BLASTX nr result

ID: Dioscorea21_contig00035258 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00035258
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBX25446.1| hypothetical_protein [Oryza glaberrima]                92   6e-17
gb|EEC67632.1| hypothetical protein OsI_35028 [Oryza sativa Indi...    92   6e-17
ref|NP_001065701.1| Os11g0138700 [Oryza sativa Japonica Group] g...    92   6e-17
ref|XP_002874330.1| kelch repeat-containing F-box family protein...    89   3e-16
emb|CBX25349.1| hypothetical_protein [Oryza brachyantha]               89   5e-16

>emb|CBX25446.1| hypothetical_protein [Oryza glaberrima]
          Length = 415

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 57/136 (41%), Positives = 74/136 (54%), Gaps = 4/136 (2%)
 Frame = -3

Query: 397 SFYSLRLSHGLLRPALHALSLPSPSELFPASLMILSSSWDL----PFGXXXXXXXXPDGS 230
           +F  LR +H  LRP+L ALS+ S +   P +L+   SS  +    P              
Sbjct: 88  AFLHLRRAHAHLRPSLLALSV-SDNGCVPQALLRFESSVPVLEVAPLPLPPTLLHCGGSV 146

Query: 229 LTHARAVTLGRSIYLIGRNATLRFDAWTGAVSSRSPTLIPRKKFXXXXXXXXXXXXXXXX 50
             HARAV LGR ++LIGR ATLR DA TGA  + +PTL PRKKF                
Sbjct: 147 FAHARAVVLGRDVFLIGRGATLRVDALTGAARACAPTLFPRKKFAAAAVGDRIYVAGGSA 206

Query: 49  RSSAVEEYDPDLDSWR 2
           R++AVEEYDP++D+WR
Sbjct: 207 RTAAVEEYDPEVDAWR 222


>gb|EEC67632.1| hypothetical protein OsI_35028 [Oryza sativa Indica Group]
          Length = 415

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 57/136 (41%), Positives = 74/136 (54%), Gaps = 4/136 (2%)
 Frame = -3

Query: 397 SFYSLRLSHGLLRPALHALSLPSPSELFPASLMILSSSWDL----PFGXXXXXXXXPDGS 230
           +F  LR +H  LRP+L ALS+ S +   P +L+   SS  +    P              
Sbjct: 88  AFLHLRRAHAHLRPSLLALSV-SDNGCVPQALLRFESSVPVLEVAPLPLPPTLLHCGGSV 146

Query: 229 LTHARAVTLGRSIYLIGRNATLRFDAWTGAVSSRSPTLIPRKKFXXXXXXXXXXXXXXXX 50
             HARAV LGR ++LIGR ATLR DA TGA  + +PTL PRKKF                
Sbjct: 147 FAHARAVVLGRDVFLIGRGATLRVDALTGAARACAPTLFPRKKFAAAAVGDRIYVAGGSA 206

Query: 49  RSSAVEEYDPDLDSWR 2
           R++AVEEYDP++D+WR
Sbjct: 207 RTAAVEEYDPEVDAWR 222


>ref|NP_001065701.1| Os11g0138700 [Oryza sativa Japonica Group]
           gi|108863975|gb|ABA91375.2| Kelch motif family protein,
           expressed [Oryza sativa Japonica Group]
           gi|113644405|dbj|BAF27546.1| Os11g0138700 [Oryza sativa
           Japonica Group]
          Length = 415

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 57/136 (41%), Positives = 74/136 (54%), Gaps = 4/136 (2%)
 Frame = -3

Query: 397 SFYSLRLSHGLLRPALHALSLPSPSELFPASLMILSSSWDL----PFGXXXXXXXXPDGS 230
           +F  LR +H  LRP+L ALS+ S +   P +L+   SS  +    P              
Sbjct: 88  AFLHLRRAHAHLRPSLLALSV-SDNGCVPQALLRFESSVPVLEVAPLPLPPTLLHCGGSV 146

Query: 229 LTHARAVTLGRSIYLIGRNATLRFDAWTGAVSSRSPTLIPRKKFXXXXXXXXXXXXXXXX 50
             HARAV LGR ++LIGR ATLR DA TGA  + +PTL PRKKF                
Sbjct: 147 FAHARAVVLGRDVFLIGRGATLRVDALTGAARACAPTLFPRKKFAAAAVGDRIYVAGGSA 206

Query: 49  RSSAVEEYDPDLDSWR 2
           R++AVEEYDP++D+WR
Sbjct: 207 RTAAVEEYDPEVDAWR 222


>ref|XP_002874330.1| kelch repeat-containing F-box family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297320167|gb|EFH50589.1| kelch
           repeat-containing F-box family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 410

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 56/138 (40%), Positives = 73/138 (52%), Gaps = 5/138 (3%)
 Frame = -3

Query: 400 PSFYSLRLSHGLLRPALHALSLPSPSELFPASLMILS--SSWDLPFGXXXXXXXXPDGSL 227
           P F  LR   GLLR +L A+S    S LF A L   S  +SW +            DGSL
Sbjct: 81  PYFLHLRRRLGLLRHSLFAISAVD-SGLFAADLQFQSEIASWKVSLAVSSRSVCV-DGSL 138

Query: 226 THARAVTLGRSIYLIGRNATLRFDAWTGAVSSRSPTLIPRKKFXXXXXXXXXXXXXXXXR 47
           +HARA  +G  +Y++ RNA LR+D+W G ++ RSP L PRKKF                 
Sbjct: 139 SHARAAAIGPRVYVVSRNAVLRYDSWMGTLNLRSPMLFPRKKFAIAVVSGKIYVAGGGGG 198

Query: 46  S---SAVEEYDPDLDSWR 2
           S   +AVEEYDP+L+ W+
Sbjct: 199 SEVAAAVEEYDPELNRWK 216


>emb|CBX25349.1| hypothetical_protein [Oryza brachyantha]
          Length = 638

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 56/135 (41%), Positives = 74/135 (54%), Gaps = 3/135 (2%)
 Frame = -3

Query: 397 SFYSLRLSHGLLRPALHALSLPSPSELFPASLMI--LSSSWDLPFGXXXXXXXXPDGSL- 227
           +F  LR +H  LRP+L ALS+   + +  A L     S + ++             GS+ 
Sbjct: 93  AFLHLRRAHAQLRPSLLALSVSDSACIAQALLQFDAFSPALEVAALPLPPTLLHCGGSVF 152

Query: 226 THARAVTLGRSIYLIGRNATLRFDAWTGAVSSRSPTLIPRKKFXXXXXXXXXXXXXXXXR 47
            HARAV LGR ++LIGR ATLR DA TGA  + +PTL PRKKF                R
Sbjct: 153 AHARAVVLGREVFLIGRGATLRVDALTGAARACAPTLFPRKKFAAAAVGDRIYVAGGSAR 212

Query: 46  SSAVEEYDPDLDSWR 2
           ++AVEEYDP+ D+WR
Sbjct: 213 TAAVEEYDPEADAWR 227


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