BLASTX nr result
ID: Dioscorea21_contig00035067
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00035067
(530 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001173281.1| Os03g0169300 [Oryza sativa Japonica Group] g... 145 4e-33
ref|XP_002468435.1| hypothetical protein SORBIDRAFT_01g045890 [S... 145 5e-33
gb|EAY88708.1| hypothetical protein OsI_10183 [Oryza sativa Indi... 144 8e-33
emb|CAN60969.1| hypothetical protein VITISV_033859 [Vitis vinifera] 142 2e-32
ref|XP_002278681.2| PREDICTED: pentatricopeptide repeat-containi... 140 2e-31
>ref|NP_001173281.1| Os03g0169300 [Oryza sativa Japonica Group]
gi|19071631|gb|AAL84298.1|AC073556_15 putative
pentatricopeptide repeat containing protein [Oryza
sativa Japonica Group] gi|108706397|gb|ABF94192.1|
pentatricopeptide, putative [Oryza sativa Japonica
Group] gi|125585070|gb|EAZ25734.1| hypothetical protein
OsJ_09569 [Oryza sativa Japonica Group]
gi|215769145|dbj|BAH01374.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|255674238|dbj|BAH92009.1| Os03g0169300 [Oryza sativa
Japonica Group]
Length = 510
Score = 145 bits (366), Expect = 4e-33
Identities = 86/176 (48%), Positives = 114/176 (64%), Gaps = 10/176 (5%)
Frame = +1
Query: 25 LLSISNACDSMLKLKLIHGRLIRF-DLHPHR----ILAKLFRFAAVSPAGNLRYATLLFS 189
L+S + C + KL+L+HG L+R L P LAKL RFAAVSPAG+LR+A L S
Sbjct: 13 LVSFAGKCSTKRKLRLLHGALLRRRHLLPTADAVAALAKLLRFAAVSPAGDLRHAAALLS 72
Query: 190 YHHCIRSTNTT--AFFYNTLIRGFANSSDPSQSFTLFNSMRRRSISPDPFSFTFILKARS 363
H S+ ++ AFFYNTL+RG A SS P+ + LF++MRR +PD F+FTF LK+ S
Sbjct: 73 LHLPFLSSASSHLAFFYNTLMRGLAASSSPAAAIELFSAMRRAGAAPDAFTFTFALKSCS 132
Query: 364 RCLS--NMAGDVQAQALKFGCLSPHPAHADVHNALIHLY-ALVDPGPAQQVFDEMP 522
RC+S + D+ AQA+K GCL +H VHNAL+H Y + G A++VFDEMP
Sbjct: 133 RCVSQRRLPSDLHAQAIKHGCLGAGSSHVHVHNALLHGYSSRAAVGDARRVFDEMP 188
>ref|XP_002468435.1| hypothetical protein SORBIDRAFT_01g045890 [Sorghum bicolor]
gi|241922289|gb|EER95433.1| hypothetical protein
SORBIDRAFT_01g045890 [Sorghum bicolor]
Length = 506
Score = 145 bits (365), Expect = 5e-33
Identities = 89/178 (50%), Positives = 109/178 (61%), Gaps = 12/178 (6%)
Frame = +1
Query: 25 LLSISNACDSMLKLKLIHGRLIRFD-----LHPHRILAKLFRFAAVSPAGNLRYATLLFS 189
LL+ S C + L+L+H L+R +LAKL RFAAVSPAG+LR+A++L S
Sbjct: 9 LLACSGRCFTKRDLRLLHAALLRRRHILPAADAVAVLAKLLRFAAVSPAGDLRHASVLLS 68
Query: 190 YHHCIRSTNTT--AFFYNTLIRGFANSSDPSQSFTLFNSMRRRSISPDPFSFTFILKARS 363
H S + AFFYNTLIRGFA SS PS LF +MRR +PD F+FTF+LK+ S
Sbjct: 69 LHLPFISAAASHLAFFYNTLIRGFAVSSSPSAGIELFTAMRRAGAAPDAFTFTFVLKSCS 128
Query: 364 RCLS--NMAGDVQAQALKFGCLSPHPAHADVHNALIHLYA---LVDPGPAQQVFDEMP 522
RC S + D+ AQA K GCLS H VHNAL+H YA VD A +VFDEMP
Sbjct: 129 RCHSPGRLPSDLHAQAFKHGCLSARSEHVHVHNALLHAYASRSAVD--DAHRVFDEMP 184
>gb|EAY88708.1| hypothetical protein OsI_10183 [Oryza sativa Indica Group]
Length = 510
Score = 144 bits (363), Expect = 8e-33
Identities = 86/176 (48%), Positives = 113/176 (64%), Gaps = 10/176 (5%)
Frame = +1
Query: 25 LLSISNACDSMLKLKLIHGRLIRF-DLHPHR----ILAKLFRFAAVSPAGNLRYATLLFS 189
L+S + C + KL+L+HG L+R L P LAKL RFAAVSPAG+LR+A L S
Sbjct: 13 LVSFAGKCSTKRKLRLLHGALLRRRHLLPAADAVAALAKLLRFAAVSPAGDLRHAAALLS 72
Query: 190 YHHCIRSTNTT--AFFYNTLIRGFANSSDPSQSFTLFNSMRRRSISPDPFSFTFILKARS 363
H S+ ++ AFFYNTL+RG A SS P+ + LF +MRR +PD F+FTF LK+ S
Sbjct: 73 LHLPFLSSASSHLAFFYNTLMRGLAASSSPAAAIELFAAMRRAGAAPDAFTFTFALKSCS 132
Query: 364 RCLS--NMAGDVQAQALKFGCLSPHPAHADVHNALIHLY-ALVDPGPAQQVFDEMP 522
RC+S + D+ AQA+K GCL +H VHNAL+H Y + G A++VFDEMP
Sbjct: 133 RCVSQRRLPSDLHAQAIKHGCLGAGSSHVHVHNALLHGYSSRAAVGDARRVFDEMP 188
>emb|CAN60969.1| hypothetical protein VITISV_033859 [Vitis vinifera]
Length = 722
Score = 142 bits (359), Expect = 2e-32
Identities = 89/180 (49%), Positives = 108/180 (60%), Gaps = 8/180 (4%)
Frame = +1
Query: 4 MTMTATALLSISNACDSMLKLKLIHGRLIRFDLHPHR-ILAKLFRFAAVSPAGNLRYATL 180
M T+ +L S++ AC +M LKLIH R R +LH H +LAK+FRFAAVSP G L YA
Sbjct: 237 MLPTSQSLASMAEACLAMQALKLIHARAFRANLHNHALVLAKIFRFAAVSPNGCLHYADR 296
Query: 181 LFSYHHCIRSTNTTAFFYNTLIRGFANSSDPSQSFTLFNSMRRRSISPDPFSFTFILKAR 360
LFS H FFYNTLIRG++ SS PSQS LFN MRR + PD F+FTF+LK R
Sbjct: 297 LFSQIH-----QPNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLKGR 351
Query: 361 SRCLSNM-----AGDVQAQALKFG-CLSPHPAHADVHNALIHLYALVD-PGPAQQVFDEM 519
SR ++ + ++ LK G C H V NALIHLYA P A QVF+EM
Sbjct: 352 SRMRIDLPLIVASDEIHGAVLKLGFCF-----HLFVMNALIHLYAARGVPAAAHQVFNEM 406
Score = 124 bits (311), Expect = 9e-27
Identities = 68/122 (55%), Positives = 81/122 (66%), Gaps = 1/122 (0%)
Frame = +1
Query: 4 MTMTATALLSISNACDSMLKLKLIHGRLIRFDLHPHR-ILAKLFRFAAVSPAGNLRYATL 180
M T+ +L S++ AC +M LKLIH R R +LH H +LAK+FRFAAVSP G L YA
Sbjct: 83 MLPTSQSLASMAEACLAMQALKLIHARAFRANLHNHALVLAKIFRFAAVSPNGCLHYADR 142
Query: 181 LFSYHHCIRSTNTTAFFYNTLIRGFANSSDPSQSFTLFNSMRRRSISPDPFSFTFILKAR 360
LFS H FFYNTLIRG++ SS PSQS LFN MRR + PD F+FTF+LK R
Sbjct: 143 LFSQIH-----QPNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLKGR 197
Query: 361 SR 366
SR
Sbjct: 198 SR 199
>ref|XP_002278681.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 663
Score = 140 bits (352), Expect = 2e-31
Identities = 88/180 (48%), Positives = 107/180 (59%), Gaps = 8/180 (4%)
Frame = +1
Query: 4 MTMTATALLSISNACDSMLKLKLIHGRLIRFDLHPHR-ILAKLFRFAAVSPAGNLRYATL 180
M T+ +L S++ AC +M LKLIH R +LH H +LAK+FRFAAVSP G L YA
Sbjct: 178 MLPTSQSLASMAEACLTMQALKLIHALAFRANLHHHALVLAKIFRFAAVSPNGCLHYADR 237
Query: 181 LFSYHHCIRSTNTTAFFYNTLIRGFANSSDPSQSFTLFNSMRRRSISPDPFSFTFILKAR 360
LFS H FFYNTLIRG++ SS PSQS LFN MRR + PD F+FTF+LK R
Sbjct: 238 LFSQIH-----QPNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLKGR 292
Query: 361 SRCLSNM-----AGDVQAQALKFG-CLSPHPAHADVHNALIHLYALVD-PGPAQQVFDEM 519
SR ++ + ++ LK G C H V NALIHLYA P A QVF+EM
Sbjct: 293 SRMRIDLPLIVASDEIHGAVLKLGFCF-----HLFVMNALIHLYAARGVPAAAHQVFNEM 347