BLASTX nr result

ID: Dioscorea21_contig00035122 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00035122
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP49820.1| ethylene responsive transcription factor 6 [Triti...    59   4e-07
ref|XP_002460334.1| hypothetical protein SORBIDRAFT_02g026630 [S...    56   3e-06
ref|XP_003607977.1| Ethylene-responsive transcription factor [Me...    54   1e-05

>gb|AFP49820.1| ethylene responsive transcription factor 6 [Triticum durum]
          Length = 251

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 25/53 (47%), Positives = 39/53 (73%), Gaps = 3/53 (5%)
 Frame = -1

Query: 249 SQDQEQAIIISSLVHVICGDTSPATTIPGFFLP---QPCSTCGINGCLGCDLF 100
           S +QEQ++++++L+HV+ G T+PA   P FF P   + CS CG++GCLGC+ F
Sbjct: 36  SPEQEQSVLVAALLHVVSGYTTPA---PAFFFPASKEACSACGMDGCLGCEFF 85


>ref|XP_002460334.1| hypothetical protein SORBIDRAFT_02g026630 [Sorghum bicolor]
           gi|241923711|gb|EER96855.1| hypothetical protein
           SORBIDRAFT_02g026630 [Sorghum bicolor]
          Length = 294

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 24/52 (46%), Positives = 34/52 (65%)
 Frame = -1

Query: 255 LCSQDQEQAIIISSLVHVICGDTSPATTIPGFFLPQPCSTCGINGCLGCDLF 100
           L S +QE AII+++L HV+ G ++P   +      +PC  CGI+GCLGCD F
Sbjct: 49  LISHEQEDAIIVAALRHVVSGYSTPPPEVVTVAGGEPCGVCGIDGCLGCDFF 100


>ref|XP_003607977.1| Ethylene-responsive transcription factor [Medicago truncatula]
           gi|355509032|gb|AES90174.1| Ethylene-responsive
           transcription factor [Medicago truncatula]
          Length = 466

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 18/80 (22%)
 Frame = -1

Query: 282 NKTSELMTSLCSQDQEQAIIISSLVHVICGDTSPATTIPGFFLP---------------- 151
           N +S   +S    DQEQ++I+++L  V+ G TS A ++P F LP                
Sbjct: 3   NSSSSFSSSTLPSDQEQSVIVTALTKVVSGSTSTANSLPEFHLPDSTIGSSSSMERIPPT 62

Query: 150 --QPCSTCGINGCLGCDLFA 97
             + C  C I GCLGC+ F+
Sbjct: 63  NMETCRECNIAGCLGCNFFS 82


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