BLASTX nr result

ID: Dioscorea21_contig00035220 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00035220
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298417.1| predicted protein [Populus trichocarpa] gi|2...    88   8e-16
ref|XP_003632938.1| PREDICTED: LRR receptor-like serine/threonin...    86   4e-15
ref|XP_002262904.2| PREDICTED: LRR receptor-like serine/threonin...    86   4e-15
ref|XP_002262961.2| PREDICTED: probable LRR receptor-like serine...    86   4e-15
emb|CBI25198.3| unnamed protein product [Vitis vinifera]               86   4e-15

>ref|XP_002298417.1| predicted protein [Populus trichocarpa] gi|222845675|gb|EEE83222.1|
            predicted protein [Populus trichocarpa]
          Length = 913

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 45/95 (47%), Positives = 54/95 (56%)
 Frame = -3

Query: 287  GGIPSGMTVMSSVGYLNLSNNNFSGKIPTSGQFSTFDASSFTGNNYLCGPPLALQCQETD 108
            G IPS +  +S + YLNLSNNN SG IP  GQ +TF+ASSF+GN  LCGPPL LQCQ  D
Sbjct: 797  GAIPSSLPALSFLSYLNLSNNNLSGMIPYRGQMTTFEASSFSGNPGLCGPPLVLQCQGDD 856

Query: 107  GDHTSQHXXXXXXXXXXXETIFEDKWLLLSLGIGY 3
                                 F D W  LS+G+G+
Sbjct: 857  SGKGGTSTIEDSDDG------FIDSWFYLSIGLGF 885


>ref|XP_003632938.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase
            GSO1-like [Vitis vinifera]
          Length = 1045

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 45/95 (47%), Positives = 57/95 (60%)
 Frame = -3

Query: 287  GGIPSGMTVMSSVGYLNLSNNNFSGKIPTSGQFSTFDASSFTGNNYLCGPPLALQCQETD 108
            G IPS M  +S +G LNLSNNNFSGKIP +GQ +TFD  +F GN  LCG PL  +CQ+ D
Sbjct: 904  GTIPSSMASLSFLGSLNLSNNNFSGKIPFTGQMTTFDELAFDGNPGLCGAPLVEKCQDED 963

Query: 107  GDHTSQHXXXXXXXXXXXETIFEDKWLLLSLGIGY 3
             D   +H              F D+W  LS+G+G+
Sbjct: 964  SD--KEHSTGTDENDNH----FIDRWFYLSVGLGF 992


>ref|XP_002262904.2| PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1
            [Vitis vinifera]
          Length = 1028

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 43/95 (45%), Positives = 57/95 (60%)
 Frame = -3

Query: 287  GGIPSGMTVMSSVGYLNLSNNNFSGKIPTSGQFSTFDASSFTGNNYLCGPPLALQCQETD 108
            G IPS M+ ++ +GYLNLSNNNFSGKIP +GQ +TF   +FTGN  LCG PL  +CQ+ D
Sbjct: 892  GTIPSSMSSLTFLGYLNLSNNNFSGKIPFAGQMTTFTELAFTGNPNLCGTPLVTKCQDED 951

Query: 107  GDHTSQHXXXXXXXXXXXETIFEDKWLLLSLGIGY 3
             D                   + D+W  LS+G+G+
Sbjct: 952  LDKRQSVLEDKIDGG------YIDQWFYLSIGLGF 980


>ref|XP_002262961.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At1g34110-like [Vitis vinifera]
          Length = 957

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 43/95 (45%), Positives = 57/95 (60%)
 Frame = -3

Query: 287  GGIPSGMTVMSSVGYLNLSNNNFSGKIPTSGQFSTFDASSFTGNNYLCGPPLALQCQETD 108
            G IPS M+ ++ +GYLNLSNNNFSGKIP +GQ +TF   +FTGN  LCG PL  +CQ+ D
Sbjct: 821  GTIPSSMSSLTFLGYLNLSNNNFSGKIPFAGQMTTFTELAFTGNPNLCGTPLVTKCQDED 880

Query: 107  GDHTSQHXXXXXXXXXXXETIFEDKWLLLSLGIGY 3
             D                   + D+W  LS+G+G+
Sbjct: 881  LDKRQSVLEDKIDGG------YIDQWFYLSIGLGF 909


>emb|CBI25198.3| unnamed protein product [Vitis vinifera]
          Length = 791

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 43/95 (45%), Positives = 57/95 (60%)
 Frame = -3

Query: 287 GGIPSGMTVMSSVGYLNLSNNNFSGKIPTSGQFSTFDASSFTGNNYLCGPPLALQCQETD 108
           G IPS M+ ++ +GYLNLSNNNFSGKIP +GQ +TF   +FTGN  LCG PL  +CQ+ D
Sbjct: 655 GTIPSSMSSLTFLGYLNLSNNNFSGKIPFAGQMTTFTELAFTGNPNLCGTPLVTKCQDED 714

Query: 107 GDHTSQHXXXXXXXXXXXETIFEDKWLLLSLGIGY 3
            D                   + D+W  LS+G+G+
Sbjct: 715 LDKRQSVLEDKIDGG------YIDQWFYLSIGLGF 743


Top