BLASTX nr result

ID: Dioscorea21_contig00035113 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00035113
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF78420.1|AC009273_26 T1N6.6 [Arabidopsis thaliana]                68   7e-10
ref|NP_171675.3| putative recombination initiation defects 3 [Ar...    68   7e-10
dbj|BAE98373.1| hypothetical protein [Arabidopsis thaliana]            68   7e-10
ref|XP_002892049.1| predicted protein [Arabidopsis lyrata subsp....    68   9e-10
ref|XP_002511864.1| conserved hypothetical protein [Ricinus comm...    66   3e-09

>gb|AAF78420.1|AC009273_26 T1N6.6 [Arabidopsis thaliana]
          Length = 832

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 32/86 (37%), Positives = 59/86 (68%)
 Frame = -3

Query: 268 EVIRQKISLVENSMQKMLRAEEDIKDFLEGRLKAIPVQMDKESDRCKLDEILSSLSALPQ 89
           E I+QK++L + S+Q++ + + D K  L+G +K I  +  K+ ++ KL +IL  L+ +P+
Sbjct: 169 ERIQQKLTLQDTSLQQLRKEQADSKASLDGGVKFILEEFSKDPNQEKLQKILQMLTTIPE 228

Query: 88  QIQTNLFKLQHEICNVFSKETEVIVS 11
           Q++T L K+Q EIC+ F++E +V+ S
Sbjct: 229 QVETALQKIQREICHTFTREIQVLAS 254


>ref|NP_171675.3| putative recombination initiation defects 3 [Arabidopsis thaliana]
           gi|332189201|gb|AEE27322.1| putative recombination
           initiation defects 3 [Arabidopsis thaliana]
          Length = 449

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 32/86 (37%), Positives = 59/86 (68%)
 Frame = -3

Query: 268 EVIRQKISLVENSMQKMLRAEEDIKDFLEGRLKAIPVQMDKESDRCKLDEILSSLSALPQ 89
           E I+QK++L + S+Q++ + + D K  L+G +K I  +  K+ ++ KL +IL  L+ +P+
Sbjct: 171 ERIQQKLTLQDTSLQQLRKEQADSKASLDGGVKFILEEFSKDPNQEKLQKILQMLTTIPE 230

Query: 88  QIQTNLFKLQHEICNVFSKETEVIVS 11
           Q++T L K+Q EIC+ F++E +V+ S
Sbjct: 231 QVETALQKIQREICHTFTREIQVLAS 256


>dbj|BAE98373.1| hypothetical protein [Arabidopsis thaliana]
          Length = 366

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 32/86 (37%), Positives = 59/86 (68%)
 Frame = -3

Query: 268 EVIRQKISLVENSMQKMLRAEEDIKDFLEGRLKAIPVQMDKESDRCKLDEILSSLSALPQ 89
           E I+QK++L + S+Q++ + + D K  L+G +K I  +  K+ ++ KL +IL  L+ +P+
Sbjct: 171 ERIQQKLTLQDTSLQQLRKEQADSKASLDGGVKFILEEFSKDPNQEKLQKILQMLTTIPE 230

Query: 88  QIQTNLFKLQHEICNVFSKETEVIVS 11
           Q++T L K+Q EIC+ F++E +V+ S
Sbjct: 231 QVETALQKIQREICHTFTREIQVLAS 256


>ref|XP_002892049.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297337891|gb|EFH68308.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 855

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 31/86 (36%), Positives = 60/86 (69%)
 Frame = -3

Query: 268 EVIRQKISLVENSMQKMLRAEEDIKDFLEGRLKAIPVQMDKESDRCKLDEILSSLSALPQ 89
           E I+QK+ L + S+Q++++ + D K  L+G +K+I  +  K+ ++ KL +IL  ++ +P+
Sbjct: 170 ERIQQKLILQDTSLQQLIKEQADSKASLDGGVKSILEEFSKDPNQEKLQKILLMVTTIPE 229

Query: 88  QIQTNLFKLQHEICNVFSKETEVIVS 11
           Q++T L K+Q EIC+ F++E +V+ S
Sbjct: 230 QVETALQKIQREICHTFTREIQVLAS 255


>ref|XP_002511864.1| conserved hypothetical protein [Ricinus communis]
           gi|223549044|gb|EEF50533.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 999

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 32/82 (39%), Positives = 55/82 (67%)
 Frame = -3

Query: 268 EVIRQKISLVENSMQKMLRAEEDIKDFLEGRLKAIPVQMDKESDRCKLDEILSSLSALPQ 89
           E IRQK+ +++ S+Q M++ +ED K  L+G LK+I  ++ K+  + +L +I   LSA PQ
Sbjct: 169 EGIRQKLVVLDTSLQLMIKGQEDTKFTLDGSLKSISERLSKDISQDRLQQIFLVLSAFPQ 228

Query: 88  QIQTNLFKLQHEICNVFSKETE 23
           Q++ +L KLQ ++   F+KE +
Sbjct: 229 QMEASLLKLQSDLSMTFTKELQ 250


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