BLASTX nr result

ID: Dioscorea21_contig00035202 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00035202
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298356.1| glycoside hydrolase [Populus trichocarpa] gi...   105   3e-21
ref|XP_002312097.1| predicted protein [Populus trichocarpa] gi|2...   100   9e-20
gb|ABK95730.1| unknown [Populus trichocarpa]                          100   9e-20
ref|XP_003607845.1| Glucan endo-1,3-beta-glucosidase [Medicago t...    99   3e-19
emb|CBI23036.3| unnamed protein product [Vitis vinifera]               98   6e-19

>ref|XP_002298356.1| glycoside hydrolase [Populus trichocarpa]
           gi|222845614|gb|EEE83161.1| glycoside hydrolase [Populus
           trichocarpa]
          Length = 457

 Score =  105 bits (263), Expect = 3e-21
 Identities = 47/90 (52%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
 Frame = -2

Query: 270 MTPVYDIGILRSEGEL-PMPVRSTVPPEVPDPGQMKQWCIPKLNADIKALQENIDFVCSQ 94
           +TPVYD+GILR +  L P P  +   P    PG+ +QWC+PK +A   ALQ+NID+VCS 
Sbjct: 333 LTPVYDVGILRDDKALAPTPGTAADAPSSSSPGRQRQWCVPKSDASDDALQKNIDYVCSN 392

Query: 93  GLDCNPILPGGICFSPDITRAHAAYAMNEY 4
           G+DC PI  GG CF PD  ++HA+YAMN +
Sbjct: 393 GVDCKPIQQGGPCFVPDTVKSHASYAMNAF 422


>ref|XP_002312097.1| predicted protein [Populus trichocarpa] gi|222851917|gb|EEE89464.1|
           predicted protein [Populus trichocarpa]
          Length = 448

 Score =  100 bits (250), Expect = 9e-20
 Identities = 47/89 (52%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
 Frame = -2

Query: 267 TPVYDIGILRS-EGELPMPVRSTVPPEVPDPGQMKQWCIPKLNADIKALQENIDFVCSQG 91
           TPVYD+GI+R+ +   P P         P P + K+WC+PK +A  KALQ NID+VCSQG
Sbjct: 337 TPVYDVGIMRNGQSSRPTP---------PSPTKSKKWCVPKADATDKALQANIDYVCSQG 387

Query: 90  LDCNPILPGGICFSPDITRAHAAYAMNEY 4
           +DC PI  GG CFSP+  R+HA+Y MN Y
Sbjct: 388 MDCKPIQAGGACFSPNNIRSHASYIMNSY 416


>gb|ABK95730.1| unknown [Populus trichocarpa]
          Length = 448

 Score =  100 bits (250), Expect = 9e-20
 Identities = 47/89 (52%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
 Frame = -2

Query: 267 TPVYDIGILRS-EGELPMPVRSTVPPEVPDPGQMKQWCIPKLNADIKALQENIDFVCSQG 91
           TPVYD+GI+R+ +   P P         P P + K+WC+PK +A  KALQ NID+VCSQG
Sbjct: 337 TPVYDVGIMRNGQSSRPTP---------PSPTKSKKWCVPKADATDKALQANIDYVCSQG 387

Query: 90  LDCNPILPGGICFSPDITRAHAAYAMNEY 4
           +DC PI  GG CFSP+  R+HA+Y MN Y
Sbjct: 388 MDCKPIQAGGACFSPNNIRSHASYIMNSY 416


>ref|XP_003607845.1| Glucan endo-1,3-beta-glucosidase [Medicago truncatula]
           gi|355508900|gb|AES90042.1| Glucan
           endo-1,3-beta-glucosidase [Medicago truncatula]
          Length = 512

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 48/102 (47%), Positives = 60/102 (58%), Gaps = 13/102 (12%)
 Frame = -2

Query: 270 MTPVYDIGILRSEGELPMPVRSTV-------------PPEVPDPGQMKQWCIPKLNADIK 130
           +TPVYD+G+L  + +  M   S               P E P+    K+WC+PK NA  K
Sbjct: 334 LTPVYDVGVLTQKHQQAMGPASGPTAMGPASGPTAMGPSESPESSPSKKWCVPKTNASEK 393

Query: 129 ALQENIDFVCSQGLDCNPILPGGICFSPDITRAHAAYAMNEY 4
           ALQ NID+VCS G+DC PI  GG C+ PD  R+HAAYAMN Y
Sbjct: 394 ALQANIDYVCSHGIDCGPIKNGGPCYKPDSLRSHAAYAMNAY 435


>emb|CBI23036.3| unnamed protein product [Vitis vinifera]
          Length = 461

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 51/96 (53%), Positives = 60/96 (62%), Gaps = 7/96 (7%)
 Frame = -2

Query: 270 MTPVYDIGILR--SEGELPM-PVRSTVPPEVPDPGQM----KQWCIPKLNADIKALQENI 112
           +TPVYDIGI+R  +   +P  P  +  P   P P Q     KQWC+P  +A   ALQ+NI
Sbjct: 332 LTPVYDIGIMRPTARASIPWNPAPAAAPQLGPAPQQHPKGGKQWCLPTSDAHSDALQKNI 391

Query: 111 DFVCSQGLDCNPILPGGICFSPDITRAHAAYAMNEY 4
           D+VC  GLDC PI  GG CF PD  RAHAAYAMN Y
Sbjct: 392 DYVCGLGLDCKPIQEGGACFIPDTVRAHAAYAMNAY 427


Top