BLASTX nr result

ID: Dioscorea21_contig00035186 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00035186
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634123.1| PREDICTED: UDP-N-acetylmuramate--L-alanine l...   107   1e-21
emb|CBI22661.3| unnamed protein product [Vitis vinifera]              107   1e-21
ref|XP_002967103.1| hypothetical protein SELMODRAFT_408505 [Sela...    69   3e-10
dbj|BAE45866.1| UDP-N-acetylmuramate-alanine ligase [Physcomitre...    60   2e-07
ref|XP_001776739.1| predicted protein [Physcomitrella patens sub...    60   2e-07

>ref|XP_003634123.1| PREDICTED: UDP-N-acetylmuramate--L-alanine ligase-like [Vitis
           vinifera]
          Length = 541

 Score =  107 bits (267), Expect = 1e-21
 Identities = 52/98 (53%), Positives = 67/98 (68%)
 Frame = +2

Query: 17  NAQITNQGYSVTTYGISSKNDWHASSITSNLQGGLDYVLHHKGCPVANISLMLTGDHNVL 196
           N+   + GY +TT+GIS  N+WHA SI  N QGG D+VL H+G PVANI+L + G HNVL
Sbjct: 271 NSDKCSDGYRITTFGISRTNEWHALSIRPNSQGGSDFVLCHRGYPVANITLQIPGVHNVL 330

Query: 197 NSLAVIATITTMFDGKRNMHDTINAMSHHLAKFEGVSR 310
           NSLAVIAT+  +    R  +++IN +  HL  F GVSR
Sbjct: 331 NSLAVIATVMALVSDGRQSYESINCVKIHLNNFVGVSR 368


>emb|CBI22661.3| unnamed protein product [Vitis vinifera]
          Length = 626

 Score =  107 bits (267), Expect = 1e-21
 Identities = 52/98 (53%), Positives = 67/98 (68%)
 Frame = +2

Query: 17  NAQITNQGYSVTTYGISSKNDWHASSITSNLQGGLDYVLHHKGCPVANISLMLTGDHNVL 196
           N+   + GY +TT+GIS  N+WHA SI  N QGG D+VL H+G PVANI+L + G HNVL
Sbjct: 298 NSDKCSDGYRITTFGISRTNEWHALSIRPNSQGGSDFVLCHRGYPVANITLQIPGVHNVL 357

Query: 197 NSLAVIATITTMFDGKRNMHDTINAMSHHLAKFEGVSR 310
           NSLAVIAT+  +    R  +++IN +  HL  F GVSR
Sbjct: 358 NSLAVIATVMALVSDGRQSYESINCVKIHLNNFVGVSR 395


>ref|XP_002967103.1| hypothetical protein SELMODRAFT_408505 [Selaginella moellendorffii]
           gi|300165094|gb|EFJ31702.1| hypothetical protein
           SELMODRAFT_408505 [Selaginella moellendorffii]
          Length = 521

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 10/106 (9%)
 Frame = +2

Query: 23  QITNQGYSVTTYGISSKNDWHASSITSNLQGGLDYVLHHKGCPVANISLMLTGDHNVLNS 202
           Q + Q     TYG+  +NDW A  +  N+ GG DYV  ++  P+A +SL L G +NVLNS
Sbjct: 263 QYSKQASRKLTYGLHEQNDWRAIMLVPNILGGTDYVAVYRNRPMARVSLKLPGTYNVLNS 322

Query: 203 LAVIATITTM-FDGK---------RNMHDTINAMSHHLAKFEGVSR 310
           LAV+A ++ + F GK         + M     A S  L  F+G+ R
Sbjct: 323 LAVLAAVSLLAFKGKGSCDESGQLKAMAVAAQAASSALQSFQGLRR 368


>dbj|BAE45866.1| UDP-N-acetylmuramate-alanine ligase [Physcomitrella patens]
          Length = 615

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 36/96 (37%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
 Frame = +2

Query: 47  VTTYGISSKNDWHASSITSNLQGGLDYVLHHKGCPVANISLMLTGDHNVLNSLAVIATIT 226
           V T+G+ + +DW A  +  N QGG DY + +K  P+  +SL L G +NVLNSLAVI  ++
Sbjct: 364 VVTFGLGA-SDWRAIMLVPNPQGGTDYTVVYKNRPMTRVSLRLPGMYNVLNSLAVIVVMS 422

Query: 227 TMFDGKRN--------MHDTINAMSHHLAKFEGVSR 310
            +   K +        M  T  A    L  F GV R
Sbjct: 423 LLAAEKESDVGAQAKLMKRTAEAAGRALGAFSGVRR 458


>ref|XP_001776739.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162671888|gb|EDQ58433.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 680

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 36/96 (37%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
 Frame = +2

Query: 47  VTTYGISSKNDWHASSITSNLQGGLDYVLHHKGCPVANISLMLTGDHNVLNSLAVIATIT 226
           V T+G+ + +DW A  +  N QGG DY + +K  P+  +SL L G +NVLNSLAVI  ++
Sbjct: 429 VVTFGLGA-SDWRAIMLVPNPQGGTDYTVVYKNRPMTRVSLRLPGMYNVLNSLAVIVVMS 487

Query: 227 TMFDGKRN--------MHDTINAMSHHLAKFEGVSR 310
            +   K +        M  T  A    L  F GV R
Sbjct: 488 LLAAEKESDVGAQAKLMKRTAEAAGRALGAFSGVRR 523


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