BLASTX nr result

ID: Dioscorea21_contig00035210 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00035210
         (500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517978.1| PREDICTED: dihydrolipoyllysine-residue acety...    58   7e-11
ref|XP_002282287.1| PREDICTED: dihydrolipoyllysine-residue acety...    58   2e-09
ref|XP_003555893.1| PREDICTED: dihydrolipoyllysine-residue acety...    58   3e-09
ref|XP_002315946.1| predicted protein [Populus trichocarpa] gi|2...    53   3e-08
ref|XP_002445536.1| hypothetical protein SORBIDRAFT_07g021070 [S...    49   1e-06

>ref|XP_003517978.1| PREDICTED: dihydrolipoyllysine-residue acetyltransferase component
           of pyruvate dehydrogenase complex-like [Glycine max]
          Length = 461

 Score = 57.8 bits (138), Expect(2) = 7e-11
 Identities = 44/130 (33%), Positives = 60/130 (46%), Gaps = 14/130 (10%)
 Frame = +3

Query: 114 GESLVVV---KSDVDIESFYGNILPSIVRAIR-----------LSYRSAR*VRGRRPNLQ 251
           G+S+VVV   K+D+D+E+FY  IL  IV A             L+   A           
Sbjct: 79  GDSVVVVESDKADMDVETFYNGILAVIVVAEGQTAPVGAPIGLLAETEAEVAEAMAAANS 138

Query: 252 GSCYCPXXXXXXXXXXXXLAMVTSPSKTVAIPNAKKLTNQYKLDTGAIVVK*PFGGITPS 431
                P              +  SP K VA P AKKL  Q+K++ G++V   PFG +TP+
Sbjct: 139 APTPPPKASDTSPAPAPAPEVSDSPRKAVATPYAKKLAKQHKVNIGSVVGTGPFGRVTPA 198

Query: 432 DVEVASSIQP 461
           DVE A+ I P
Sbjct: 199 DVEKAAGILP 208



 Score = 33.9 bits (76), Expect(2) = 7e-11
 Identities = 18/34 (52%), Positives = 22/34 (64%)
 Frame = +2

Query: 2   PASSCAARNGLVRRPKI*EIFMPALSSMMMQAKI 103
           P+ S   R+ L  + KI EIFMPALSS M + KI
Sbjct: 32  PSHSPRRRSSLTVKSKIREIFMPALSSTMTEGKI 65


>ref|XP_002282287.1| PREDICTED: dihydrolipoyllysine-residue acetyltransferase component
           of pyruvate dehydrogenase complex, mitochondrial-like
           [Vitis vinifera]
          Length = 488

 Score = 58.2 bits (139), Expect(2) = 2e-09
 Identities = 48/144 (33%), Positives = 63/144 (43%), Gaps = 28/144 (19%)
 Frame = +3

Query: 114 GESLVVV---KSDVDIESFYGNILPSIV------------------------RAIRLSYR 212
           GES+VVV   K+D+D+E+FY  IL +IV                         A   + +
Sbjct: 84  GESVVVVESDKADMDVETFYDGILAAIVVGDGEVAPVGAPIGLLAETEEEIAEAKAKASK 143

Query: 213 SAR*VRGRRPNLQGSCYCPXXXXXXXXXXXXLAMVTS-PSKTVAIPNAKKLTNQYKLDTG 389
           S        P    +   P             A V   P K VA P AKKL  Q+K+D G
Sbjct: 144 SGSSAPPPPPAPAAASASPAAPAVAPPKSAASAAVPDGPKKIVATPFAKKLAKQHKVDIG 203

Query: 390 AIVVK*PFGGITPSDVEVASSIQP 461
           ++V   PFG ITP+DVE A+ I P
Sbjct: 204 SVVGTGPFGRITPADVEAAAGISP 227



 Score = 28.5 bits (62), Expect(2) = 2e-09
 Identities = 14/19 (73%), Positives = 15/19 (78%)
 Frame = +2

Query: 47  KI*EIFMPALSSMMMQAKI 103
           KI EIFMPALSS M + KI
Sbjct: 52  KIREIFMPALSSTMTEGKI 70


>ref|XP_003555893.1| PREDICTED: dihydrolipoyllysine-residue acetyltransferase component
           of pyruvate dehydrogenase complex-like [Glycine max]
          Length = 472

 Score = 57.8 bits (138), Expect(2) = 3e-09
 Identities = 45/140 (32%), Positives = 63/140 (45%), Gaps = 24/140 (17%)
 Frame = +3

Query: 114 GESLVVV---KSDVDIESFYGNILPSIVRA---------------------IRLSYRSAR 221
           G+S+VVV   K+D+D+E+FY  IL +IV A                          ++A+
Sbjct: 78  GDSVVVVESDKADMDVETFYDGILAAIVVADGETAPVGAPIGLLADSPEEVAEAKAKAAK 137

Query: 222 *VRGRRPNLQGSCYCPXXXXXXXXXXXXLAMVTSPSKTVAIPNAKKLTNQYKLDTGAIVV 401
            V    P    S   P             ++   P+K VA P AKKL  Q+K+D   +  
Sbjct: 138 SVPSGSP-APASPSDPSPATPPPPPPPAKSVSEGPAKIVATPQAKKLAKQHKVDIATVAG 196

Query: 402 K*PFGGITPSDVEVASSIQP 461
             PFG ITP+DVE A+ I P
Sbjct: 197 TGPFGRITPADVEAAAGIAP 216



 Score = 28.5 bits (62), Expect(2) = 3e-09
 Identities = 14/19 (73%), Positives = 15/19 (78%)
 Frame = +2

Query: 47  KI*EIFMPALSSMMMQAKI 103
           KI EIFMPALSS M + KI
Sbjct: 46  KIREIFMPALSSTMTEGKI 64


>ref|XP_002315946.1| predicted protein [Populus trichocarpa] gi|222864986|gb|EEF02117.1|
           predicted protein [Populus trichocarpa]
          Length = 435

 Score = 52.8 bits (125), Expect(2) = 3e-08
 Identities = 42/140 (30%), Positives = 60/140 (42%), Gaps = 26/140 (18%)
 Frame = +3

Query: 114 GESLVVV---KSDVDIESFYGNILPSIV-------------RAIRLSYRSAR*VRGRRPN 245
           GES+VVV   K+D+D+E+FY  IL +IV               +  +       + +  +
Sbjct: 41  GESVVVVESDKADMDVETFYDGILAAIVVPEGETAPVGAPIGLLAETEEEIAEAKAKAAS 100

Query: 246 LQGSCYCPXXXXXXXXXXXXLAMVTSPS----------KTVAIPNAKKLTNQYKLDTGAI 395
             G    P               +  P           KTVA P AKKL  Q+K+D   +
Sbjct: 101 KAGGSSSPATPISPPDSSTPAPAIPQPPPAPAAPEGPRKTVATPFAKKLARQHKVDINKV 160

Query: 396 VVK*PFGGITPSDVEVASSI 455
           V   P+G ITP+DVE A+ I
Sbjct: 161 VGTGPYGRITPADVEAAAGI 180



 Score = 30.0 bits (66), Expect(2) = 3e-08
 Identities = 16/26 (61%), Positives = 18/26 (69%)
 Frame = +2

Query: 26  NGLVRRPKI*EIFMPALSSMMMQAKI 103
           N L  + KI EIFMPALSS M + KI
Sbjct: 2   NALRVQAKIREIFMPALSSTMTEGKI 27


>ref|XP_002445536.1| hypothetical protein SORBIDRAFT_07g021070 [Sorghum bicolor]
           gi|241941886|gb|EES15031.1| hypothetical protein
           SORBIDRAFT_07g021070 [Sorghum bicolor]
          Length = 475

 Score = 48.9 bits (115), Expect(2) = 1e-06
 Identities = 22/51 (43%), Positives = 34/51 (66%)
 Frame = +3

Query: 309 AMVTSPSKTVAIPNAKKLTNQYKLDTGAIVVK*PFGGITPSDVEVASSIQP 461
           A V + +K +A P+AKKL  Q+++D   +    P+G ITP+D+E A+ IQP
Sbjct: 170 APVAAGTKGIASPHAKKLAKQHRVDLAKVTGTGPYGRITPADIEAAAGIQP 220



 Score = 28.1 bits (61), Expect(2) = 1e-06
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = +1

Query: 190 APFDSPIDLLAESEDDAPISKA 255
           AP  +PI LLAESE++ P++ A
Sbjct: 110 APVGAPIALLAESEEEVPLAVA 131


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