BLASTX nr result

ID: Dioscorea21_contig00035257 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00035257
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002455140.1| hypothetical protein SORBIDRAFT_03g004970 [S...   104   8e-21
gb|AFW80107.1| hypothetical protein ZEAMMB73_721333 [Zea mays]        100   2e-19
ref|NP_001131444.1| uncharacterized protein LOC100192776 [Zea ma...   100   2e-19
ref|NP_001042108.1| Os01g0165100 [Oryza sativa Japonica Group] g...    97   2e-18
ref|XP_002520802.1| conserved hypothetical protein [Ricinus comm...    95   7e-18

>ref|XP_002455140.1| hypothetical protein SORBIDRAFT_03g004970 [Sorghum bicolor]
           gi|241927115|gb|EES00260.1| hypothetical protein
           SORBIDRAFT_03g004970 [Sorghum bicolor]
          Length = 501

 Score =  104 bits (259), Expect = 8e-21
 Identities = 52/105 (49%), Positives = 70/105 (66%), Gaps = 1/105 (0%)
 Frame = -2

Query: 312 LKVSITKNLQCHSP-YVTFSILADIQISISLWTSNSLILKDKNQQSLDDDIIVQLFHNIV 136
           + +S+ K      P YVTFSI A+  + +SLWTS  + LK K QQ+LD+  ++Q+F +IV
Sbjct: 43  MNLSVVKTPSIPQPSYVTFSIFANYSVPVSLWTSKPVHLKTKTQQTLDEQDMIQVFVDIV 102

Query: 135 NGVLHYGPLKKSSFRFPAVQTGEKFRDMFNLAFKTLIFLVCIYEA 1
           N V+ Y P KK SFRFP  Q    F+D+FN+ F +L FLVCIYEA
Sbjct: 103 NSVMRYCPDKKLSFRFPGAQPHANFKDVFNIVFLSLAFLVCIYEA 147


>gb|AFW80107.1| hypothetical protein ZEAMMB73_721333 [Zea mays]
          Length = 253

 Score =  100 bits (248), Expect = 2e-19
 Identities = 50/104 (48%), Positives = 67/104 (64%), Gaps = 1/104 (0%)
 Frame = -2

Query: 312 LKVSITKNLQ-CHSPYVTFSILADIQISISLWTSNSLILKDKNQQSLDDDIIVQLFHNIV 136
           + +S+TK       PYV FS+ A+  + +SLW S  + LK K QQ+LD+  I+ +F NIV
Sbjct: 48  INLSVTKTTSIAQPPYVIFSVFANYSMPVSLWKSQPVHLKTKTQQTLDEQDIIHIFVNIV 107

Query: 135 NGVLHYGPLKKSSFRFPAVQTGEKFRDMFNLAFKTLIFLVCIYE 4
           N VL Y P K SSFRFP  Q    F D+FN+AF +L FL+CI+E
Sbjct: 108 NSVLKYCPDKNSSFRFPGAQPRGNFSDVFNIAFLSLAFLLCIFE 151


>ref|NP_001131444.1| uncharacterized protein LOC100192776 [Zea mays]
           gi|194691530|gb|ACF79849.1| unknown [Zea mays]
           gi|413947459|gb|AFW80108.1| hypothetical protein
           ZEAMMB73_721333 [Zea mays]
          Length = 506

 Score =  100 bits (248), Expect = 2e-19
 Identities = 50/104 (48%), Positives = 67/104 (64%), Gaps = 1/104 (0%)
 Frame = -2

Query: 312 LKVSITKNLQ-CHSPYVTFSILADIQISISLWTSNSLILKDKNQQSLDDDIIVQLFHNIV 136
           + +S+TK       PYV FS+ A+  + +SLW S  + LK K QQ+LD+  I+ +F NIV
Sbjct: 48  INLSVTKTTSIAQPPYVIFSVFANYSMPVSLWKSQPVHLKTKTQQTLDEQDIIHIFVNIV 107

Query: 135 NGVLHYGPLKKSSFRFPAVQTGEKFRDMFNLAFKTLIFLVCIYE 4
           N VL Y P K SSFRFP  Q    F D+FN+AF +L FL+CI+E
Sbjct: 108 NSVLKYCPDKNSSFRFPGAQPRGNFSDVFNIAFLSLAFLLCIFE 151


>ref|NP_001042108.1| Os01g0165100 [Oryza sativa Japonica Group]
           gi|55296853|dbj|BAD68290.1| unknown protein [Oryza
           sativa Japonica Group] gi|113531639|dbj|BAF04022.1|
           Os01g0165100 [Oryza sativa Japonica Group]
           gi|125524552|gb|EAY72666.1| hypothetical protein
           OsI_00532 [Oryza sativa Indica Group]
           gi|125569155|gb|EAZ10670.1| hypothetical protein
           OsJ_00500 [Oryza sativa Japonica Group]
           gi|215765266|dbj|BAG86963.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 502

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 49/104 (47%), Positives = 68/104 (65%)
 Frame = -2

Query: 312 LKVSITKNLQCHSPYVTFSILADIQISISLWTSNSLILKDKNQQSLDDDIIVQLFHNIVN 133
           + +S+ K       +VTFSI A+ ++ ISLWTS  + LK   QQSLD+  +++LF +IV+
Sbjct: 45  VNLSVVKTPPTQPSFVTFSIFANYRVPISLWTSKPVHLKSYTQQSLDEQEMLELFVDIVD 104

Query: 132 GVLHYGPLKKSSFRFPAVQTGEKFRDMFNLAFKTLIFLVCIYEA 1
            VL  GP KK SF+FP  Q     +D+FN+ F +L FLVCIYEA
Sbjct: 105 WVLRSGPNKKLSFQFPRAQIHGNLKDVFNIVFLSLAFLVCIYEA 148


>ref|XP_002520802.1| conserved hypothetical protein [Ricinus communis]
           gi|223539933|gb|EEF41511.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 497

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 51/105 (48%), Positives = 68/105 (64%), Gaps = 1/105 (0%)
 Frame = -2

Query: 312 LKVSITKNLQCHSPYVTFSILADIQISISLWTSNSLILKDKNQQSLDDDIIVQLFHNIVN 133
           L +S+TKNLQ  +P V+FSI+A+  +S SLWTS  +    K+ + LDD+ I     N++ 
Sbjct: 43  LNLSVTKNLQ--TPSVSFSIVANFSLSFSLWTSKPIKTNSKSFKLLDDETISSFLINLIE 100

Query: 132 GVLHYGPLK-KSSFRFPAVQTGEKFRDMFNLAFKTLIFLVCIYEA 1
            VL Y   K KSS R P +  G  F+DMFNLAF T+ FL+CIYEA
Sbjct: 101 DVLSYSSNKCKSSIRVPKLDFGSNFKDMFNLAFLTVSFLICIYEA 145


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