BLASTX nr result

ID: Dioscorea21_contig00035255 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00035255
         (554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE61043.1| hypothetical protein OsJ_14892 [Oryza sativa Japo...   170   2e-40
ref|NP_001052854.1| Os04g0436800 [Oryza sativa Japonica Group] g...   170   2e-40
gb|AFW58323.1| hypothetical protein ZEAMMB73_367038 [Zea mays]        169   4e-40
ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containi...   168   6e-40
ref|XP_002447868.1| hypothetical protein SORBIDRAFT_06g017180 [S...   166   2e-39

>gb|EEE61043.1| hypothetical protein OsJ_14892 [Oryza sativa Japonica Group]
          Length = 717

 Score =  170 bits (430), Expect = 2e-40
 Identities = 75/109 (68%), Positives = 93/109 (85%)
 Frame = +2

Query: 5   DNVTFIAILLACITEGYVDLGRRYFNLMSDEFDIIPRVEHYECMIELLGKHGFMVELEDF 184
           D+VTF+  L++CI+EG+V LGR YF  M+DE++I+PR+EHYECMIELLGKHG+MVELEDF
Sbjct: 588 DSVTFLGALVSCISEGHVGLGRSYFTQMTDEYNIVPRIEHYECMIELLGKHGYMVELEDF 647

Query: 185 IERMPFEPTTPMWMRIFDCCREHCYAKLGERAERGINESNPLNPVQFNV 331
           I  MPFEPTT MW+RIFDCCRE+   KLGERA + IN+SNPL PV+F +
Sbjct: 648 IGHMPFEPTTAMWLRIFDCCREYGNRKLGERAAQCINDSNPLTPVRFEI 696


>ref|NP_001052854.1| Os04g0436800 [Oryza sativa Japonica Group]
           gi|38344064|emb|CAD40816.2| OSJNBa0006B20.8 [Oryza
           sativa Japonica Group] gi|113564425|dbj|BAF14768.1|
           Os04g0436800 [Oryza sativa Japonica Group]
           gi|116310780|emb|CAH67572.1| H0315A08.2 [Oryza sativa
           Indica Group] gi|215704891|dbj|BAG94919.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|218194892|gb|EEC77319.1| hypothetical protein
           OsI_15984 [Oryza sativa Indica Group]
          Length = 717

 Score =  170 bits (430), Expect = 2e-40
 Identities = 75/109 (68%), Positives = 93/109 (85%)
 Frame = +2

Query: 5   DNVTFIAILLACITEGYVDLGRRYFNLMSDEFDIIPRVEHYECMIELLGKHGFMVELEDF 184
           D+VTF+  L++CI+EG+V LGR YF  M+DE++I+PR+EHYECMIELLGKHG+MVELEDF
Sbjct: 588 DSVTFLGALVSCISEGHVGLGRSYFTQMTDEYNIVPRIEHYECMIELLGKHGYMVELEDF 647

Query: 185 IERMPFEPTTPMWMRIFDCCREHCYAKLGERAERGINESNPLNPVQFNV 331
           I  MPFEPTT MW+RIFDCCRE+   KLGERA + IN+SNPL PV+F +
Sbjct: 648 IGHMPFEPTTAMWLRIFDCCREYGNRKLGERAAQCINDSNPLTPVRFEI 696


>gb|AFW58323.1| hypothetical protein ZEAMMB73_367038 [Zea mays]
          Length = 711

 Score =  169 bits (427), Expect = 4e-40
 Identities = 79/120 (65%), Positives = 95/120 (79%)
 Frame = +2

Query: 5   DNVTFIAILLACITEGYVDLGRRYFNLMSDEFDIIPRVEHYECMIELLGKHGFMVELEDF 184
           D+VTF+  L++CI EG+V LGR YF LM DE+ I+PR+EHYECMIELLGKHG+MVELEDF
Sbjct: 584 DSVTFLGALVSCICEGHVGLGRSYFTLMIDEYSIVPRIEHYECMIELLGKHGYMVELEDF 643

Query: 185 IERMPFEPTTPMWMRIFDCCREHCYAKLGERAERGINESNPLNPVQFNVCSGPAMEPS*C 364
           ++ MPFEPTT MW+RIFDCCRE+   KLG+RA + IN+S PL PV F V S P  E S C
Sbjct: 644 VDHMPFEPTTAMWLRIFDCCREYGNRKLGQRAAQRINDSKPLTPVIF-VESAPVYECSDC 702


>ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Brachypodium distachyon]
          Length = 1430

 Score =  168 bits (425), Expect = 6e-40
 Identities = 79/108 (73%), Positives = 91/108 (84%)
 Frame = +2

Query: 2   ADNVTFIAILLACITEGYVDLGRRYFNLMSDEFDIIPRVEHYECMIELLGKHGFMVELED 181
           AD+VTF+  L++CI+EG+V LGR YF LM DE  IIPR+EHYECMIELLGKHG MVELED
Sbjct: 585 ADSVTFLGALVSCISEGHVRLGRSYFTLMMDE-SIIPRIEHYECMIELLGKHGCMVELED 643

Query: 182 FIERMPFEPTTPMWMRIFDCCREHCYAKLGERAERGINESNPLNPVQF 325
           F+E MPFEPTT MW+RIFDCCRE+   KLGERA + IN+SNPL PVQF
Sbjct: 644 FVEHMPFEPTTAMWLRIFDCCREYGNRKLGERAAKCINDSNPLTPVQF 691



 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 43/103 (41%), Positives = 62/103 (60%)
 Frame = +2

Query: 5    DNVTFIAILLACITEGYVDLGRRYFNLMSDEFDIIPRVEHYECMIELLGKHGFMVELEDF 184
            D+VT I +L AC   G V+ GRRYF  M+++  IIP  +HY CMI+LLG+ G + E+E+ 
Sbjct: 1232 DSVTMIGVLSACGHSGLVEEGRRYFRSMTEDHGIIPSQDHYTCMIDLLGRAGHLKEVEEL 1291

Query: 185  IERMPFEPTTPMWMRIFDCCREHCYAKLGERAERGINESNPLN 313
            I+ M  EP   +W  +   CR H   ++GE A   + E +P N
Sbjct: 1292 IKEMSMEPDAVLWASLLGSCRLHKNVEMGEWAAGKLFELDPRN 1334


>ref|XP_002447868.1| hypothetical protein SORBIDRAFT_06g017180 [Sorghum bicolor]
           gi|241939051|gb|EES12196.1| hypothetical protein
           SORBIDRAFT_06g017180 [Sorghum bicolor]
          Length = 714

 Score =  166 bits (420), Expect = 2e-39
 Identities = 74/107 (69%), Positives = 89/107 (83%)
 Frame = +2

Query: 5   DNVTFIAILLACITEGYVDLGRRYFNLMSDEFDIIPRVEHYECMIELLGKHGFMVELEDF 184
           D+VTF+  L++CI EG+V LGR YF LM+DE+ IIPR+EHYECMIELLGKHG+MVELEDF
Sbjct: 587 DSVTFLGALVSCICEGHVGLGRSYFTLMTDEYSIIPRIEHYECMIELLGKHGYMVELEDF 646

Query: 185 IERMPFEPTTPMWMRIFDCCREHCYAKLGERAERGINESNPLNPVQF 325
           ++ MPFEPTT MW+RIFDCCRE+   KLGERA + IN+  PL PV F
Sbjct: 647 VDHMPFEPTTAMWLRIFDCCREYGNRKLGERAAQRINDRKPLTPVIF 693


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