BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00035280
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319343.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
ref|XP_002520874.1| pentatricopeptide repeat-containing protein,...    96   3e-18
ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containi...    96   4e-18
emb|CBI25349.3| unnamed protein product [Vitis vinifera]               96   4e-18
ref|NP_181604.1| pentatricopeptide repeat-containing protein [Ar...    84   2e-14

>ref|XP_002319343.1| predicted protein [Populus trichocarpa] gi|222857719|gb|EEE95266.1|
           predicted protein [Populus trichocarpa]
          Length = 848

 Score =  106 bits (264), Expect = 2e-21
 Identities = 53/91 (58%), Positives = 65/91 (71%)
 Frame = +1

Query: 1   LGYQFHGLTIKNSTAADVFVGSGLIDMYAKFGMPKSSECVLSDMPYKNLVVYNSMISCYG 180
           LG   HGL IK+    DVFV S L+DMY+KF  PK S  V SDMP KNLV +NS+ISCY 
Sbjct: 476 LGCTIHGLAIKSGLEQDVFVASSLVDMYSKFNFPKMSGNVFSDMPLKNLVAWNSIISCYC 535

Query: 181 RNGMVDDSIKVLAKISQLGLTPDSISITSSL 273
           RNG+ D SI + ++++Q GL PDS+SITS L
Sbjct: 536 RNGLPDLSISLFSQMTQYGLFPDSVSITSVL 566


>ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540005|gb|EEF41583.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 833

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 47/92 (51%), Positives = 62/92 (67%)
 Frame = +1

Query: 1   LGYQFHGLTIKNSTAADVFVGSGLIDMYAKFGMPKSSECVLSDMPYKNLVVYNSMISCYG 180
           LG   HG  IK+    DVFV S L+DMY+KFG P+ +  + SDMP KNLV +NS+ISCY 
Sbjct: 461 LGCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLKNLVAWNSIISCYC 520

Query: 181 RNGMVDDSIKVLAKISQLGLTPDSISITSSLA 276
           RN + D SI + +++ +  L PDS+S TS LA
Sbjct: 521 RNNLPDLSINLFSQVLRNDLYPDSVSFTSVLA 552



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/91 (32%), Positives = 50/91 (54%)
 Frame = +1

Query: 4   GYQFHGLTIKNSTAADVFVGSGLIDMYAKFGMPKSSECVLSDMPYKNLVVYNSMISCYGR 183
           G   HG  ++     D+ V + LIDMY K G+ K ++ +   +  KNLV +NSMI  YG 
Sbjct: 563 GKSVHGYLVRLWIPFDLQVENTLIDMYIKCGLLKYAQHIFERISEKNLVAWNSMIGGYGS 622

Query: 184 NGMVDDSIKVLAKISQLGLTPDSISITSSLA 276
           +G    +I++  ++   G+ PD ++  S L+
Sbjct: 623 HGECSKAIELFDEMRSSGIKPDDVTFLSLLS 653


>ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
           [Vitis vinifera]
          Length = 836

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 48/91 (52%), Positives = 61/91 (67%)
 Frame = +1

Query: 1   LGYQFHGLTIKNSTAADVFVGSGLIDMYAKFGMPKSSECVLSDMPYKNLVVYNSMISCYG 180
           LG+  HG  IK    +DVFV   L+DMY+KFG  +S+E V S MP KNLV +NSMISCY 
Sbjct: 464 LGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYS 523

Query: 181 RNGMVDDSIKVLAKISQLGLTPDSISITSSL 273
            NG+ + SI +L +I Q G   DS+SIT+ L
Sbjct: 524 WNGLPEMSINLLPQILQHGFYLDSVSITTVL 554



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/85 (31%), Positives = 50/85 (58%)
 Frame = +1

Query: 4   GYQFHGLTIKNSTAADVFVGSGLIDMYAKFGMPKSSECVLSDMPYKNLVVYNSMISCYGR 183
           G   H   I+    +D+ V + LIDMY K G  K ++ +  +MP +NLV +NSMI+ YG 
Sbjct: 566 GKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGS 625

Query: 184 NGMVDDSIKVLAKISQLGLTPDSIS 258
           +G  ++++++  ++ +    PD ++
Sbjct: 626 HGNCEEAVRLFKEMKRSETAPDEVT 650


>emb|CBI25349.3| unnamed protein product [Vitis vinifera]
          Length = 1241

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 48/91 (52%), Positives = 61/91 (67%)
 Frame = +1

Query: 1    LGYQFHGLTIKNSTAADVFVGSGLIDMYAKFGMPKSSECVLSDMPYKNLVVYNSMISCYG 180
            LG+  HG  IK    +DVFV   L+DMY+KFG  +S+E V S MP KNLV +NSMISCY 
Sbjct: 869  LGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYS 928

Query: 181  RNGMVDDSIKVLAKISQLGLTPDSISITSSL 273
             NG+ + SI +L +I Q G   DS+SIT+ L
Sbjct: 929  WNGLPEMSINLLPQILQHGFYLDSVSITTVL 959



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/85 (31%), Positives = 50/85 (58%)
 Frame = +1

Query: 4    GYQFHGLTIKNSTAADVFVGSGLIDMYAKFGMPKSSECVLSDMPYKNLVVYNSMISCYGR 183
            G   H   I+    +D+ V + LIDMY K G  K ++ +  +MP +NLV +NSMI+ YG 
Sbjct: 971  GKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGS 1030

Query: 184  NGMVDDSIKVLAKISQLGLTPDSIS 258
            +G  ++++++  ++ +    PD ++
Sbjct: 1031 HGNCEEAVRLFKEMKRSETAPDEVT 1055


>ref|NP_181604.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75276036|sp|Q7XJN6.1|PP197_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g40720 gi|330254774|gb|AEC09868.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 860

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 42/90 (46%), Positives = 58/90 (64%)
 Frame = +1

Query: 4   GYQFHGLTIKNSTAADVFVGSGLIDMYAKFGMPKSSECVLSDMPYKNLVVYNSMISCYGR 183
           G Q HG  IK     +VFVGS LID+Y+K G+P+ +  V + M  +N+V +NSMISCY R
Sbjct: 495 GLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSR 554

Query: 184 NGMVDDSIKVLAKISQLGLTPDSISITSSL 273
           N + + SI +   +   G+ PDS+SITS L
Sbjct: 555 NNLPELSIDLFNLMLSQGIFPDSVSITSVL 584



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/91 (29%), Positives = 50/91 (54%)
 Frame = +1

Query: 4   GYQFHGLTIKNSTAADVFVGSGLIDMYAKFGMPKSSECVLSDMPYKNLVVYNSMISCYGR 183
           G   HG T++    +D  + + LIDMY K G  K +E +   M +K+L+ +N MI  YG 
Sbjct: 596 GKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGS 655

Query: 184 NGMVDDSIKVLAKISQLGLTPDSISITSSLA 276
           +G    ++ +  ++ + G +PD ++  S ++
Sbjct: 656 HGDCITALSLFDEMKKAGESPDDVTFLSLIS 686