BLASTX nr result
ID: Dioscorea21_contig00035298
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00035298
(235 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003533440.1| PREDICTED: ABC transporter B family member 2... 109 2e-22
ref|XP_003517674.1| PREDICTED: ABC transporter B family member 2... 109 3e-22
ref|XP_003572841.1| PREDICTED: ABC transporter B family member 2... 105 5e-21
gb|EEC73824.1| hypothetical protein OsI_08549 [Oryza sativa Indi... 104 7e-21
ref|NP_001047803.1| Os02g0693700 [Oryza sativa Japonica Group] g... 104 7e-21
>ref|XP_003533440.1| PREDICTED: ABC transporter B family member 2-like [Glycine max]
Length = 1245
Score = 109 bits (273), Expect = 2e-22
Identities = 58/84 (69%), Positives = 67/84 (79%), Gaps = 7/84 (8%)
Frame = +3
Query: 3 VMVGRTTVMIAHRLSTIRNADMIAVVQSGKIIETGTHEQLMSNPRSSYASLVQLQEAASV 182
VMVGRTTV++AHRLSTIRNADMIAVVQ GKI+ETG HE+LM+NP S YASLVQLQEAAS+
Sbjct: 550 VMVGRTTVVVAHRLSTIRNADMIAVVQGGKIVETGNHEELMANPTSVYASLVQLQEAASL 609
Query: 183 HR-------AGAAPSDSHSISMSR 233
HR G PS ++S +SR
Sbjct: 610 HRLPSIGPSMGCQPSITYSRELSR 633
Score = 71.6 bits (174), Expect = 6e-11
Identities = 33/56 (58%), Positives = 42/56 (75%)
Frame = +3
Query: 3 VMVGRTTVMIAHRLSTIRNADMIAVVQSGKIIETGTHEQLMSNPRSSYASLVQLQE 170
+M RTT+M+AHRLSTIRNAD I+V+Q GKII+ GTH L+ N +Y LV LQ+
Sbjct: 1186 LMQNRTTIMVAHRLSTIRNADQISVLQDGKIIDQGTHSSLIENKNGAYYKLVNLQQ 1241
>ref|XP_003517674.1| PREDICTED: ABC transporter B family member 2-like [Glycine max]
Length = 1246
Score = 109 bits (272), Expect = 3e-22
Identities = 58/84 (69%), Positives = 67/84 (79%), Gaps = 7/84 (8%)
Frame = +3
Query: 3 VMVGRTTVMIAHRLSTIRNADMIAVVQSGKIIETGTHEQLMSNPRSSYASLVQLQEAASV 182
VMVGRTTV++AHRLSTIRNADMIAVVQ GKI+ETG HE+LM+NP S YASLVQLQEAAS+
Sbjct: 550 VMVGRTTVVVAHRLSTIRNADMIAVVQGGKIVETGNHEELMANPTSVYASLVQLQEAASL 609
Query: 183 HR-------AGAAPSDSHSISMSR 233
HR G PS ++S +SR
Sbjct: 610 HRLPSIGPSMGRQPSITYSRELSR 633
Score = 72.0 bits (175), Expect = 5e-11
Identities = 34/56 (60%), Positives = 42/56 (75%)
Frame = +3
Query: 3 VMVGRTTVMIAHRLSTIRNADMIAVVQSGKIIETGTHEQLMSNPRSSYASLVQLQE 170
+M RTTVM+AHRLSTIRNAD I+V+Q GKII+ GTH L+ N +Y LV LQ+
Sbjct: 1186 LMQNRTTVMVAHRLSTIRNADQISVLQDGKIIDQGTHSSLIENKNGAYYKLVNLQQ 1241
>ref|XP_003572841.1| PREDICTED: ABC transporter B family member 2-like [Brachypodium
distachyon]
Length = 1256
Score = 105 bits (261), Expect = 5e-21
Identities = 55/77 (71%), Positives = 65/77 (84%)
Frame = +3
Query: 3 VMVGRTTVMIAHRLSTIRNADMIAVVQSGKIIETGTHEQLMSNPRSSYASLVQLQEAASV 182
VMVGRTTV+IAHRLSTIRNAD IAVV +G+I+ETGTHEQLM+NPRS+YASL+QLQEAA +
Sbjct: 549 VMVGRTTVVIAHRLSTIRNADTIAVVDAGRIVETGTHEQLMANPRSAYASLIQLQEAAQL 608
Query: 183 HRAGAAPSDSHSISMSR 233
PS S S S++R
Sbjct: 609 QH---KPSFSDSASITR 622
Score = 70.5 bits (171), Expect = 1e-10
Identities = 33/56 (58%), Positives = 43/56 (76%)
Frame = +3
Query: 3 VMVGRTTVMIAHRLSTIRNADMIAVVQSGKIIETGTHEQLMSNPRSSYASLVQLQE 170
VM RTTV++AHRLSTI+NAD+I+V+Q GKIIE G H+ L+ N +Y LV LQ+
Sbjct: 1189 VMKNRTTVIVAHRLSTIKNADVISVLQDGKIIEQGDHQHLIENKNGAYHKLVNLQQ 1244
>gb|EEC73824.1| hypothetical protein OsI_08549 [Oryza sativa Indica Group]
Length = 1264
Score = 104 bits (260), Expect = 7e-21
Identities = 55/74 (74%), Positives = 64/74 (86%)
Frame = +3
Query: 3 VMVGRTTVMIAHRLSTIRNADMIAVVQSGKIIETGTHEQLMSNPRSSYASLVQLQEAASV 182
VMVGRTTV+IAHRLSTIRNAD IAVV SG+I+ETGTHEQLM+NPRS+YASL+QLQEAA +
Sbjct: 560 VMVGRTTVVIAHRLSTIRNADTIAVVDSGRIVETGTHEQLMANPRSAYASLIQLQEAAQL 619
Query: 183 HRAGAAPSDSHSIS 224
+ SDS S+S
Sbjct: 620 QNKQSF-SDSASLS 632
Score = 72.8 bits (177), Expect = 3e-11
Identities = 35/56 (62%), Positives = 43/56 (76%)
Frame = +3
Query: 3 VMVGRTTVMIAHRLSTIRNADMIAVVQSGKIIETGTHEQLMSNPRSSYASLVQLQE 170
VM RTTVM+AHRLSTI+NAD+I+V+Q GKIIE G H QL+ N +Y LV LQ+
Sbjct: 1198 VMRNRTTVMVAHRLSTIKNADVISVLQDGKIIEQGAHHQLIENRNGAYHKLVSLQQ 1253
>ref|NP_001047803.1| Os02g0693700 [Oryza sativa Japonica Group]
gi|27368851|emb|CAD59583.1| MDR-like ABC transporter
[Oryza sativa Japonica Group]
gi|41052997|dbj|BAD07906.1| MDR-like ABC transporter
[Oryza sativa Japonica Group]
gi|41053280|dbj|BAD07706.1| MDR-like ABC transporter
[Oryza sativa Japonica Group]
gi|113537334|dbj|BAF09717.1| Os02g0693700 [Oryza sativa
Japonica Group] gi|222623481|gb|EEE57613.1| hypothetical
protein OsJ_08005 [Oryza sativa Japonica Group]
Length = 1264
Score = 104 bits (260), Expect = 7e-21
Identities = 55/74 (74%), Positives = 64/74 (86%)
Frame = +3
Query: 3 VMVGRTTVMIAHRLSTIRNADMIAVVQSGKIIETGTHEQLMSNPRSSYASLVQLQEAASV 182
VMVGRTTV+IAHRLSTIRNAD IAVV SG+I+ETGTHEQLM+NPRS+YASL+QLQEAA +
Sbjct: 560 VMVGRTTVVIAHRLSTIRNADTIAVVDSGRIVETGTHEQLMANPRSAYASLIQLQEAAQL 619
Query: 183 HRAGAAPSDSHSIS 224
+ SDS S+S
Sbjct: 620 QNKQSF-SDSASLS 632
Score = 72.8 bits (177), Expect = 3e-11
Identities = 35/56 (62%), Positives = 43/56 (76%)
Frame = +3
Query: 3 VMVGRTTVMIAHRLSTIRNADMIAVVQSGKIIETGTHEQLMSNPRSSYASLVQLQE 170
VM RTTVM+AHRLSTI+NAD+I+V+Q GKIIE G H QL+ N +Y LV LQ+
Sbjct: 1198 VMRNRTTVMVAHRLSTIKNADVISVLQDGKIIEQGAHHQLIENRNGAYHKLVSLQQ 1253