BLASTX nr result
ID: Dioscorea21_contig00035117
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00035117 (317 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulga... 118 6e-25 ref|XP_003604260.1| CNGC5-like protein [Medicago truncatula] gi|... 114 8e-24 dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 112 3e-23 gb|ABD64923.1| hypothetical protein 24.t00067 [Brassica oleracea] 111 5e-23 gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 110 1e-22 >emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulgaris] Length = 1365 Score = 118 bits (295), Expect = 6e-25 Identities = 54/103 (52%), Positives = 71/103 (68%) Frame = -2 Query: 316 PVTKEEVRLAVFDFPSGKSPGPDGFTAEFYKFFWSDIGDSLFDVVDHFFSTSNMHSAWGR 137 PVT+EEVR VF S K+PGPDG A FY+ WS +G+ ++ V HFF+T + W + Sbjct: 440 PVTREEVRNVVFQMGSLKAPGPDGIPAIFYQKHWSIVGEDIWRAVSHFFTTGYILQEWNQ 499 Query: 136 TSVALIPKTDNPSSVRDFRPISLCNVSYKIISKVLANRLKTVI 8 T++ LIPK + P FRPISLCNV YKIISK++ANRLK ++ Sbjct: 500 TNICLIPKVERPEQACQFRPISLCNVIYKIISKIIANRLKPIL 542 >ref|XP_003604260.1| CNGC5-like protein [Medicago truncatula] gi|355505315|gb|AES86457.1| CNGC5-like protein [Medicago truncatula] Length = 1023 Score = 114 bits (285), Expect = 8e-24 Identities = 53/100 (53%), Positives = 70/100 (70%) Frame = -2 Query: 316 PVTKEEVRLAVFDFPSGKSPGPDGFTAEFYKFFWSDIGDSLFDVVDHFFSTSNMHSAWGR 137 P+TKEE+RLA+F KSPGPDGF A F++ FWS GD +F+ + S+ Sbjct: 32 PITKEELRLALFQMHPDKSPGPDGFNATFFQRFWSLCGDEIFEATKCWMDRGFFPSSLNE 91 Query: 136 TSVALIPKTDNPSSVRDFRPISLCNVSYKIISKVLANRLK 17 T++ LIPK D+P S++D RPISLCNV YK++SK+LANRLK Sbjct: 92 TNICLIPKCDSPKSMKDMRPISLCNVLYKMLSKLLANRLK 131 >dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis thaliana] Length = 1223 Score = 112 bits (280), Expect = 3e-23 Identities = 53/105 (50%), Positives = 69/105 (65%) Frame = -2 Query: 316 PVTKEEVRLAVFDFPSGKSPGPDGFTAEFYKFFWSDIGDSLFDVVDHFFSTSNMHSAWGR 137 PVT EE+R +F PS KSPGPDG+T+EF+K W IGD V FF+ + Sbjct: 452 PVTAEEIRKVLFRMPSDKSPGPDGYTSEFFKATWEIIGDEFTLAVQSFFTKGFLPKGINS 511 Query: 136 TSVALIPKTDNPSSVRDFRPISLCNVSYKIISKVLANRLKTVIPR 2 T +ALIPK ++D+RPIS CNV YK+ISK++ANRLK V+P+ Sbjct: 512 TILALIPKKTEAREMKDYRPISCCNVLYKVISKIIANRLKLVLPK 556 >gb|ABD64923.1| hypothetical protein 24.t00067 [Brassica oleracea] Length = 381 Score = 111 bits (278), Expect = 5e-23 Identities = 49/102 (48%), Positives = 74/102 (72%) Frame = -2 Query: 313 VTKEEVRLAVFDFPSGKSPGPDGFTAEFYKFFWSDIGDSLFDVVDHFFSTSNMHSAWGRT 134 VT EEVR++VF + ++PGPDG TA FY+ +W +G ++ + V HFF+T +S T Sbjct: 230 VTAEEVRISVFSIGATRAPGPDGLTASFYQTYWDIVGPAVVEEVRHFFNTGEFYSDLNHT 289 Query: 133 SVALIPKTDNPSSVRDFRPISLCNVSYKIISKVLANRLKTVI 8 ++ LIPK NP +++DFRPI+LCNV YKIISK+L+ +K+++ Sbjct: 290 NLCLIPKITNPITMKDFRPIALCNVMYKIISKILSLCMKSIL 331 >gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1216 Score = 110 bits (275), Expect = 1e-22 Identities = 50/104 (48%), Positives = 67/104 (64%) Frame = -2 Query: 313 VTKEEVRLAVFDFPSGKSPGPDGFTAEFYKFFWSDIGDSLFDVVDHFFSTSNMHSAWGRT 134 VT EE++ +F P KSPGPDG+T+EFYK W IGD + + FF+ + T Sbjct: 174 VTGEEIKKVIFSMPKDKSPGPDGYTSEFYKASWEIIGDEVIIAIQSFFAKGFLPKGVNST 233 Query: 133 SVALIPKTDNPSSVRDFRPISLCNVSYKIISKVLANRLKTVIPR 2 +ALIPK ++D+RPIS CNV YK ISK+LANRLK ++P+ Sbjct: 234 ILALIPKKKEAREIKDYRPISCCNVLYKAISKILANRLKRILPK 277