BLASTX nr result

ID: Dioscorea21_contig00035294 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00035294
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFC90224.1| nucleotide-binding site leucine-rich repeat prote...    73   3e-11
ref|XP_002280432.1| PREDICTED: disease resistance protein RPS5-l...    72   4e-11
emb|CAN68949.1| hypothetical protein VITISV_039606 [Vitis vinifera]    72   4e-11
gb|AFC90668.1| nucleotide-binding site leucine-rich repeat prote...    72   6e-11
emb|CAH66367.1| OSIGBa0130K07.3 [Oryza sativa Indica Group]            72   6e-11

>gb|AFC90224.1| nucleotide-binding site leucine-rich repeat protein, partial
           [Rhododendron formosanum]
          Length = 298

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 32/94 (34%), Positives = 56/94 (59%)
 Frame = +1

Query: 1   EWRHMLRSLIKMDVRTVIGIEESLFHNLKVSYDNLATDTLRQCFLCCAQWRKGALIPISD 180
           EWR+ L  LI+   +    +   +F  LK SY  L    L+ CFL C+ + +   IP+++
Sbjct: 184 EWRNALNELIR-STKDACDVVSKVFEQLKFSYSRLGDKVLQDCFLYCSLYPEDCFIPVNE 242

Query: 181 LIEQWIGCELISDFENIEEAFDEGYSLIAKLNEA 282
           LI+ WI  E+I+D +++E  FD+G++++ KL  +
Sbjct: 243 LIQYWIEEEIIADTDSVEAQFDKGHAILGKLTSS 276


>ref|XP_002280432.1| PREDICTED: disease resistance protein RPS5-like [Vitis vinifera]
          Length = 947

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 34/93 (36%), Positives = 58/93 (62%)
 Frame = +1

Query: 4   WRHMLRSLIKMDVRTVIGIEESLFHNLKVSYDNLATDTLRQCFLCCAQWRKGALIPISDL 183
           W  +++ L K     + G+E+ LF+ LKVSYD L+ + ++ CF+ C+ + +  +I I  L
Sbjct: 365 WDKVIQDLSKFPAE-ISGMEDELFNRLKVSYDRLSDNAIKSCFIHCSLFSEDVVIRIETL 423

Query: 184 IEQWIGCELISDFENIEEAFDEGYSLIAKLNEA 282
           IEQWIG  L+ +  +I EA ++G+ ++ KL  A
Sbjct: 424 IEQWIGEGLLGEVHDIYEARNQGHKIVKKLKHA 456


>emb|CAN68949.1| hypothetical protein VITISV_039606 [Vitis vinifera]
          Length = 947

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 34/93 (36%), Positives = 58/93 (62%)
 Frame = +1

Query: 4   WRHMLRSLIKMDVRTVIGIEESLFHNLKVSYDNLATDTLRQCFLCCAQWRKGALIPISDL 183
           W  +++ L K     + G+E+ LF+ LKVSYD L+ + ++ CF+ C+ + +  +I I  L
Sbjct: 365 WDKVIQDLSKFPAE-ISGMEDELFNRLKVSYDRLSDNAIKSCFIHCSLFSEDVVIRIETL 423

Query: 184 IEQWIGCELISDFENIEEAFDEGYSLIAKLNEA 282
           IEQWIG  L+ +  +I EA ++G+ ++ KL  A
Sbjct: 424 IEQWIGEGLLGEVHDIYEARNQGHKIVKKLKHA 456


>gb|AFC90668.1| nucleotide-binding site leucine-rich repeat protein, partial
           [Rhododendron formosanum]
          Length = 267

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 34/88 (38%), Positives = 50/88 (56%)
 Frame = +1

Query: 1   EWRHMLRSLIKMDVRTVIGIEESLFHNLKVSYDNLATDTLRQCFLCCAQWRKGALIPISD 180
           EWR+ L  LI    +     E  +F  LK SY  L    L+ CFL CA + +   IP+ +
Sbjct: 180 EWRNALNELIN-STKDASDDESEVFERLKFSYSRLGNKVLQDCFLYCASYPEDHKIPVDE 238

Query: 181 LIEQWIGCELISDFENIEEAFDEGYSLI 264
           LIE WI  ELI D +++E  FD+G++++
Sbjct: 239 LIEYWIAEELIGDMDSVEAQFDKGHAIL 266


>emb|CAH66367.1| OSIGBa0130K07.3 [Oryza sativa Indica Group]
          Length = 967

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 39/97 (40%), Positives = 60/97 (61%), Gaps = 4/97 (4%)
 Frame = +1

Query: 1   EWRHMLRSLIKMDVRTVIGIEES---LFHNLKVSYDN-LATDTLRQCFLCCAQWRKGALI 168
           +WR M   L    +  + G+E     L H+LK SYD+ L+T T R+CFLCCA W +G  I
Sbjct: 378 DWRRMAAFLESSQIHRIPGMERDNTVLLHDLKKSYDHGLSTPTDRECFLCCALWPRGRSI 437

Query: 169 PISDLIEQWIGCELISDFENIEEAFDEGYSLIAKLNE 279
             +DLI+ WIG  LI +  ++++A  +G+S+I+ + E
Sbjct: 438 NKADLIDCWIGLGLIRE-PSLDDAVQKGFSMISCMLE 473


Top