BLASTX nr result

ID: Dioscorea21_contig00035329 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00035329
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003559462.1| PREDICTED: uncharacterized protein At1g28695...    65   6e-09
ref|XP_003520412.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    62   5e-08
ref|XP_002466515.1| hypothetical protein SORBIDRAFT_01g009150 [S...    60   2e-07
ref|XP_002526480.1| pentatricopeptide repeat-containing protein,...    60   2e-07
ref|XP_002270380.2| PREDICTED: uncharacterized protein At1g28695...    60   2e-07

>ref|XP_003559462.1| PREDICTED: uncharacterized protein At1g28695-like [Brachypodium
           distachyon]
          Length = 371

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 27/48 (56%), Positives = 34/48 (70%)
 Frame = +1

Query: 1   VRTVHANCCRTVKAKLVDLTAALQVWKRFNGTATARWPSHDACRNSWK 144
           V TVHANCCRT++AK+ DL A + V +R N TA  RWP+H  C  SW+
Sbjct: 324 VATVHANCCRTMRAKVSDLRAVIGVARRLNQTAELRWPAHSECAKSWR 371


>ref|XP_003520412.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           At1g28695-like [Glycine max]
          Length = 339

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/58 (48%), Positives = 36/58 (62%), Gaps = 5/58 (8%)
 Frame = +1

Query: 1   VRTVHANCCRTVKAKLVDLTAALQVWKRF-----NGTATARWPSHDACRNSWKKNIVI 159
           V TVHANCCR++ AK VDL A L+ WK+F     N T   RW  H+ CR SW + + +
Sbjct: 280 VITVHANCCRSITAKEVDLKAVLRDWKQFRRLEANSTINTRWTMHNQCRQSWGRPVKV 337


>ref|XP_002466515.1| hypothetical protein SORBIDRAFT_01g009150 [Sorghum bicolor]
           gi|241920369|gb|EER93513.1| hypothetical protein
           SORBIDRAFT_01g009150 [Sorghum bicolor]
          Length = 348

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/48 (58%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
 Frame = +1

Query: 1   VRTVHANCCRTVKAKLVDLTAALQVWKRFNGTAT-ARWPSHDACRNSW 141
           V TVHANCCRT +AK+ DL A L+  KR N T T  RWP+H  C  SW
Sbjct: 300 VATVHANCCRTKRAKVADLKAVLRAAKRLNRTTTELRWPAHRECVKSW 347


>ref|XP_002526480.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534155|gb|EEF35871.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 357

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 8/60 (13%)
 Frame = +1

Query: 1   VRTVHANCCRTVKAKLVDLTAALQVWKRF--------NGTATARWPSHDACRNSWKKNIV 156
           V TVHANCCR++ AK++DL + L+ W R+        NGT   +W  H  C NSW K  V
Sbjct: 298 VATVHANCCRSISAKVLDLRSVLRDWMRYKAAKRVATNGTVAFQWSGHFGCWNSWNKTSV 357


>ref|XP_002270380.2| PREDICTED: uncharacterized protein At1g28695 [Vitis vinifera]
          Length = 341

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 27/52 (51%), Positives = 33/52 (63%), Gaps = 5/52 (9%)
 Frame = +1

Query: 1   VRTVHANCCRTVKAKLVDLTAALQVWKRF-----NGTATARWPSHDACRNSW 141
           V TVHA CCR++ AK+ DLT  L  W RF     N T+T +W SH AC +SW
Sbjct: 290 VTTVHATCCRSIHAKVADLTVVLHDWLRFKNSPTNETSTFQWSSHTACMHSW 341


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