BLASTX nr result
ID: Dioscorea21_contig00035203
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00035203
(518 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tpg|DAA47998.1| TPA: hypothetical protein ZEAMMB73_181337 [Zea m... 277 7e-73
ref|XP_002444760.1| hypothetical protein SORBIDRAFT_07g027560 [S... 277 7e-73
ref|XP_003572374.1| PREDICTED: pentatricopeptide repeat-containi... 276 1e-72
ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containi... 275 4e-72
ref|XP_002328140.1| predicted protein [Populus trichocarpa] gi|2... 270 1e-70
>tpg|DAA47998.1| TPA: hypothetical protein ZEAMMB73_181337 [Zea mays]
Length = 639
Score = 277 bits (708), Expect = 7e-73
Identities = 132/172 (76%), Positives = 151/172 (87%)
Frame = +3
Query: 3 DEMATRDLVVWNSIIGGFAQSGDGYKALELFIGMKRAGFLANQSTLTSGLRACTGTVMLE 182
DEM TRDLVVWNSII GFAQSGDG A+ELF+ MK AGF +NQ TLTS LRACTG VMLE
Sbjct: 227 DEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVMLE 286
Query: 183 MGRQVHVHVLKYDQDLILNNALLDMYCKCGSLAEANAVFQRMKERDVISWSTMISGLAQN 362
GRQVH HVLKYD+DLIL+NALLDMYCKCGSL +A+A+F RM +RDVISWSTM+SGLAQN
Sbjct: 287 AGRQVHAHVLKYDRDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWSTMVSGLAQN 346
Query: 363 GRSIEALRLFDSMKATGTKPNYITMVGVLFACSHAGLVEDGWYYFNSMAKVF 518
G+S+EALR+FD MK+ G PN++TMVGVLFACSHAGLVEDGW+YF SM ++F
Sbjct: 347 GKSVEALRVFDLMKSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFRSMKRLF 398
Score = 97.8 bits (242), Expect = 8e-19
Identities = 60/165 (36%), Positives = 87/165 (52%), Gaps = 4/165 (2%)
Frame = +3
Query: 3 DEMATRDLVVWNSIIGGFAQSGDGYK--ALELFIGMKRAGFLANQSTLTSGLRACTGTVM 176
D M R++V W +++ A S DG K AL + M+R G N T +S L ACT M
Sbjct: 128 DGMPVRNVVTWTTVVAALA-SADGRKQEALRFLVAMRRDGVAPNAYTFSSVLGACTTPGM 186
Query: 177 LEMGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLAEANAVFQRMKERDVISWSTMISG 350
L VH +K D D+ + ++L+D Y K G L VF M RD++ W+++I+G
Sbjct: 187 LTA---VHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEMVTRDLVVWNSIIAG 243
Query: 351 LAQNGRSIEALRLFDSMKATGTKPNYITMVGVLFACSHAGLVEDG 485
AQ+G + A+ LF MK G N T+ VL AC+ ++E G
Sbjct: 244 FAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAG 288
Score = 75.1 bits (183), Expect = 5e-12
Identities = 49/140 (35%), Positives = 75/140 (53%), Gaps = 8/140 (5%)
Frame = +3
Query: 81 ALELFIGMKRAGFLANQSTLTSGLRACTGTVMLEMGRQVHVHV-----LKYDQ--DLILN 239
AL L + AG A+ +LT ++ C + GR +H HV L +D L ++
Sbjct: 48 ALALLSELAAAGLRADPVSLTRLVKLCVRHGTADHGRLIHRHVEAHGPLPHDGAGGLFVS 107
Query: 240 NALLDMYCKCGSLAEANAVFQRMKERDVISWSTMISGLAQ-NGRSIEALRLFDSMKATGT 416
N+L MY K G L +A +F M R+V++W+T+++ LA +GR EALR +M+ G
Sbjct: 108 NSLASMYAKFGLLDDALRMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMRRDGV 167
Query: 417 KPNYITMVGVLFACSHAGLV 476
PN T VL AC+ G++
Sbjct: 168 APNAYTFSSVLGACTTPGML 187
>ref|XP_002444760.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
gi|241941110|gb|EES14255.1| hypothetical protein
SORBIDRAFT_07g027560 [Sorghum bicolor]
Length = 650
Score = 277 bits (708), Expect = 7e-73
Identities = 136/172 (79%), Positives = 148/172 (86%)
Frame = +3
Query: 3 DEMATRDLVVWNSIIGGFAQSGDGYKALELFIGMKRAGFLANQSTLTSGLRACTGTVMLE 182
DEM TRDLVVWNSII GFAQSGDG A+ELF+ MK AGF ANQ TLTS LRACTG VMLE
Sbjct: 238 DEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTGMVMLE 297
Query: 183 MGRQVHVHVLKYDQDLILNNALLDMYCKCGSLAEANAVFQRMKERDVISWSTMISGLAQN 362
GRQVH HVLKY++DLIL+NALLDMYCKCGSL +A A+F RM +RDVISWSTMISGLAQN
Sbjct: 298 AGRQVHAHVLKYERDLILHNALLDMYCKCGSLEDAEALFHRMPQRDVISWSTMISGLAQN 357
Query: 363 GRSIEALRLFDSMKATGTKPNYITMVGVLFACSHAGLVEDGWYYFNSMAKVF 518
G+S EALR+FD MK+ G PN ITMVGVLFACSHAGLVEDGWYYF SM K+F
Sbjct: 358 GKSAEALRVFDLMKSEGVAPNRITMVGVLFACSHAGLVEDGWYYFRSMKKLF 409
Score = 89.7 bits (221), Expect = 2e-16
Identities = 56/165 (33%), Positives = 85/165 (51%), Gaps = 4/165 (2%)
Frame = +3
Query: 3 DEMATRDLVVWNSIIGGFAQSGDGYK--ALELFIGMKRAGFLANQSTLTSGLRACTGTVM 176
D M R++V W +++ A + DG K AL + M R G N T +S L AC +
Sbjct: 139 DRMPERNVVTWTTVVAALANA-DGRKEEALRFLVAMWRDGVAPNAYTFSSVLGACGTPGV 197
Query: 177 LEMGRQVHVHVLKY--DQDLILNNALLDMYCKCGSLAEANAVFQRMKERDVISWSTMISG 350
L +H +K D D+ + ++L+D Y K G L VF M RD++ W+++I+G
Sbjct: 198 LAA---LHASTVKVGLDSDVFVRSSLIDAYMKLGDLDGGRRVFDEMVTRDLVVWNSIIAG 254
Query: 351 LAQNGRSIEALRLFDSMKATGTKPNYITMVGVLFACSHAGLVEDG 485
AQ+G + A+ LF MK G N T+ VL AC+ ++E G
Sbjct: 255 FAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTGMVMLEAG 299
Score = 76.3 bits (186), Expect = 2e-12
Identities = 49/143 (34%), Positives = 74/143 (51%), Gaps = 11/143 (7%)
Frame = +3
Query: 81 ALELFIGMKRAGFLANQSTLTSGLRACTGTVMLEMGRQVHVHVLKYDQ----------DL 230
AL L + AG A+ +LT ++ C GR +H HV + Q +
Sbjct: 56 ALALLPDLAAAGLRADPVSLTRLVKLCVRHGTAGDGRLIHRHVEAHGQLSHYSGGAGGGI 115
Query: 231 ILNNALLDMYCKCGSLAEANAVFQRMKERDVISWSTMISGLAQ-NGRSIEALRLFDSMKA 407
++N+L+ MY K G L +A +F RM ER+V++W+T+++ LA +GR EALR +M
Sbjct: 116 FVSNSLVSMYAKFGLLDDALRLFDRMPERNVVTWTTVVAALANADGRKEEALRFLVAMWR 175
Query: 408 TGTKPNYITMVGVLFACSHAGLV 476
G PN T VL AC G++
Sbjct: 176 DGVAPNAYTFSSVLGACGTPGVL 198
>ref|XP_003572374.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Brachypodium distachyon]
Length = 642
Score = 276 bits (707), Expect = 1e-72
Identities = 135/172 (78%), Positives = 150/172 (87%)
Frame = +3
Query: 3 DEMATRDLVVWNSIIGGFAQSGDGYKALELFIGMKRAGFLANQSTLTSGLRACTGTVMLE 182
DEM T DLVVWNSII GFAQSGDG A+ELF+ MK +GFLANQ TLTS LRACTG VMLE
Sbjct: 230 DEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVLRACTGMVMLE 289
Query: 183 MGRQVHVHVLKYDQDLILNNALLDMYCKCGSLAEANAVFQRMKERDVISWSTMISGLAQN 362
+GRQVH HVLKYD+DLIL+NALLDMYCKCG L +A+A+F RM +RDVISWSTMISGLAQN
Sbjct: 290 VGRQVHAHVLKYDRDLILHNALLDMYCKCGCLLDADALFSRMHDRDVISWSTMISGLAQN 349
Query: 363 GRSIEALRLFDSMKATGTKPNYITMVGVLFACSHAGLVEDGWYYFNSMAKVF 518
GRS+EAL++FD MKA G PN ITMVGVLFACSHAGLVEDGW+YF SM K+F
Sbjct: 350 GRSVEALKVFDLMKAEGPTPNNITMVGVLFACSHAGLVEDGWHYFRSMDKLF 401
Score = 89.4 bits (220), Expect = 3e-16
Identities = 55/163 (33%), Positives = 87/163 (53%), Gaps = 4/163 (2%)
Frame = +3
Query: 9 MATRDLVVWNSIIGGFAQS-GDGYKALELFIGMKRAGFLANQSTLTSGLRAC-TGTVMLE 182
M R++V W +++ A + G +AL + M+R G AN T +S L AC T V+
Sbjct: 133 MPQRNVVSWTTVVAALANAPGRKKEALRFLVEMRRDGVAANSYTFSSVLGACGTPGVLAA 192
Query: 183 MGRQVHVHVLKY--DQDLILNNALLDMYCKCGSLAEANAVFQRMKERDVISWSTMISGLA 356
M H ++K D D+ + ++L+D Y K G L VF M D++ W+++I+G A
Sbjct: 193 M----HADIIKVGLDSDVFVRSSLIDAYMKLGDLDSGRGVFDEMVTCDLVVWNSIIAGFA 248
Query: 357 QNGRSIEALRLFDSMKATGTKPNYITMVGVLFACSHAGLVEDG 485
Q+G + A+ LF MK +G N T+ VL AC+ ++E G
Sbjct: 249 QSGDGVGAMELFMRMKESGFLANQGTLTSVLRACTGMVMLEVG 291
Score = 68.2 bits (165), Expect = 7e-10
Identities = 49/155 (31%), Positives = 72/155 (46%), Gaps = 9/155 (5%)
Frame = +3
Query: 39 SIIGGFAQSGDGYKALELFIGMKRAGFLANQSTLTSGLRACTGTVMLEMGRQVHVHVLKY 218
SI G AL L + AG A+ +L ++ C + GR +H HV
Sbjct: 36 SIFSRLCLDGPFTAALALLPDIAAAGVRADPVSLCRLIKLCVRHGTVGDGRAIHRHVSLC 95
Query: 219 DQ--------DLILNNALLDMYCKCGSLAEANAVFQRMKERDVISWSTMISGLAQ-NGRS 371
L ++N+L+ MY K G L +A +F M +R+V+SW+T+++ LA GR
Sbjct: 96 AHGGGGATHGSLFVSNSLVSMYAKFGMLDDALELFGGMPQRNVVSWTTVVAALANAPGRK 155
Query: 372 IEALRLFDSMKATGTKPNYITMVGVLFACSHAGLV 476
EALR M+ G N T VL AC G++
Sbjct: 156 KEALRFLVEMRRDGVAANSYTFSSVLGACGTPGVL 190
>ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 275 bits (702), Expect = 4e-72
Identities = 131/172 (76%), Positives = 152/172 (88%)
Frame = +3
Query: 3 DEMATRDLVVWNSIIGGFAQSGDGYKALELFIGMKRAGFLANQSTLTSGLRACTGTVMLE 182
DEM TRDLVVWNSIIGGFAQ+ DG +AL LF MKRAGFLA+Q+TLTS LRACTG +LE
Sbjct: 211 DEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLE 270
Query: 183 MGRQVHVHVLKYDQDLILNNALLDMYCKCGSLAEANAVFQRMKERDVISWSTMISGLAQN 362
+GRQVHVHVLK+DQDLILNNAL+DMYCKCGSL +AN+ F RM E+DVISWSTM++GLAQN
Sbjct: 271 LGRQVHVHVLKFDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQN 330
Query: 363 GRSIEALRLFDSMKATGTKPNYITMVGVLFACSHAGLVEDGWYYFNSMAKVF 518
G S +AL LF+SMK +G++PNYIT++GVLFACSHAGLVE GWYYF SM K+F
Sbjct: 331 GYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLF 382
Score = 100 bits (248), Expect = 2e-19
Identities = 62/163 (38%), Positives = 89/163 (54%), Gaps = 2/163 (1%)
Frame = +3
Query: 3 DEMATRDLVVWNSIIGGFAQSGDGYKALELFIGMKRAGFLANQSTLTSGLRACTGTVMLE 182
DEM R++V W ++I ++ + KAL+ I M R G N T +S LRAC G L
Sbjct: 114 DEMPERNVVSWTTMISAYSNKLND-KALKCLILMFREGVRPNMFTYSSVLRACDGLPNL- 171
Query: 183 MGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLAEANAVFQRMKERDVISWSTMISGLA 356
RQ+H ++K + D+ + +AL+D+Y K L A VF M RD++ W+++I G A
Sbjct: 172 --RQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFA 229
Query: 357 QNGRSIEALRLFDSMKATGTKPNYITMVGVLFACSHAGLVEDG 485
QN EAL LF MK G + T+ VL AC+ L+E G
Sbjct: 230 QNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELG 272
Score = 81.6 bits (200), Expect = 6e-14
Identities = 49/154 (31%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Frame = +3
Query: 54 FAQSGDGYKALELFIGMKRAGFLANQSTLTSGLRACTGTVMLEMGRQVHVHVL--KYDQD 227
F D ++A+ M+R G A+ T + ++ C+ ++ G++VH H+ Y+
Sbjct: 30 FCHQWDLHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPK 89
Query: 228 LILNNALLDMYCKCGSLAEANAVFQRMKERDVISWSTMISGLAQNGRSIEALRLFDSMKA 407
+ + N LL+MY K L EA +F M ER+V+SW+TMIS + N + +AL+ M
Sbjct: 90 MFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYS-NKLNDKALKCLILMFR 148
Query: 408 TGTKPNYITMVGVLFACS--------HAGLVEDG 485
G +PN T VL AC H G+++ G
Sbjct: 149 EGVRPNMFTYSSVLRACDGLPNLRQLHCGIIKTG 182
>ref|XP_002328140.1| predicted protein [Populus trichocarpa] gi|222837655|gb|EEE76020.1|
predicted protein [Populus trichocarpa]
Length = 534
Score = 270 bits (689), Expect = 1e-70
Identities = 133/172 (77%), Positives = 150/172 (87%)
Frame = +3
Query: 3 DEMATRDLVVWNSIIGGFAQSGDGYKALELFIGMKRAGFLANQSTLTSGLRACTGTVMLE 182
DEM T DLVVW+SII GFAQ+ DG +AL LF MKRAGFLA Q+TLTS LRACTG +LE
Sbjct: 122 DEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLE 181
Query: 183 MGRQVHVHVLKYDQDLILNNALLDMYCKCGSLAEANAVFQRMKERDVISWSTMISGLAQN 362
+GRQVHVHVLKYDQDLILNNALLDMYCKCGSL +ANAVF RM E+DVISWSTMI+GLAQN
Sbjct: 182 LGRQVHVHVLKYDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQN 241
Query: 363 GRSIEALRLFDSMKATGTKPNYITMVGVLFACSHAGLVEDGWYYFNSMAKVF 518
G S EAL+LF+SMK G KPNY+T+VGVLFACSHAGLVE+G YYF+SM ++F
Sbjct: 242 GYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELF 293
Score = 105 bits (263), Expect = 3e-21
Identities = 63/163 (38%), Positives = 90/163 (55%), Gaps = 2/163 (1%)
Frame = +3
Query: 3 DEMATRDLVVWNSIIGGFAQSGDGYKALELFIGMKRAGFLANQSTLTSGLRACTGTVMLE 182
D+M R++V W ++I ++ + KALE + M R G N T +S LRAC G L
Sbjct: 24 DKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVRPNMFTYSSVLRACDGLFNL- 82
Query: 183 MGRQVHVHVLKY--DQDLILNNALLDMYCKCGSLAEANAVFQRMKERDVISWSTMISGLA 356
RQ+H ++K D D+ + +AL+D+Y + G L A VF M D++ WS++I+G A
Sbjct: 83 --RQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFDEMVTGDLVVWSSIIAGFA 140
Query: 357 QNGRSIEALRLFDSMKATGTKPNYITMVGVLFACSHAGLVEDG 485
QN EALRLF MK G T+ VL AC+ L+E G
Sbjct: 141 QNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLELG 183
Score = 57.8 bits (138), Expect = 9e-07
Identities = 31/75 (41%), Positives = 43/75 (57%)
Frame = +3
Query: 234 LNNALLDMYCKCGSLAEANAVFQRMKERDVISWSTMISGLAQNGRSIEALRLFDSMKATG 413
L N L++MY K G L +A VF +M +R+V+SW+TMIS + + +AL M G
Sbjct: 2 LINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREG 61
Query: 414 TKPNYITMVGVLFAC 458
+PN T VL AC
Sbjct: 62 VRPNMFTYSSVLRAC 76