BLASTX nr result
ID: Dioscorea21_contig00035160
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00035160
(618 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004147372.1| PREDICTED: pentatricopeptide repeat-containi... 198 6e-49
ref|XP_003576175.1| PREDICTED: pentatricopeptide repeat-containi... 196 2e-48
ref|XP_002274999.1| PREDICTED: pentatricopeptide repeat-containi... 193 2e-47
ref|XP_002306238.1| predicted protein [Populus trichocarpa] gi|2... 192 4e-47
emb|CAN71191.1| hypothetical protein VITISV_019119 [Vitis vinifera] 191 9e-47
>ref|XP_004147372.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 502
Score = 198 bits (504), Expect = 6e-49
Identities = 101/205 (49%), Positives = 133/205 (64%)
Frame = -1
Query: 615 CASSDLFLARQVFDQMRQRTMHAWNILFSSYAQSSLYHLVLGLLRPFLDSGFRPDHFTVP 436
C L AR VFD+M R MH+WNIL +SY +S Y L + F GF PDH+T+P
Sbjct: 53 CKCGFLHDARNVFDKMAHRNMHSWNILIASYVHNSFYFDALNVFNEFRHLGFLPDHYTLP 112
Query: 435 AFCKACGGGGVGLREIGMGLHCWAIKIGVFDVVFVCSSVLDMYAKFGRLDDACKVFELMP 256
KA G+G +G LHCW IK+G V V S+VLD YAK G + DA KVF+ M
Sbjct: 113 QMFKA--SVGIGDAYLGKRLHCWTIKLGFVGYVVVGSTVLDFYAKCGIVGDARKVFDDMI 170
Query: 255 ERDVVAWNAMITGFVRAGQFAESLDLFRRLQLERMGMDWRVIPSVLNACGSTGELIRGKE 76
+D V+WN+MI+G+ RAG + ++LD F+R+ LE MD+ IPSVLNACG G+L +GKE
Sbjct: 171 FKDTVSWNSMISGYGRAGVYMDALDCFKRMLLEGANMDFMTIPSVLNACGGEGDLRKGKE 230
Query: 75 VHGRVIRCLVFDSDVVIGNALIDMY 1
+H V++ VF +DV +GN+LIDMY
Sbjct: 231 IHCLVLKSPVFAADVAVGNSLIDMY 255
Score = 87.8 bits (216), Expect = 1e-15
Identities = 59/188 (31%), Positives = 99/188 (52%), Gaps = 1/188 (0%)
Frame = -1
Query: 591 ARQVFDQMRQRTMHAWNILFSSYAQSSLYHLVLGLLRPFLDSGFRPDHFTVPAFCKACGG 412
AR+VFD M + +WN + S Y ++ +Y L + L G D T+P+ ACGG
Sbjct: 162 ARKVFDDMIFKDTVSWNSMISGYGRAGVYMDALDCFKRMLLEGANMDFMTIPSVLNACGG 221
Query: 411 GGVGLREIGMGLHCWAIKIGVFDV-VFVCSSVLDMYAKFGRLDDACKVFELMPERDVVAW 235
G LR+ G +HC +K VF V V +S++DMY+K G L ++ KVF M ++V W
Sbjct: 222 EG-DLRK-GKEIHCLVLKSPVFAADVAVGNSLIDMYSKCGSLLNSEKVFWNMSRLNIVTW 279
Query: 234 NAMITGFVRAGQFAESLDLFRRLQLERMGMDWRVIPSVLNACGSTGELIRGKEVHGRVIR 55
MI+ + G+ +SL LF +++ + + + ++L +C G + G R+ +
Sbjct: 280 TTMISCYGAHGKGEKSLVLFNKMKDCGIQPNSVTLTAILASCSHAGYINEG----WRIFQ 335
Query: 54 CLVFDSDV 31
++ D+ V
Sbjct: 336 SIISDNKV 343
>ref|XP_003576175.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Brachypodium distachyon]
Length = 500
Score = 196 bits (499), Expect = 2e-48
Identities = 104/207 (50%), Positives = 139/207 (67%), Gaps = 2/207 (0%)
Frame = -1
Query: 615 CASSDLFLARQVFDQMRQRTMHAWNILFSSYAQSSLYHLVLGLLRPFLDSGFRPDHFTVP 436
C + L AR+VFD M +MHA+NIL ++ + L+ GL+ +GFRPD + VP
Sbjct: 52 CRCAALPCARKVFDAMPSPSMHAYNILLAASPPRAALELLSGLIA----AGFRPDRYAVP 107
Query: 435 AFCKACGGGGVGLREIGMGLHCWAIKIGVFDVVFVCSSVLDMYAKFGRLDDACKVFELMP 256
A +AC L +G LH +A++ G V V S++LDMYAK G LD+A +VF+ MP
Sbjct: 108 AALRACAELQDPL--LGAVLHGFAVQFGFLGNVVVSSALLDMYAKSGLLDNAARVFDEMP 165
Query: 255 ERDVVAWNAMITGFVRAGQFAESLDLFRRLQLE--RMGMDWRVIPSVLNACGSTGELIRG 82
E+D V WN M+T + RAG AE+L++FRR Q+E M D R +PSVLNACG GEL++G
Sbjct: 166 EKDSVVWNCMVTAYARAGMAAETLEIFRRAQVEVVNMARDLRSVPSVLNACGKEGELMKG 225
Query: 81 KEVHGRVIRCLVFDSDVVIGNALIDMY 1
+E+HGR++RCL FDSDV IGNALIDMY
Sbjct: 226 REIHGRMVRCLAFDSDVPIGNALIDMY 252
Score = 73.6 bits (179), Expect = 3e-11
Identities = 49/176 (27%), Positives = 95/176 (53%), Gaps = 3/176 (1%)
Frame = -1
Query: 591 ARQVFDQMRQRTMHAWNILFSSYAQSSLYHLVLGLLRPFLDS--GFRPDHFTVPAFCKAC 418
A +VFD+M ++ WN + ++YA++ + L + R D +VP+ AC
Sbjct: 157 AARVFDEMPEKDSVVWNCMVTAYARAGMAAETLEIFRRAQVEVVNMARDLRSVPSVLNAC 216
Query: 417 GGGGVGLREIGMGLHCWAIKIGVFDV-VFVCSSVLDMYAKFGRLDDACKVFELMPERDVV 241
G G ++ G +H ++ FD V + ++++DMYAK G +D + VF M ER+VV
Sbjct: 217 GKEGELMK--GREIHGRMVRCLAFDSDVPIGNALIDMYAKCGHVDASRAVFAGMLERNVV 274
Query: 240 AWNAMITGFVRAGQFAESLDLFRRLQLERMGMDWRVIPSVLNACGSTGELIRGKEV 73
+W+ +I+ + G+ E+L +++ + +R+ + SVL++C +G + G+ +
Sbjct: 275 SWSTLISCYGVHGKGKEALRIYKEMLSQRVKPNGITFMSVLSSCSHSGLVTDGRMI 330
>ref|XP_002274999.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera] gi|296088567|emb|CBI37558.3| unnamed
protein product [Vitis vinifera]
Length = 492
Score = 193 bits (490), Expect = 2e-47
Identities = 97/197 (49%), Positives = 131/197 (66%)
Frame = -1
Query: 591 ARQVFDQMRQRTMHAWNILFSSYAQSSLYHLVLGLLRPFLDSGFRPDHFTVPAFCKACGG 412
AR+VFD+M +R MH+WNIL +SYA + ++ LG+ FL GFRPDHFT+P KAC G
Sbjct: 60 ARKVFDKMVERNMHSWNILIASYAHNCFFYDALGVFDSFLKMGFRPDHFTLPPVFKACAG 119
Query: 411 GGVGLREIGMGLHCWAIKIGVFDVVFVCSSVLDMYAKFGRLDDACKVFELMPERDVVAWN 232
+G +G LH W I+IG + V V SSVLD YAK G L DA + F M RD V WN
Sbjct: 120 --IGDSYLGKMLHSWVIRIGFEEYVVVGSSVLDFYAKCGGLVDAWRCFVNMSWRDSVVWN 177
Query: 231 AMITGFVRAGQFAESLDLFRRLQLERMGMDWRVIPSVLNACGSTGELIRGKEVHGRVIRC 52
MI G +A F ++L+ FR + E + MD R +PS+L+ CG G+L++GKE+HG+V++
Sbjct: 178 LMIVGLGKACFFRDALECFRDMLSEGVKMDSRTVPSILSVCGGEGDLMKGKEIHGQVVKN 237
Query: 51 LVFDSDVVIGNALIDMY 1
+F +V IGN+LIDMY
Sbjct: 238 QIFGCEVAIGNSLIDMY 254
Score = 82.0 bits (201), Expect = 8e-14
Identities = 51/174 (29%), Positives = 90/174 (51%), Gaps = 1/174 (0%)
Frame = -1
Query: 591 ARQVFDQMRQRTMHAWNILFSSYAQSSLYHLVLGLLRPFLDSGFRPDHFTVPAFCKACGG 412
A + F M R WN++ ++ + L R L G + D TVP+ CGG
Sbjct: 161 AWRCFVNMSWRDSVVWNLMIVGLGKACFFRDALECFRDMLSEGVKMDSRTVPSILSVCGG 220
Query: 411 GGVGLREIGMGLHCWAIKIGVFDV-VFVCSSVLDMYAKFGRLDDACKVFELMPERDVVAW 235
G ++ G +H +K +F V + +S++DMYAK G L D+ KVF M E ++V W
Sbjct: 221 EGDLMK--GKEIHGQVVKNQIFGCEVAIGNSLIDMYAKCGCLHDSEKVFTTMSELNLVTW 278
Query: 234 NAMITGFVRAGQFAESLDLFRRLQLERMGMDWRVIPSVLNACGSTGELIRGKEV 73
+MI+ + G+ E+L LF++++ + I ++L +C +G + +G+++
Sbjct: 279 TSMISCYGVHGKGHEALALFKKMKYCGFQPNCVTITAILASCSHSGLIEQGRKI 332
Score = 66.2 bits (160), Expect = 4e-09
Identities = 39/125 (31%), Positives = 65/125 (52%)
Frame = -1
Query: 375 HCWAIKIGVFDVVFVCSSVLDMYAKFGRLDDACKVFELMPERDVVAWNAMITGFVRAGQF 196
H + G + + + +L +Y+K G L DA KVF+ M ER++ +WN +I + F
Sbjct: 29 HAQILVHGFIPNITLQTDLLLVYSKCGVLQDARKVFDKMVERNMHSWNILIASYAHNCFF 88
Query: 195 AESLDLFRRLQLERMGMDWRVIPSVLNACGSTGELIRGKEVHGRVIRCLVFDSDVVIGNA 16
++L +F D +P V AC G+ GK +H VIR + F+ VV+G++
Sbjct: 89 YDALGVFDSFLKMGFRPDHFTLPPVFKACAGIGDSYLGKMLHSWVIR-IGFEEYVVVGSS 147
Query: 15 LIDMY 1
++D Y
Sbjct: 148 VLDFY 152
>ref|XP_002306238.1| predicted protein [Populus trichocarpa] gi|222855687|gb|EEE93234.1|
predicted protein [Populus trichocarpa]
Length = 512
Score = 192 bits (488), Expect = 4e-47
Identities = 101/203 (49%), Positives = 133/203 (65%)
Frame = -1
Query: 609 SSDLFLARQVFDQMRQRTMHAWNILFSSYAQSSLYHLVLGLLRPFLDSGFRPDHFTVPAF 430
S L AR+VFD+M +R MH+WNI+ SSYAQ+ Y + + FL GFRPDH+T+P
Sbjct: 54 SGFLLEARKVFDRMPERNMHSWNIMMSSYAQNYCYSDAICIFDEFLKMGFRPDHYTLPPL 113
Query: 429 CKACGGGGVGLREIGMGLHCWAIKIGVFDVVFVCSSVLDMYAKFGRLDDACKVFELMPER 250
KA G VG +G LH W I++G V V SSVLD Y K G+L +A +VF M R
Sbjct: 114 FKAVAG--VGDCYLGFVLHGWVIRLGFEGYVVVGSSVLDFYLKGGKLVEAKRVFSNMLWR 171
Query: 249 DVVAWNAMITGFVRAGQFAESLDLFRRLQLERMGMDWRVIPSVLNACGSTGELIRGKEVH 70
D WN MI+GF RAG + E+L L R + E +D V+PS+LNACG G+L++GKE+H
Sbjct: 172 DCGVWNLMISGFGRAGFYVEALSLVRNMVEEEEKLDALVVPSILNACGGEGDLMKGKEIH 231
Query: 69 GRVIRCLVFDSDVVIGNALIDMY 1
GRV++ +F+ DVVI N+LIDMY
Sbjct: 232 GRVVKSTLFNVDVVISNSLIDMY 254
Score = 91.7 bits (226), Expect = 1e-16
Identities = 53/174 (30%), Positives = 97/174 (55%), Gaps = 1/174 (0%)
Frame = -1
Query: 591 ARQVFDQMRQRTMHAWNILFSSYAQSSLYHLVLGLLRPFLDSGFRPDHFTVPAFCKACGG 412
A++VF M R WN++ S + ++ Y L L+R ++ + D VP+ ACGG
Sbjct: 161 AKRVFSNMLWRDCGVWNLMISGFGRAGFYVEALSLVRNMVEEEEKLDALVVPSILNACGG 220
Query: 411 GGVGLREIGMGLHCWAIKIGVFDV-VFVCSSVLDMYAKFGRLDDACKVFELMPERDVVAW 235
G ++ G +H +K +F+V V + +S++DMYA+ G L+D+ KVF M +VV W
Sbjct: 221 EGDLMK--GKEIHGRVVKSTLFNVDVVISNSLIDMYARCGCLNDSEKVFRNMRSLNVVTW 278
Query: 234 NAMITGFVRAGQFAESLDLFRRLQLERMGMDWRVIPSVLNACGSTGELIRGKEV 73
MI+ + G+ ESL++F++++ + + + +VL +C +G + G+ +
Sbjct: 279 TTMISCYGVHGRAEESLEVFKKMKGFGLKPNPVTLTAVLASCSHSGLIDEGRRI 332
Score = 61.2 bits (147), Expect = 1e-07
Identities = 34/109 (31%), Positives = 62/109 (56%)
Frame = -1
Query: 327 SSVLDMYAKFGRLDDACKVFELMPERDVVAWNAMITGFVRAGQFAESLDLFRRLQLERMG 148
+ +L Y+K G L +A KVF+ MPER++ +WN M++ + + +++++ +F
Sbjct: 45 TDLLLAYSKSGFLLEARKVFDRMPERNMHSWNIMMSSYAQNYCYSDAICIFDEFLKMGFR 104
Query: 147 MDWRVIPSVLNACGSTGELIRGKEVHGRVIRCLVFDSDVVIGNALIDMY 1
D +P + A G+ G +HG VIR L F+ VV+G++++D Y
Sbjct: 105 PDHYTLPPLFKAVAGVGDCYLGFVLHGWVIR-LGFEGYVVVGSSVLDFY 152
>emb|CAN71191.1| hypothetical protein VITISV_019119 [Vitis vinifera]
Length = 880
Score = 191 bits (485), Expect = 9e-47
Identities = 96/197 (48%), Positives = 130/197 (65%)
Frame = -1
Query: 591 ARQVFDQMRQRTMHAWNILFSSYAQSSLYHLVLGLLRPFLDSGFRPDHFTVPAFCKACGG 412
AR+VFD+M +R MH+WNIL +SYA + ++ LG+ FL GFRPDHFT+P KAC G
Sbjct: 490 ARKVFDKMVERNMHSWNILIASYAHNCFFYDALGVFDSFLKMGFRPDHFTLPPVFKACAG 549
Query: 411 GGVGLREIGMGLHCWAIKIGVFDVVFVCSSVLDMYAKFGRLDDACKVFELMPERDVVAWN 232
+G +G LH W I+IG + V V SSVLD Y K G L DA + F M RD V WN
Sbjct: 550 --IGDSYLGKMLHSWVIRIGFEEYVVVGSSVLDFYEKCGGLVDAWRCFVNMSWRDSVVWN 607
Query: 231 AMITGFVRAGQFAESLDLFRRLQLERMGMDWRVIPSVLNACGSTGELIRGKEVHGRVIRC 52
MI G +A F ++L+ FR + E + MD R +PS+L+ CG G+L++GKE+HG+V++
Sbjct: 608 LMIVGLGKACFFRDALECFRDMLSEGVKMDSRTVPSILSVCGGEGDLMKGKEIHGQVVKN 667
Query: 51 LVFDSDVVIGNALIDMY 1
+F +V IGN+LIDMY
Sbjct: 668 QIFGCEVAIGNSLIDMY 684
Score = 66.2 bits (160), Expect = 4e-09
Identities = 39/125 (31%), Positives = 65/125 (52%)
Frame = -1
Query: 375 HCWAIKIGVFDVVFVCSSVLDMYAKFGRLDDACKVFELMPERDVVAWNAMITGFVRAGQF 196
H + G + + + +L +Y+K G L DA KVF+ M ER++ +WN +I + F
Sbjct: 459 HAQILVHGFIPNITLQTDLLLVYSKCGVLQDARKVFDKMVERNMHSWNILIASYAHNCFF 518
Query: 195 AESLDLFRRLQLERMGMDWRVIPSVLNACGSTGELIRGKEVHGRVIRCLVFDSDVVIGNA 16
++L +F D +P V AC G+ GK +H VIR + F+ VV+G++
Sbjct: 519 YDALGVFDSFLKMGFRPDHFTLPPVFKACAGIGDSYLGKMLHSWVIR-IGFEEYVVVGSS 577
Query: 15 LIDMY 1
++D Y
Sbjct: 578 VLDFY 582