BLASTX nr result

ID: Dioscorea21_contig00035094 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00035094
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003617575.1| DNA mismatch repair protein mutS [Medicago t...    80   2e-13
ref|XP_003545125.1| PREDICTED: mutS protein homolog 5-like [Glyc...    78   8e-13
emb|CBI26657.3| unnamed protein product [Vitis vinifera]               76   2e-12
ref|XP_002317341.1| predicted protein [Populus trichocarpa] gi|2...    75   7e-12
ref|XP_002440016.1| hypothetical protein SORBIDRAFT_09g024520 [S...    70   2e-10

>ref|XP_003617575.1| DNA mismatch repair protein mutS [Medicago truncatula]
           gi|355518910|gb|AET00534.1| DNA mismatch repair protein
           mutS [Medicago truncatula]
          Length = 488

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 51/126 (40%), Positives = 69/126 (54%)
 Frame = -2

Query: 390 LRENLLWLKSMLDLGTVVYVHAGGELLAMLENERLLAIFE*KESGDTYITIEDVNQAYSI 211
           ++E + +L SM+D+G+ V V A G LLA+LENER++   E KESG+T ITI+ + +    
Sbjct: 123 VKERIYFLSSMMDMGSEVQVRASGGLLAILENERIVDTLEQKESGNTSITIDSLAE---- 178

Query: 210 VLLLLYFVCNICCSLYPLFETLHFSHLLIKTNFLGIKLDATVHKALQIFQIGKQPTHMGL 31
                                      +   NF  IKLDA  H+ALQIFQI K P+HMG+
Sbjct: 179 ---------------------------ISLNNF--IKLDAASHEALQIFQIDKHPSHMGI 209

Query: 30  GWA*EG 13
           G A EG
Sbjct: 210 GRAKEG 215


>ref|XP_003545125.1| PREDICTED: mutS protein homolog 5-like [Glycine max]
          Length = 882

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 49/126 (38%), Positives = 68/126 (53%)
 Frame = -2

Query: 390 LRENLLWLKSMLDLGTVVYVHAGGELLAMLENERLLAIFE*KESGDTYITIEDVNQAYSI 211
           ++E + +L SM+++G+ V V A G LLA+LENER++   E KESG+T ITI+ + +    
Sbjct: 121 VKERIYYLSSMMNMGSEVQVRASGGLLAILENERIVDTLEQKESGNTSITIDSLAE---- 176

Query: 210 VLLLLYFVCNICCSLYPLFETLHFSHLLIKTNFLGIKLDATVHKALQIFQIGKQPTHMGL 31
                                      +   NFL  KLD   H+ALQIFQI K P+HMG+
Sbjct: 177 ---------------------------ISLNNFL--KLDTAAHEALQIFQIDKHPSHMGI 207

Query: 30  GWA*EG 13
           G A EG
Sbjct: 208 GRAKEG 213


>emb|CBI26657.3| unnamed protein product [Vitis vinifera]
          Length = 793

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 50/126 (39%), Positives = 68/126 (53%)
 Frame = -2

Query: 390 LRENLLWLKSMLDLGTVVYVHAGGELLAMLENERLLAIFE*KESGDTYITIEDVNQAYSI 211
           ++E + +L SM+D+G+ + V A G LLA+LENER++   E KE G+  ITI+ V +    
Sbjct: 107 IKERICFLSSMMDIGSDIQVRASGGLLAILENERIVDTLEQKECGNASITIDFVTEI--- 163

Query: 210 VLLLLYFVCNICCSLYPLFETLHFSHLLIKTNFLGIKLDATVHKALQIFQIGKQPTHMGL 31
                               +LH         FL  KLDA  H+ALQIFQI K P+HMG+
Sbjct: 164 --------------------SLH--------KFL--KLDAAAHEALQIFQIDKHPSHMGI 193

Query: 30  GWA*EG 13
           G A EG
Sbjct: 194 GRAKEG 199


>ref|XP_002317341.1| predicted protein [Populus trichocarpa] gi|222860406|gb|EEE97953.1|
           predicted protein [Populus trichocarpa]
          Length = 531

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 51/115 (44%), Positives = 69/115 (60%)
 Frame = -2

Query: 357 LDLGTVVYVHAGGELLAMLENERLLAIFE*KESGDTYITIEDVNQAYSIVLLLLYFVCNI 178
           +D+G+ V V A G LLA+LE+ER++   E KE G+  ITI+ + +   I L L  +  N 
Sbjct: 1   MDIGSDVQVRASGGLLAILESERIVDTLEQKEYGNASITIDSIVE---ISLYLFIYKRN- 56

Query: 177 CCSLYPLFETLHFSHLLIKTNFLGIKLDATVHKALQIFQIGKQPTHMGLGWA*EG 13
                 L   L F++  I+  FL  KLDA  H+ALQIFQI K P+HMG+G A EG
Sbjct: 57  ------LENNLSFTYQ-IRNKFL--KLDAAAHEALQIFQIDKHPSHMGIGRAKEG 102


>ref|XP_002440016.1| hypothetical protein SORBIDRAFT_09g024520 [Sorghum bicolor]
           gi|241945301|gb|EES18446.1| hypothetical protein
           SORBIDRAFT_09g024520 [Sorghum bicolor]
          Length = 687

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 50/125 (40%), Positives = 67/125 (53%)
 Frame = -2

Query: 387 RENLLWLKSMLDLGTVVYVHAGGELLAMLENERLLAIFE*KESGDTYITIEDVNQAYSIV 208
           +E + +L SM+DLG+ V V A G LLA+L+NERLL   E  + G +         A   V
Sbjct: 81  KERICFLNSMMDLGSDVQVRAAGGLLAILDNERLLDTIEQMQGGASI--------AIDSV 132

Query: 207 LLLLYFVCNICCSLYPLFETLHFSHLLIKTNFLGIKLDATVHKALQIFQIGKQPTHMGLG 28
           L L                 L ++H   +  FL  KLDAT H+ALQIFQ+ K P++MG+G
Sbjct: 133 LAL---------------NALTYNH---RDKFL--KLDATAHEALQIFQVDKHPSYMGIG 172

Query: 27  WA*EG 13
            A EG
Sbjct: 173 RAKEG 177


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