BLASTX nr result

ID: Dioscorea21_contig00035157 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00035157
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315519.1| predicted protein [Populus trichocarpa] gi|2...   127   1e-27
ref|XP_004152964.1| PREDICTED: LOW QUALITY PROTEIN: condensin-2 ...   126   2e-27
ref|XP_003626059.1| Condensin-2 complex subunit D3 [Medicago tru...   123   2e-26
ref|XP_003533347.1| PREDICTED: condensin-2 complex subunit D3-li...   120   1e-25
ref|XP_003547378.1| PREDICTED: condensin-2 complex subunit D3-li...   119   2e-25

>ref|XP_002315519.1| predicted protein [Populus trichocarpa] gi|222864559|gb|EEF01690.1|
            predicted protein [Populus trichocarpa]
          Length = 1272

 Score =  127 bits (318), Expect = 1e-27
 Identities = 67/131 (51%), Positives = 86/131 (65%), Gaps = 1/131 (0%)
 Frame = +3

Query: 3    RLLQNKNSPLTGCLMDCLRVLLKDYKNEFDEILVADKQLQKELIYDIQKHETXXXXXXXX 182
            RLL++KNSPLTG LM+CLR++LKDYKNE DEILVADKQLQKELIYD+QK+ET        
Sbjct: 1103 RLLESKNSPLTGSLMECLRIILKDYKNEIDEILVADKQLQKELIYDMQKYETSKAKSAAA 1162

Query: 183  XXXXXXXRSKNHQTP-INQATPATTIYSKVSKKPGSGAKIASAMADEAAKVTARSVLEEV 359
                      +  +P  ++    T     +++ P S +++ASAMA+  A+   RSVL EV
Sbjct: 1163 VVVASMQNHSSFLSPGASKTAGGTKAQDNLNENPQSDSRVASAMANAVAEARVRSVLREV 1222

Query: 360  NRNAATPPLKS 392
            NR  ATPPL S
Sbjct: 1223 NRGIATPPLSS 1233


>ref|XP_004152964.1| PREDICTED: LOW QUALITY PROTEIN: condensin-2 complex subunit D3-like,
            partial [Cucumis sativus]
          Length = 929

 Score =  126 bits (316), Expect = 2e-27
 Identities = 67/131 (51%), Positives = 92/131 (70%), Gaps = 1/131 (0%)
 Frame = +3

Query: 3    RLLQNKNSPLTGCLMDCLRVLLKDYKNEFDEILVADKQLQKELIYDIQKHETXXXXXXXX 182
            RL+++KNSPL G LM+CLRVLLKDYKNE D++LVADKQLQKE +YDIQ++E+        
Sbjct: 762  RLMESKNSPLIGSLMECLRVLLKDYKNEIDDLLVADKQLQKESLYDIQRYESTKAKSAVA 821

Query: 183  XXXXXXXRSKNHQTPINQATP-ATTIYSKVSKKPGSGAKIASAMADEAAKVTARSVLEEV 359
                   +S N+ +P  +A P A ++ + ++ K  + +K+ASA+AD AA  TA+SVL EV
Sbjct: 822  EAVNEMQKSTNYLSP--EAPPQAVSVLNNLTSKLQNDSKVASAIADAAAAATAKSVLREV 879

Query: 360  NRNAATPPLKS 392
            NR  +TPPL S
Sbjct: 880  NRGTSTPPLGS 890


>ref|XP_003626059.1| Condensin-2 complex subunit D3 [Medicago truncatula]
            gi|355501074|gb|AES82277.1| Condensin-2 complex subunit
            D3 [Medicago truncatula]
          Length = 854

 Score =  123 bits (308), Expect = 2e-26
 Identities = 70/134 (52%), Positives = 87/134 (64%), Gaps = 5/134 (3%)
 Frame = +3

Query: 6    LLQNKNSPLTGCLMDCLRVLLKDYKNEFDEILVADKQLQKELIYDIQKHETXXXXXXXXX 185
            LL+ KNSPL G LM+CLRVLLKDYKNE D+ILVADKQLQKELIYD+QK+E          
Sbjct: 689  LLETKNSPLIGSLMECLRVLLKDYKNEIDDILVADKQLQKELIYDMQKYEAAKAKATVAE 748

Query: 186  XXXXXXRSKNHQTP-----INQATPATTIYSKVSKKPGSGAKIASAMADEAAKVTARSVL 350
                  +S  +Q+P     + +    T + +  S    SG++IASAMAD AA  TARSVL
Sbjct: 749  AIAAKPKSGANQSPDVSKNLTKEHGQTQVQNVDSDMLPSGSRIASAMADAAAASTARSVL 808

Query: 351  EEVNRNAATPPLKS 392
            +E+N+  ATP L S
Sbjct: 809  KEINKGTATPQLSS 822


>ref|XP_003533347.1| PREDICTED: condensin-2 complex subunit D3-like [Glycine max]
          Length = 1334

 Score =  120 bits (300), Expect = 1e-25
 Identities = 67/134 (50%), Positives = 87/134 (64%), Gaps = 4/134 (2%)
 Frame = +3

Query: 3    RLLQNKNSPLTGCLMDCLRVLLKDYKNEFDEILVADKQLQKELIYDIQKHETXXXXXXXX 182
            RLL+ KNSPL G LM+CLR++LKDYKNE D+ILVADKQLQKELIYDI+K+E         
Sbjct: 1164 RLLETKNSPLIGSLMECLRIILKDYKNEIDDILVADKQLQKELIYDIKKYEAAKAKATVA 1223

Query: 183  XXXXXXXRSKNHQTPINQ----ATPATTIYSKVSKKPGSGAKIASAMADEAAKVTARSVL 350
                   +S ++Q+P        T   T+    ++ P S +++ASAMA+ AA  TARSVL
Sbjct: 1224 EAVGTKPKSVSNQSPDASKNLTKTQGQTVGQSSNELP-SDSRVASAMANAAAAATARSVL 1282

Query: 351  EEVNRNAATPPLKS 392
             E+N+  ATP L S
Sbjct: 1283 REINKGTATPSLSS 1296


>ref|XP_003547378.1| PREDICTED: condensin-2 complex subunit D3-like [Glycine max]
          Length = 1324

 Score =  119 bits (299), Expect = 2e-25
 Identities = 66/133 (49%), Positives = 83/133 (62%), Gaps = 3/133 (2%)
 Frame = +3

Query: 3    RLLQNKNSPLTGCLMDCLRVLLKDYKNEFDEILVADKQLQKELIYDIQKHETXXXXXXXX 182
            RLL+ KNSPL G LM+CLR++LKDYKNE D+ILVADKQLQKELIYDIQK+E         
Sbjct: 1154 RLLETKNSPLIGSLMECLRIILKDYKNEIDDILVADKQLQKELIYDIQKYEAAKAKATVA 1213

Query: 183  XXXXXXXRSKNHQ---TPINQATPATTIYSKVSKKPGSGAKIASAMADEAAKVTARSVLE 353
                   +S ++Q      N          + S +  S +++ASA+AD AA  TARSVL 
Sbjct: 1214 EAVGTKPKSGSNQLADVSKNLTKTQEQTVGQSSNELPSDSRVASAIADTAAAATARSVLR 1273

Query: 354  EVNRNAATPPLKS 392
            E+N+   TPPL S
Sbjct: 1274 EINKGTGTPPLSS 1286


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