BLASTX nr result

ID: Dioscorea21_contig00035117 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00035117
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulga...   118   6e-25
ref|XP_003604260.1| CNGC5-like protein [Medicago truncatula] gi|...   114   8e-24
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   112   3e-23
gb|ABD64923.1| hypothetical protein 24.t00067 [Brassica oleracea]     111   5e-23
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...   110   1e-22

>emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1365

 Score =  118 bits (295), Expect = 6e-25
 Identities = 54/103 (52%), Positives = 71/103 (68%)
 Frame = -2

Query: 316 PVTKEEVRLAVFDFPSGKSPGPDGFTAEFYKFFWSDIGDSLFDVVDHFFSTSNMHSAWGR 137
           PVT+EEVR  VF   S K+PGPDG  A FY+  WS +G+ ++  V HFF+T  +   W +
Sbjct: 440 PVTREEVRNVVFQMGSLKAPGPDGIPAIFYQKHWSIVGEDIWRAVSHFFTTGYILQEWNQ 499

Query: 136 TSVALIPKTDNPSSVRDFRPISLCNVSYKIISKVLANRLKTVI 8
           T++ LIPK + P     FRPISLCNV YKIISK++ANRLK ++
Sbjct: 500 TNICLIPKVERPEQACQFRPISLCNVIYKIISKIIANRLKPIL 542


>ref|XP_003604260.1| CNGC5-like protein [Medicago truncatula]
           gi|355505315|gb|AES86457.1| CNGC5-like protein [Medicago
           truncatula]
          Length = 1023

 Score =  114 bits (285), Expect = 8e-24
 Identities = 53/100 (53%), Positives = 70/100 (70%)
 Frame = -2

Query: 316 PVTKEEVRLAVFDFPSGKSPGPDGFTAEFYKFFWSDIGDSLFDVVDHFFSTSNMHSAWGR 137
           P+TKEE+RLA+F     KSPGPDGF A F++ FWS  GD +F+    +       S+   
Sbjct: 32  PITKEELRLALFQMHPDKSPGPDGFNATFFQRFWSLCGDEIFEATKCWMDRGFFPSSLNE 91

Query: 136 TSVALIPKTDNPSSVRDFRPISLCNVSYKIISKVLANRLK 17
           T++ LIPK D+P S++D RPISLCNV YK++SK+LANRLK
Sbjct: 92  TNICLIPKCDSPKSMKDMRPISLCNVLYKMLSKLLANRLK 131


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 1223

 Score =  112 bits (280), Expect = 3e-23
 Identities = 53/105 (50%), Positives = 69/105 (65%)
 Frame = -2

Query: 316 PVTKEEVRLAVFDFPSGKSPGPDGFTAEFYKFFWSDIGDSLFDVVDHFFSTSNMHSAWGR 137
           PVT EE+R  +F  PS KSPGPDG+T+EF+K  W  IGD     V  FF+   +      
Sbjct: 452 PVTAEEIRKVLFRMPSDKSPGPDGYTSEFFKATWEIIGDEFTLAVQSFFTKGFLPKGINS 511

Query: 136 TSVALIPKTDNPSSVRDFRPISLCNVSYKIISKVLANRLKTVIPR 2
           T +ALIPK      ++D+RPIS CNV YK+ISK++ANRLK V+P+
Sbjct: 512 TILALIPKKTEAREMKDYRPISCCNVLYKVISKIIANRLKLVLPK 556


>gb|ABD64923.1| hypothetical protein 24.t00067 [Brassica oleracea]
          Length = 381

 Score =  111 bits (278), Expect = 5e-23
 Identities = 49/102 (48%), Positives = 74/102 (72%)
 Frame = -2

Query: 313 VTKEEVRLAVFDFPSGKSPGPDGFTAEFYKFFWSDIGDSLFDVVDHFFSTSNMHSAWGRT 134
           VT EEVR++VF   + ++PGPDG TA FY+ +W  +G ++ + V HFF+T   +S    T
Sbjct: 230 VTAEEVRISVFSIGATRAPGPDGLTASFYQTYWDIVGPAVVEEVRHFFNTGEFYSDLNHT 289

Query: 133 SVALIPKTDNPSSVRDFRPISLCNVSYKIISKVLANRLKTVI 8
           ++ LIPK  NP +++DFRPI+LCNV YKIISK+L+  +K+++
Sbjct: 290 NLCLIPKITNPITMKDFRPIALCNVMYKIISKILSLCMKSIL 331


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1216

 Score =  110 bits (275), Expect = 1e-22
 Identities = 50/104 (48%), Positives = 67/104 (64%)
 Frame = -2

Query: 313 VTKEEVRLAVFDFPSGKSPGPDGFTAEFYKFFWSDIGDSLFDVVDHFFSTSNMHSAWGRT 134
           VT EE++  +F  P  KSPGPDG+T+EFYK  W  IGD +   +  FF+   +      T
Sbjct: 174 VTGEEIKKVIFSMPKDKSPGPDGYTSEFYKASWEIIGDEVIIAIQSFFAKGFLPKGVNST 233

Query: 133 SVALIPKTDNPSSVRDFRPISLCNVSYKIISKVLANRLKTVIPR 2
            +ALIPK      ++D+RPIS CNV YK ISK+LANRLK ++P+
Sbjct: 234 ILALIPKKKEAREIKDYRPISCCNVLYKAISKILANRLKRILPK 277


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