BLASTX nr result
ID: Dioscorea21_contig00035172
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00035172 (324 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI36035.3| unnamed protein product [Vitis vinifera] 75 4e-12 ref|XP_002277638.1| PREDICTED: DNA repair protein RadA homolog [... 75 4e-12 ref|NP_001056828.1| Os06g0151600 [Oryza sativa Japonica Group] g... 75 7e-12 ref|XP_002436490.1| hypothetical protein SORBIDRAFT_10g003620 [S... 75 7e-12 gb|EAZ35849.1| hypothetical protein OsJ_20147 [Oryza sativa Japo... 75 7e-12 >emb|CBI36035.3| unnamed protein product [Vitis vinifera] Length = 583 Score = 75.5 bits (184), Expect = 4e-12 Identities = 37/50 (74%), Positives = 45/50 (90%), Gaps = 1/50 (2%) Frame = -2 Query: 323 IDKRVMSVAKLGYKKCIVPKAVEKSLADL-NLDIEIVGCRNLKEVINTIF 177 ++KRV +VAKLGYKKCIVPKA EKSL L +++IEIVGCRN+KEVINT+F Sbjct: 533 MEKRVNTVAKLGYKKCIVPKAAEKSLPTLEDMNIEIVGCRNMKEVINTVF 582 >ref|XP_002277638.1| PREDICTED: DNA repair protein RadA homolog [Vitis vinifera] Length = 624 Score = 75.5 bits (184), Expect = 4e-12 Identities = 37/50 (74%), Positives = 45/50 (90%), Gaps = 1/50 (2%) Frame = -2 Query: 323 IDKRVMSVAKLGYKKCIVPKAVEKSLADL-NLDIEIVGCRNLKEVINTIF 177 ++KRV +VAKLGYKKCIVPKA EKSL L +++IEIVGCRN+KEVINT+F Sbjct: 574 MEKRVNTVAKLGYKKCIVPKAAEKSLPTLEDMNIEIVGCRNMKEVINTVF 623 >ref|NP_001056828.1| Os06g0151600 [Oryza sativa Japonica Group] gi|53791424|dbj|BAD13707.2| RadA-like protein [Oryza sativa Japonica Group] gi|55296625|dbj|BAD69327.1| putative RadA [Oryza sativa Japonica Group] gi|55297278|dbj|BAD69063.1| putative RadA [Oryza sativa Japonica Group] gi|113594868|dbj|BAF18742.1| Os06g0151600 [Oryza sativa Japonica Group] gi|215736826|dbj|BAG95755.1| unnamed protein product [Oryza sativa Japonica Group] Length = 619 Score = 74.7 bits (182), Expect = 7e-12 Identities = 33/50 (66%), Positives = 43/50 (86%) Frame = -2 Query: 323 IDKRVMSVAKLGYKKCIVPKAVEKSLADLNLDIEIVGCRNLKEVINTIFQ 174 +DKRV+++AKLGYKKC+VPK EK L LNL++EI+ C NLKEVINT+F+ Sbjct: 567 MDKRVLAIAKLGYKKCVVPKTSEKLLRPLNLELEILPCSNLKEVINTVFR 616 >ref|XP_002436490.1| hypothetical protein SORBIDRAFT_10g003620 [Sorghum bicolor] gi|241914713|gb|EER87857.1| hypothetical protein SORBIDRAFT_10g003620 [Sorghum bicolor] Length = 673 Score = 74.7 bits (182), Expect = 7e-12 Identities = 34/49 (69%), Positives = 42/49 (85%) Frame = -2 Query: 323 IDKRVMSVAKLGYKKCIVPKAVEKSLADLNLDIEIVGCRNLKEVINTIF 177 +DKRVM++AKLGYKKC+VPK EK L L+LDIEI+ C NLK+VINT+F Sbjct: 621 MDKRVMAIAKLGYKKCVVPKTSEKLLRPLDLDIEILPCSNLKQVINTVF 669 >gb|EAZ35849.1| hypothetical protein OsJ_20147 [Oryza sativa Japonica Group] Length = 625 Score = 74.7 bits (182), Expect = 7e-12 Identities = 33/50 (66%), Positives = 43/50 (86%) Frame = -2 Query: 323 IDKRVMSVAKLGYKKCIVPKAVEKSLADLNLDIEIVGCRNLKEVINTIFQ 174 +DKRV+++AKLGYKKC+VPK EK L LNL++EI+ C NLKEVINT+F+ Sbjct: 573 MDKRVLAIAKLGYKKCVVPKTSEKLLRPLNLELEILPCSNLKEVINTVFR 622