BLASTX nr result

ID: Dioscorea21_contig00035189 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00035189
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267650.2| PREDICTED: ABC transporter C family member 1...   182   2e-44
emb|CBI22551.3| unnamed protein product [Vitis vinifera]              182   2e-44
emb|CAN76203.1| hypothetical protein VITISV_018996 [Vitis vinifera]   182   2e-44
ref|XP_002318362.1| multidrug resistance protein ABC transporter...   181   7e-44
ref|XP_004164697.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor...   180   1e-43

>ref|XP_002267650.2| PREDICTED: ABC transporter C family member 10-like [Vitis vinifera]
          Length = 1532

 Score =  182 bits (463), Expect = 2e-44
 Identities = 84/102 (82%), Positives = 95/102 (93%)
 Frame = -1

Query: 338  QNQCTLANYIISVERLNQYMHISSESPEVIEANQPPPTWPAIGKVELLDLKIQYRPDTPL 159
            QNQC LANYIISVERLNQYMHI SE+PEVIE ++PPP WPA+G+V++ DL+I+YRPDTPL
Sbjct: 1242 QNQCILANYIISVERLNQYMHIPSEAPEVIEGSRPPPNWPAVGRVDIHDLQIRYRPDTPL 1301

Query: 158  VLQGINCTFEGGHKIGIVGRTGSGKTTLISALFRLVEPVGGR 33
            VL+GINCTFEGGHKIGIVGRTGSGKTTLI ALFRLVEP GG+
Sbjct: 1302 VLRGINCTFEGGHKIGIVGRTGSGKTTLIGALFRLVEPAGGK 1343


>emb|CBI22551.3| unnamed protein product [Vitis vinifera]
          Length = 1395

 Score =  182 bits (463), Expect = 2e-44
 Identities = 84/102 (82%), Positives = 95/102 (93%)
 Frame = -1

Query: 338  QNQCTLANYIISVERLNQYMHISSESPEVIEANQPPPTWPAIGKVELLDLKIQYRPDTPL 159
            QNQC LANYIISVERLNQYMHI SE+PEVIE ++PPP WPA+G+V++ DL+I+YRPDTPL
Sbjct: 1105 QNQCILANYIISVERLNQYMHIPSEAPEVIEGSRPPPNWPAVGRVDIHDLQIRYRPDTPL 1164

Query: 158  VLQGINCTFEGGHKIGIVGRTGSGKTTLISALFRLVEPVGGR 33
            VL+GINCTFEGGHKIGIVGRTGSGKTTLI ALFRLVEP GG+
Sbjct: 1165 VLRGINCTFEGGHKIGIVGRTGSGKTTLIGALFRLVEPAGGK 1206


>emb|CAN76203.1| hypothetical protein VITISV_018996 [Vitis vinifera]
          Length = 1480

 Score =  182 bits (463), Expect = 2e-44
 Identities = 84/102 (82%), Positives = 95/102 (93%)
 Frame = -1

Query: 338  QNQCTLANYIISVERLNQYMHISSESPEVIEANQPPPTWPAIGKVELLDLKIQYRPDTPL 159
            QNQC LANYIISVERLNQYMHI SE+PEVIE ++PPP WPA+G+V++ DL+I+YRPDTPL
Sbjct: 1190 QNQCILANYIISVERLNQYMHIPSEAPEVIEGSRPPPNWPAVGRVDIHDLQIRYRPDTPL 1249

Query: 158  VLQGINCTFEGGHKIGIVGRTGSGKTTLISALFRLVEPVGGR 33
            VL+GINCTFEGGHKIGIVGRTGSGKTTLI ALFRLVEP GG+
Sbjct: 1250 VLRGINCTFEGGHKIGIVGRTGSGKTTLIGALFRLVEPAGGK 1291


>ref|XP_002318362.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222859035|gb|EEE96582.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1240

 Score =  181 bits (458), Expect = 7e-44
 Identities = 83/102 (81%), Positives = 94/102 (92%)
 Frame = -1

Query: 338  QNQCTLANYIISVERLNQYMHISSESPEVIEANQPPPTWPAIGKVELLDLKIQYRPDTPL 159
            QNQC +ANYIISVERLNQYMHI SE+PEV+E N+PP  WPA+GKV++ DL+I+YRPDTPL
Sbjct: 960  QNQCMVANYIISVERLNQYMHIPSEAPEVVEDNRPPSNWPAVGKVDICDLQIRYRPDTPL 1019

Query: 158  VLQGINCTFEGGHKIGIVGRTGSGKTTLISALFRLVEPVGGR 33
            VLQGI+CTFEGGHKIGIVGRTGSGKTTLI ALFRLVEP GG+
Sbjct: 1020 VLQGISCTFEGGHKIGIVGRTGSGKTTLIGALFRLVEPAGGK 1061


>ref|XP_004164697.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter C family member
            10-like [Cucumis sativus]
          Length = 1479

 Score =  180 bits (456), Expect = 1e-43
 Identities = 81/102 (79%), Positives = 97/102 (95%)
 Frame = -1

Query: 338  QNQCTLANYIISVERLNQYMHISSESPEVIEANQPPPTWPAIGKVELLDLKIQYRPDTPL 159
            QNQC LAN+IISVERLNQYMH+SSE+P++IEAN+PP  WP+IGKVE++DLKI+YRP+TPL
Sbjct: 1189 QNQCNLANHIISVERLNQYMHLSSEAPKIIEANRPPSNWPSIGKVEIIDLKIRYRPNTPL 1248

Query: 158  VLQGINCTFEGGHKIGIVGRTGSGKTTLISALFRLVEPVGGR 33
            VL GI+CTFEGGHKIGIVGRTGSGK+TL+SA+FRLVEP GG+
Sbjct: 1249 VLHGISCTFEGGHKIGIVGRTGSGKSTLLSAIFRLVEPAGGK 1290


Top