BLASTX nr result

ID: Dioscorea21_contig00035264 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00035264
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001046342.1| Os02g0225900 [Oryza sativa Japonica Group] g...    82   3e-14
gb|EEE56589.1| hypothetical protein OsJ_05948 [Oryza sativa Japo...    82   3e-14
ref|XP_003571128.1| PREDICTED: probable F-box protein At4g22030-...    82   6e-14
ref|NP_001046341.1| Os02g0225500 [Oryza sativa Japonica Group] g...    80   2e-13
ref|XP_003571129.1| PREDICTED: probable F-box protein At4g22030-...    80   2e-13

>ref|NP_001046342.1| Os02g0225900 [Oryza sativa Japonica Group]
           gi|49388529|dbj|BAD25651.1| F-box-like [Oryza sativa
           Japonica Group] gi|113535873|dbj|BAF08256.1|
           Os02g0225900 [Oryza sativa Japonica Group]
          Length = 435

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 44/92 (47%), Positives = 61/92 (66%), Gaps = 2/92 (2%)
 Frame = -3

Query: 279 NSMQHGWQVGMLFELMRNCAGYYRRLVEEIEFSLEEK--KREDDEEMFKLKIALCLGRSV 106
           N+++HG Q+GM+FEL+RNCAG+YR++ EEIE +L E   +R +D E+F+ K+AL LGRS 
Sbjct: 349 NTVEHGGQLGMVFELLRNCAGFYRKMQEEIEANLGEADVERREDGEVFETKVALQLGRST 408

Query: 105 SEFKDFXXXXXXXXXXXCEDDGKIEVFAGKLF 10
           SE K F              D  ++ FAGKLF
Sbjct: 409 SELKQFRRMASPAV-----KDDDVKDFAGKLF 435


>gb|EEE56589.1| hypothetical protein OsJ_05948 [Oryza sativa Japonica Group]
          Length = 398

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 44/92 (47%), Positives = 61/92 (66%), Gaps = 2/92 (2%)
 Frame = -3

Query: 279 NSMQHGWQVGMLFELMRNCAGYYRRLVEEIEFSLEEK--KREDDEEMFKLKIALCLGRSV 106
           N+++HG Q+GM+FEL+RNCAG+YR++ EEIE +L E   +R +D E+F+ K+AL LGRS 
Sbjct: 312 NTVEHGGQLGMVFELLRNCAGFYRKMQEEIEANLGEADVERREDGEVFETKVALQLGRST 371

Query: 105 SEFKDFXXXXXXXXXXXCEDDGKIEVFAGKLF 10
           SE K F              D  ++ FAGKLF
Sbjct: 372 SELKQFRRMASPAV-----KDDDVKDFAGKLF 398


>ref|XP_003571128.1| PREDICTED: probable F-box protein At4g22030-like [Brachypodium
           distachyon]
          Length = 434

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 45/92 (48%), Positives = 60/92 (65%), Gaps = 2/92 (2%)
 Frame = -3

Query: 279 NSMQHGWQVGMLFELMRNCAGYYRRLVEEIEFSLEEK--KREDDEEMFKLKIALCLGRSV 106
           N+M+HG Q+GM+FEL+RNCAG+YR++ E+IE +L E   +R +  E+F  KIAL LGRSV
Sbjct: 348 NTMEHGGQLGMVFELLRNCAGFYRKIQEDIEAALAEPDVERRESGEVFATKIALKLGRSV 407

Query: 105 SEFKDFXXXXXXXXXXXCEDDGKIEVFAGKLF 10
           S+ K F              D  I+ FAGKLF
Sbjct: 408 SDLKQFGKMASASVR-----DEDIKYFAGKLF 434


>ref|NP_001046341.1| Os02g0225500 [Oryza sativa Japonica Group]
           gi|49388526|dbj|BAD25648.1| F-box-like [Oryza sativa
           Japonica Group] gi|113535872|dbj|BAF08255.1|
           Os02g0225500 [Oryza sativa Japonica Group]
          Length = 435

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 43/92 (46%), Positives = 60/92 (65%), Gaps = 2/92 (2%)
 Frame = -3

Query: 279 NSMQHGWQVGMLFELMRNCAGYYRRLVEEIEFSLEEK--KREDDEEMFKLKIALCLGRSV 106
           N+++HG Q+GM+FEL+RNCAG+YR++ EEIE +L E   +R +D E+ + K+AL LGRS 
Sbjct: 349 NTVEHGGQLGMVFELLRNCAGFYRKMQEEIEANLGEADVERREDGEVLETKVALQLGRST 408

Query: 105 SEFKDFXXXXXXXXXXXCEDDGKIEVFAGKLF 10
           SE K F              D  ++ FAGKLF
Sbjct: 409 SELKQFRRLASPSF-----KDDDVKDFAGKLF 435


>ref|XP_003571129.1| PREDICTED: probable F-box protein At4g22030-like [Brachypodium
           distachyon]
          Length = 416

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 46/92 (50%), Positives = 62/92 (67%), Gaps = 2/92 (2%)
 Frame = -3

Query: 279 NSMQHGWQVGMLFELMRNCAGYYRRLVEEIEFSLEEK--KREDDEEMFKLKIALCLGRSV 106
           N+M+HG Q+GM+FEL+RNCAG+YR++ E+IE +L E   +R +  E+F  KIAL LGRSV
Sbjct: 330 NTMEHGGQLGMVFELLRNCAGFYRKIQEDIEAALAEPDVERREGGEVFATKIALKLGRSV 389

Query: 105 SEFKDFXXXXXXXXXXXCEDDGKIEVFAGKLF 10
           S+ K F            E+D  I+ FAGKLF
Sbjct: 390 SDLKQF---GKMASPSVREED--IKDFAGKLF 416


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