1261 ELA-EVAAEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQR 1307
>ref|XP_002280683.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Vitis vinifera]
Length = 545
Score = 209 bits (533), Expect = 2e-52
Identities = 97/179 (54%), Positives = 133/179 (74%)
Frame = -2
Query: 539 NSMISGYASLGLLENAMDLFVLMKSSGTKPDLLTWNALISGFSRAGDVEMVLDLFSLMQA 360
N+M+SGYA G + A++L M+ +G KP++++WN LI+GFS+ GD MV ++F LM A
Sbjct: 198 NAMVSGYAQHGFVHEALNLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTA 257
Query: 359 DGIRPDVFSWTSIISGLVGNFRYKRALQVFKQMVVAGVHPNSVTISSILPACAIAADLRH 180
+G+ PDV SWTS+ISG V NF FK+M+ G P+SVTISS+LPAC A+LRH
Sbjct: 258 NGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRH 317
Query: 179 GKEMHAHSLVIGAADDLHVNSALIDMYAKCGLISDAGLIFNSMRERNSVSWNSMIFGYA 3
GKE+H +++VIG D++V SAL+DMYAKCG IS+A ++F M ERN+V+WNS+IFGYA
Sbjct: 318 GKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYA 376
Score = 75.1 bits (183), Expect = 6e-12
Identities = 45/142 (31%), Positives = 69/142 (48%)
Frame = -2
Query: 428 LISGFSRAGDVEMVLDLFSLMQADGIRPDVFSWTSIISGLVGNFRYKRALQVFKQMVVAG 249
L+S ++ G + LF + IR W + Y+ AL F +M G
Sbjct: 68 LMSFYTECGQLSNARKLFDKIPNTNIR----RWIVLTGACARRGFYEEALSAFSEMQKEG 123
Query: 248 VHPNSVTISSILPACAIAADLRHGKEMHAHSLVIGAADDLHVNSALIDMYAKCGLISDAG 69
+ PN + SIL AC +D R G+ MH L D ++ SALI MY+KCG + A
Sbjct: 124 LRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKAC 183
Query: 68 LIFNSMRERNSVSWNSMIFGYA 3
+F+ + +++ V N+M+ GYA
Sbjct: 184 RVFDWIVDKDLVVMNAMVSGYA 205
Score = 58.2 bits (139), Expect = 8e-07
Identities = 49/168 (29%), Positives = 79/168 (47%), Gaps = 1/168 (0%)
Frame = -2
Query: 542 WNSMISGYASLGLLENAMDLFVLMKSSGTKPDLLTWNALISGFSRAGDVEMVLDLFSLMQ 363
WNS+I GYA+ G A++LF M+ S TK D LT+ A+++ S AG VE+ LF MQ
Sbjct: 368 WNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFRKMQ 427
Query: 362 AD-GIRPDVFSWTSIISGLVGNFRYKRALQVFKQMVVAGVHPNSVTISSILPACAIAADL 186
I P + + ++ L + A + K M V P+ ++L AC ++
Sbjct: 428 EKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAM---PVEPDKFVWGALLGACRNHGNI 484
Query: 185 RHGKEMHAHSLVIGAADDLHVNSALIDMYAKCGLISDAGLIFNSMRER 42
E+ A L + + L ++YA G +A + M++R
Sbjct: 485 ELA-EVAAEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQR 531
>ref|XP_004143130.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Cucumis sativus]
gi|449496662|ref|XP_004160192.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g59600-like [Cucumis sativus]
Length = 547
Score = 209 bits (532), Expect = 2e-52
Identities = 100/179 (55%), Positives = 131/179 (73%)
Frame = -2
Query: 539 NSMISGYASLGLLENAMDLFVLMKSSGTKPDLLTWNALISGFSRAGDVEMVLDLFSLMQA 360
N+M+SGYA GL E A++L M+ G KP+L+TWN L++GFS+ G+ EMV +LF M+A
Sbjct: 199 NAMVSGYAHHGLAEEALNLVEEMQVLGIKPNLVTWNTLVTGFSQIGEEEMVRELFKEMEA 258
Query: 359 DGIRPDVFSWTSIISGLVGNFRYKRALQVFKQMVVAGVHPNSVTISSILPACAIAADLRH 180
+GI PDV SWTS+ISG V NFR + A F++M+ AG HP S TISS+LPACA + R
Sbjct: 259 NGIEPDVVSWTSVISGFVQNFRNEEAFDTFRRMLNAGFHPTSATISSLLPACASVGNGRC 318
Query: 179 GKEMHAHSLVIGAADDLHVNSALIDMYAKCGLISDAGLIFNSMRERNSVSWNSMIFGYA 3
GKE+H HSL +G D++V +AL+DMYAKCG +A ++F M ERNS +WNSMIFGYA
Sbjct: 319 GKEIHGHSLALGVEKDVYVRTALVDMYAKCGYFYEAKILFWRMSERNSATWNSMIFGYA 377
Score = 69.7 bits (169), Expect = 3e-10
Identities = 39/110 (35%), Positives = 58/110 (52%)
Frame = -2
Query: 332 WTSIISGLVGNFRYKRALQVFKQMVVAGVHPNSVTISSILPACAIAADLRHGKEMHAHSL 153
W +I Y AL VF ++ G+ P+ I S+L AC ++ G+++H L
Sbjct: 97 WIVLIGAYSRCGYYPEALSVFCELQRGGLRPSEYIIPSVLKACGHLSEKTTGRKLHTLIL 156
Query: 152 VIGAADDLHVNSALIDMYAKCGLISDAGLIFNSMRERNSVSWNSMIFGYA 3
D +V SALIDMYAK G + A +F SM ++ V+ N+M+ GYA
Sbjct: 157 KNSLESDAYVCSALIDMYAKSGEVEKARRVFESMAGKDLVALNAMVSGYA 206
Score = 56.6 bits (135), Expect = 2e-06
Identities = 47/156 (30%), Positives = 75/156 (48%), Gaps = 4/156 (2%)
Frame = -2
Query: 542 WNSMISGYASLGLLENAMDLFVLMKSSGTKP-DLLTWNALISGFSRAGDVEMVLDLFSLM 366
WNSMI GYA+ G A++LF MK K D LT+ A+++ + AG V++ LF LM
Sbjct: 369 WNSMIFGYANHGYCNEAIELFHQMKDDDEKKLDHLTFTAILTACAHAGLVDLGRSLFQLM 428
Query: 365 QAD-GIRPDVFSWTSIISGLVGNFRYKRALQVFKQMVVAGVHPNSVTISSILPACAIAAD 189
Q+ GI P V + ++ + A + K M V P+ ++L AC +
Sbjct: 429 QSKYGIVPRVEHYACMVDVFGRAGKLAEAYDLIKTM---PVKPDLYVWGALLGACRKHGE 485
Query: 188 LRHGKEMHAHSLVIGAADDLHVNSALI--DMYAKCG 87
+ +E H + + V ++L+ D+YA G
Sbjct: 486 IELAEEAAKH---LSELEPGSVGNSLLLSDIYANAG 518
>ref|XP_003539074.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Glycine max]
Length = 548
Score = 202 bits (514), Expect = 3e-50
Identities = 96/179 (53%), Positives = 129/179 (72%)
Frame = -2
Query: 539 NSMISGYASLGLLENAMDLFVLMKSSGTKPDLLTWNALISGFSRAGDVEMVLDLFSLMQA 360
N++++GY G A+ L MK G KP+++TWN+LISGFS+ GD V ++F LM A
Sbjct: 200 NAVVAGYVQQGAANEALGLVESMKLMGLKPNVVTWNSLISGFSQKGDQGRVSEIFRLMIA 259
Query: 359 DGIRPDVFSWTSIISGLVGNFRYKRALQVFKQMVVAGVHPNSVTISSILPACAIAADLRH 180
DG+ PDV SWTS+ISG V NFR K A FKQM+ G HP S TIS++LPACA AA +
Sbjct: 260 DGVEPDVVSWTSVISGFVQNFRNKEAFDTFKQMLSHGFHPTSATISALLPACATAARVSV 319
Query: 179 GKEMHAHSLVIGAADDLHVNSALIDMYAKCGLISDAGLIFNSMRERNSVSWNSMIFGYA 3
G+E+H ++LV G D++V SAL+DMYAKCG IS+A +F+ M E+N+V+WNS+IFG+A
Sbjct: 320 GREIHGYALVTGVEGDIYVRSALVDMYAKCGFISEARNLFSRMPEKNTVTWNSIIFGFA 378
Score = 68.9 bits (167), Expect = 5e-10
Identities = 45/143 (31%), Positives = 72/143 (50%), Gaps = 2/143 (1%)
Frame = -2
Query: 428 LISGFSRAGDVEMVLDLFSLMQADGIRPDVFSWTSIISGLVGNFRYKRALQVFKQM-VVA 252
L+S ++ G + LF + +R W ++I Y AL VF +M V
Sbjct: 68 LVSFYTCCGQLSHARKLFDKIPTTNVR----RWIALIGSCARCGFYDHALAVFSEMQAVQ 123
Query: 251 GVHPNSV-TISSILPACAIAADLRHGKEMHAHSLVIGAADDLHVNSALIDMYAKCGLISD 75
G+ PN V I S+L AC D G+++H L D V+S+LI MY+KC + D
Sbjct: 124 GLTPNYVFVIPSVLKACGHVGDRITGEKIHGFILKCSFELDSFVSSSLIVMYSKCAKVED 183
Query: 74 AGLIFNSMRERNSVSWNSMIFGY 6
A +F+ M +++V+ N+++ GY
Sbjct: 184 ARKVFDGMTVKDTVALNAVVAGY 206
>ref|XP_003606718.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507773|gb|AES88915.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 550
Score = 201 bits (512), Expect = 5e-50
Identities = 98/179 (54%), Positives = 129/179 (72%)
Frame = -2
Query: 539 NSMISGYASLGLLENAMDLFVLMKSSGTKPDLLTWNALISGFSRAGDVEMVLDLFSLMQA 360
N+++SGYA GL A+ L MK G P+++TWNALISGF++ D EMV ++F LM
Sbjct: 202 NAVVSGYAQQGLPNEALSLVENMKLMGVNPNVVTWNALISGFAQKCDREMVSEIFRLMNE 261
Query: 359 DGIRPDVFSWTSIISGLVGNFRYKRALQVFKQMVVAGVHPNSVTISSILPACAIAADLRH 180
D + PDV SWTS++SG V NFR + A FK+M++ G P S TIS++LPACA A +R
Sbjct: 262 DRVEPDVVSWTSVLSGFVQNFRNEEAFDAFKKMLLLGFCPTSATISALLPACATEARVRF 321
Query: 179 GKEMHAHSLVIGAADDLHVNSALIDMYAKCGLISDAGLIFNSMRERNSVSWNSMIFGYA 3
GKE+H ++LVIG DDL+V SAL+DMYAKCG IS+A +F M E+N+V+ NSMIFGYA
Sbjct: 322 GKEIHGYALVIGVEDDLYVRSALVDMYAKCGFISEARTLFYKMPEKNTVTMNSMIFGYA 380
Score = 70.1 bits (170), Expect = 2e-10
Identities = 51/179 (28%), Positives = 89/179 (49%), Gaps = 2/179 (1%)
Frame = -2
Query: 533 MISGYASLGLLENAMDLFVLMKSSGTKPDLLTWNALISGFSRAGDVEMVLDLFSLMQADG 354
+I Y L+ L L+ ++G L + LI+ ++ G + + LF +
Sbjct: 35 LIETYTHSRSLQQGKKLHALLTTNGYVRFNLIASNLITLYTTCGQLSIARKLFDKIP--- 91
Query: 353 IRPDVFSWTSIISGLVGNFRYKRALQVFKQM-VVAGVHPNSV-TISSILPACAIAADLRH 180
+ ++ W ++I+ + AL+VF +M + NSV I S+L AC D +
Sbjct: 92 -QTNIHRWIALIATCARCGFHDHALEVFSEMQTLNDQKSNSVFVIPSVLKACGHVGDRIY 150
Query: 179 GKEMHAHSLVIGAADDLHVNSALIDMYAKCGLISDAGLIFNSMRERNSVSWNSMIFGYA 3
G+++H L D V+SALI MY+KCG + DA +F+ M ++ V+ N+++ GYA
Sbjct: 151 GEQVHCLVLKCSFEIDAFVSSALIVMYSKCGEVRDARKVFDGMVVKDLVAMNAVVSGYA 209