BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00035168
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512769.1| pentatricopeptide repeat-containing protein,...   100   9e-20
ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containi...    88   6e-16
ref|XP_003623854.1| Pentatricopeptide repeat-containing protein ...    84   9e-15
gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]    84   9e-15
ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containi...    82   3e-14

>ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547780|gb|EEF49272.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 684

 Score =  100 bits (250), Expect = 9e-20
 Identities = 54/83 (65%), Positives = 64/83 (77%)
 Frame = +1

Query: 1   IYSKLQSETNLKPDGFVLLSLAKACAASEDLVKAMEIHRDVIRFGFSLDLPLANCLIDMY 180
           IYS L S  N++PD FVLLS+AKACAAS DLV A +IH D I+FGF+ DL L N LIDM+
Sbjct: 64  IYSTLLSR-NVRPDKFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMF 122

Query: 181 GKCGCVEGSRKVFDEMLDKDVVS 249
           GKC  V G+R VFD+M+ KDVVS
Sbjct: 123 GKCKFVNGARCVFDDMVVKDVVS 145


>ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera] gi|297736133|emb|CBI24171.3| unnamed
           protein product [Vitis vinifera]
          Length = 687

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 41/82 (50%), Positives = 57/82 (69%)
 Frame = +1

Query: 4   YSKLQSETNLKPDGFVLLSLAKACAASEDLVKAMEIHRDVIRFGFSLDLPLANCLIDMYG 183
           Y+  + +  ++PD  +LLS+AKACA+  D++ A  +H D IRFGF  D+ L N LIDMYG
Sbjct: 65  YNDFRHKNCVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYG 124

Query: 184 KCGCVEGSRKVFDEMLDKDVVS 249
           KC C EG+R VF+ M  +DV+S
Sbjct: 125 KCRCSEGARLVFEGMPFRDVIS 146



 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 30/83 (36%), Positives = 44/83 (53%)
 Frame = +1

Query: 1   IYSKLQSETNLKPDGFVLLSLAKACAASEDLVKAMEIHRDVIRFGFSLDLPLANCLIDMY 180
           + S++Q+ +  KP+   + S+  AC   E L    +IH  + R  F  DL     L+ MY
Sbjct: 302 VLSRMQN-SGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMY 360

Query: 181 GKCGCVEGSRKVFDEMLDKDVVS 249
            KCG +E SR+VF  M  +D VS
Sbjct: 361 AKCGDLELSRRVFSMMTKRDTVS 383


>ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355498869|gb|AES80072.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 865

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 43/83 (51%), Positives = 56/83 (67%)
 Frame = +1

Query: 1   IYSKLQSETNLKPDGFVLLSLAKACAASEDLVKAMEIHRDVIRFGFSLDLPLANCLIDMY 180
           IYS LQ E  +KPD  V L+ AKACA S D ++  E+H D  R G   D+ + N LI  Y
Sbjct: 151 IYSSLQ-ERGIKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAY 209

Query: 181 GKCGCVEGSRKVFDEMLDKDVVS 249
           GKC CVEG+R+VFD+++ +DVVS
Sbjct: 210 GKCKCVEGARRVFDDLVVRDVVS 232



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 28/75 (37%), Positives = 43/75 (57%)
 Frame = +1

Query: 25  TNLKPDGFVLLSLAKACAASEDLVKAMEIHRDVIRFGFSLDLPLANCLIDMYGKCGCVEG 204
           + +KP+   + S+  ACA  +DL    EIH   +R G  ++L + + L+ +Y KC  V  
Sbjct: 259 SGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVRE 318

Query: 205 SRKVFDEMLDKDVVS 249
           +R VFD M  +DVVS
Sbjct: 319 ARMVFDLMPHRDVVS 333


>gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 687

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 43/83 (51%), Positives = 56/83 (67%)
 Frame = +1

Query: 1   IYSKLQSETNLKPDGFVLLSLAKACAASEDLVKAMEIHRDVIRFGFSLDLPLANCLIDMY 180
           IYS LQ E  +KPD  V L+ AKACA S D ++  E+H D  R G   D+ + N LI  Y
Sbjct: 65  IYSSLQ-ERGIKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAY 123

Query: 181 GKCGCVEGSRKVFDEMLDKDVVS 249
           GKC CVEG+R+VFD+++ +DVVS
Sbjct: 124 GKCKCVEGARRVFDDLVVRDVVS 146



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 28/75 (37%), Positives = 43/75 (57%)
 Frame = +1

Query: 25  TNLKPDGFVLLSLAKACAASEDLVKAMEIHRDVIRFGFSLDLPLANCLIDMYGKCGCVEG 204
           + +KP+   + S+  ACA  +DL    EIH   +R G  ++L + + L+ +Y KC  V  
Sbjct: 173 SGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVRE 232

Query: 205 SRKVFDEMLDKDVVS 249
           +R VFD M  +DVVS
Sbjct: 233 ARMVFDLMPHRDVVS 247


>ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Glycine max]
          Length = 741

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 41/83 (49%), Positives = 55/83 (66%)
 Frame = +1

Query: 1   IYSKLQSETNLKPDGFVLLSLAKACAASEDLVKAMEIHRDVIRFGFSLDLPLANCLIDMY 180
           +Y+ L++   +KP   V L++AKAC AS D  +  E+H D IR G   D  L N LI  Y
Sbjct: 119 LYASLRAR-GIKPHNSVFLTVAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAY 177

Query: 181 GKCGCVEGSRKVFDEMLDKDVVS 249
           GKC CVEG+R+VFD+++ KDVVS
Sbjct: 178 GKCKCVEGARRVFDDLVVKDVVS 200