BLASTX nr result

ID: Dioscorea21_contig00035159 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00035159
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002489108.1| hypothetical protein SORBIDRAFT_0067s002260 ...   107   1e-21
ref|XP_002308470.1| ABC transporter family, retinal flippase sub...   105   3e-21
tpg|DAA37903.1| TPA: hypothetical protein ZEAMMB73_602133 [Zea m...   104   7e-21
tpg|DAA37902.1| TPA: hypothetical protein ZEAMMB73_602133 [Zea m...   104   7e-21
ref|XP_003581203.1| PREDICTED: ABC transporter B family member 2...   102   2e-20

>ref|XP_002489108.1| hypothetical protein SORBIDRAFT_0067s002260 [Sorghum bicolor]
           gi|241947384|gb|EES20529.1| hypothetical protein
           SORBIDRAFT_0067s002260 [Sorghum bicolor]
          Length = 464

 Score =  107 bits (266), Expect = 1e-21
 Identities = 51/116 (43%), Positives = 76/116 (65%), Gaps = 8/116 (6%)
 Frame = +2

Query: 191 PLYEISPFLRSEYRPILSGWLCSAISVCCLSTAIPCLGRVPSALAA--------ASPDRV 346
           PL ++ P++ +E+  +  GW C+A++V CLS A+P  GR+P ALA+        A+ +  
Sbjct: 73  PLADVFPYITAEWETVAKGWACAAVAVYCLSRAVPAAGRLPRALASGGGGGGGGAAVEVA 132

Query: 347 VRDGLRLAFLLSLRSVACYLQQAFLWEASLGAAYRIRVHVFDRVLEQDMGFFEGNG 514
            + G+ LA + S R+ A Y QQAFLWEA+L AA R+R   F+R+LE+D+ FFEG G
Sbjct: 133 AKGGVTLAAVASARAAAAYAQQAFLWEAALRAAGRLRERAFERLLERDLAFFEGRG 188


>ref|XP_002308470.1| ABC transporter family, retinal flippase subfamily [Populus
           trichocarpa] gi|222854446|gb|EEE91993.1| ABC transporter
           family, retinal flippase subfamily [Populus trichocarpa]
          Length = 570

 Score =  105 bits (263), Expect = 3e-21
 Identities = 52/104 (50%), Positives = 71/104 (68%)
 Frame = +2

Query: 203 ISPFLRSEYRPILSGWLCSAISVCCLSTAIPCLGRVPSALAAASPDRVVRDGLRLAFLLS 382
           I PF+ S+Y+PIL GWLCS +SV  LS  +P  G+  S++   +   +  DGL LA L  
Sbjct: 4   IKPFIFSQYKPILLGWLCSLLSVLSLSQLVPKFGQFSSSIGKINGVTLRNDGLVLAGLFL 63

Query: 383 LRSVACYLQQAFLWEASLGAAYRIRVHVFDRVLEQDMGFFEGNG 514
            + +A Y Q A LWEA+L A+Y+IRV VF+RVLE+++GFFEG G
Sbjct: 64  AKLIATYGQHALLWEAALNASYKIRVFVFERVLERELGFFEGGG 107


>tpg|DAA37903.1| TPA: hypothetical protein ZEAMMB73_602133 [Zea mays]
          Length = 361

 Score =  104 bits (260), Expect = 7e-21
 Identities = 52/114 (45%), Positives = 73/114 (64%), Gaps = 6/114 (5%)
 Frame = +2

Query: 191 PLYEISPFLRSEYRPILSGWLCSAISVCCLSTAIPCLGRVPSALAA------ASPDRVVR 352
           PL ++ P++ +E+  +  GW C+A++V CLS A+P  GR+P ALA       A+     R
Sbjct: 66  PLPDVFPYITAEWEAVAKGWACAAVAVYCLSRAVPAAGRLPRALAGGGGGGGAAVVVAAR 125

Query: 353 DGLRLAFLLSLRSVACYLQQAFLWEASLGAAYRIRVHVFDRVLEQDMGFFEGNG 514
            G+ LA   S R+ A Y QQAFLWEA+L AA R+R   F+R+LE+D+ FFEG G
Sbjct: 126 GGVALAAFASARAAATYAQQAFLWEAALQAAGRLRERAFERLLERDLEFFEGRG 179


>tpg|DAA37902.1| TPA: hypothetical protein ZEAMMB73_602133 [Zea mays]
          Length = 580

 Score =  104 bits (260), Expect = 7e-21
 Identities = 52/114 (45%), Positives = 73/114 (64%), Gaps = 6/114 (5%)
 Frame = +2

Query: 191 PLYEISPFLRSEYRPILSGWLCSAISVCCLSTAIPCLGRVPSALAA------ASPDRVVR 352
           PL ++ P++ +E+  +  GW C+A++V CLS A+P  GR+P ALA       A+     R
Sbjct: 66  PLPDVFPYITAEWEAVAKGWACAAVAVYCLSRAVPAAGRLPRALAGGGGGGGAAVVVAAR 125

Query: 353 DGLRLAFLLSLRSVACYLQQAFLWEASLGAAYRIRVHVFDRVLEQDMGFFEGNG 514
            G+ LA   S R+ A Y QQAFLWEA+L AA R+R   F+R+LE+D+ FFEG G
Sbjct: 126 GGVALAAFASARAAATYAQQAFLWEAALQAAGRLRERAFERLLERDLEFFEGRG 179


>ref|XP_003581203.1| PREDICTED: ABC transporter B family member 29, chloroplastic-like
           [Brachypodium distachyon]
          Length = 640

 Score =  102 bits (255), Expect = 2e-20
 Identities = 48/110 (43%), Positives = 73/110 (66%), Gaps = 4/110 (3%)
 Frame = +2

Query: 191 PLYEISPFLRSEYRPILSGWLCSAISVCCLSTAIPCLGRVPSALAA----ASPDRVVRDG 358
           PL E+ P++ +E+R I  GW C+A++V CLS A+P  GR+P  LAA    ++  ++ R  
Sbjct: 65  PLSEVFPYVAAEWRTIAKGWACAAVAVYCLSRAVPAAGRLPRVLAAGVGGSAEGQIPRGV 124

Query: 359 LRLAFLLSLRSVACYLQQAFLWEASLGAAYRIRVHVFDRVLEQDMGFFEG 508
           + +A L S  + A Y+QQA LWEA+L   +R+R H F+RVL +D+ FF+G
Sbjct: 125 VTVAALASAHAAAAYVQQALLWEAALRVVWRLREHAFERVLARDLAFFDG 174