BLASTX nr result

ID: Dioscorea21_contig00035019 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00035019
         (471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP73613.1| mutL-like protein 3 [Hordeum vulgare subsp. vulgare]    84   1e-14
ref|XP_004146214.1| PREDICTED: uncharacterized protein LOC101213...    82   3e-14
dbj|BAD33895.1| DNA mismatch repair protein -like [Oryza sativa ...    79   3e-13
gb|EEE70181.1| hypothetical protein OsJ_30259 [Oryza sativa Japo...    79   3e-13
gb|EEC85019.1| hypothetical protein OsI_32312 [Oryza sativa Indi...    79   3e-13

>gb|AFP73613.1| mutL-like protein 3 [Hordeum vulgare subsp. vulgare]
          Length = 1208

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 45/104 (43%), Positives = 64/104 (61%), Gaps = 1/104 (0%)
 Frame = -2

Query: 470 PAYILNIFCPISMYDLTFEPSKTILEFKDWTVVLSVLKQAIWQFWEKLLAQQSQGKSFGS 291
           PA++LN FCP S YDL FEPSKTI+EFKDW  +L   +Q I  +W+K L Q S+GK    
Sbjct: 306 PAFLLNFFCPRSSYDLHFEPSKTIVEFKDWQSILFFFEQTITNYWKKHLPQSSKGKVI-D 364

Query: 290 NDAVPIESEIQ-NKVASKSCTIRKRKDVVQSPQSSSHPTAKSSV 162
           +  VP++S+++ N+   K   ++ ++D     Q   H   KSSV
Sbjct: 365 DTCVPLKSDVKLNRAFVKHQNVQNKEDDADLQQ---HTPRKSSV 405


>ref|XP_004146214.1| PREDICTED: uncharacterized protein LOC101213777 [Cucumis sativus]
          Length = 1238

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 54/131 (41%), Positives = 79/131 (60%), Gaps = 4/131 (3%)
 Frame = -2

Query: 470 PAYILNIFCPISMYDLTFEPSKTILEFKDWTVVLSVLKQAIWQFWEKLLAQQSQGKS-FG 294
           PAY+LN+ CP+S YDLTFE SKTI++FKDWT +L+ +++AI QFW++   + + GKS   
Sbjct: 320 PAYVLNLECPVSFYDLTFESSKTIVQFKDWTPILTFVEEAIQQFWKE---KYNCGKSAVH 376

Query: 293 SNDAVPIES--EIQNKVASKSCTIRK-RKDVVQSPQSSSHPTAKSSVDFKKHRLAGTVKR 123
           S   V  ES  +  N +++KS  I   +K  +QS Q+S   +   SV F KH     +  
Sbjct: 377 STPIVGDESWKDEDNTISTKSNDILSVKKSRMQSCQASLIDSFSPSVTFTKH--DDILSY 434

Query: 122 SLPELKPCRSN 90
            L + K C S+
Sbjct: 435 KLCDKKACESS 445


>dbj|BAD33895.1| DNA mismatch repair protein -like [Oryza sativa Japonica Group]
          Length = 1249

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 37/106 (34%), Positives = 66/106 (62%), Gaps = 1/106 (0%)
 Frame = -2

Query: 470 PAYILNIFCPISMYDLTFEPSKTILEFKDWTVVLSVLKQAIWQFWEKLLAQQSQGKSFGS 291
           PAY+LN+ CP S YDL FEPS+TI+EFKDW  V+   ++ I  +W+K   Q  + K+ G+
Sbjct: 370 PAYLLNLCCPRSSYDLHFEPSQTIVEFKDWQTVMYFFERTITDYWKKHAPQLPEVKAIGN 429

Query: 290 NDAVPIESEIQ-NKVASKSCTIRKRKDVVQSPQSSSHPTAKSSVDF 156
           +  VP+E +++ ++   +   ++K++DV +  Q++        ++F
Sbjct: 430 DTCVPLERDVKSSQELLRRHGVQKKEDVAELYQTALQKNTVRDMNF 475


>gb|EEE70181.1| hypothetical protein OsJ_30259 [Oryza sativa Japonica Group]
          Length = 1166

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 37/106 (34%), Positives = 66/106 (62%), Gaps = 1/106 (0%)
 Frame = -2

Query: 470 PAYILNIFCPISMYDLTFEPSKTILEFKDWTVVLSVLKQAIWQFWEKLLAQQSQGKSFGS 291
           PAY+LN+ CP S YDL FEPS+TI+EFKDW  V+   ++ I  +W+K   Q  + K+ G+
Sbjct: 269 PAYLLNLCCPRSSYDLHFEPSQTIVEFKDWQTVMYFFERTITDYWKKHAPQLPEVKAIGN 328

Query: 290 NDAVPIESEIQ-NKVASKSCTIRKRKDVVQSPQSSSHPTAKSSVDF 156
           +  VP+E +++ ++   +   ++K++DV +  Q++        ++F
Sbjct: 329 DTCVPLERDVKSSQELLRRHGVQKKEDVAELYQTALQKNTVRDMNF 374


>gb|EEC85019.1| hypothetical protein OsI_32312 [Oryza sativa Indica Group]
          Length = 1167

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 37/106 (34%), Positives = 66/106 (62%), Gaps = 1/106 (0%)
 Frame = -2

Query: 470 PAYILNIFCPISMYDLTFEPSKTILEFKDWTVVLSVLKQAIWQFWEKLLAQQSQGKSFGS 291
           PAY+LN+ CP S YDL FEPS+TI+EFKDW  V+   ++ I  +W+K   Q  + K+ G+
Sbjct: 269 PAYLLNLCCPRSSYDLHFEPSQTIVEFKDWQTVMYFFERTITDYWKKHAPQLPEVKAIGN 328

Query: 290 NDAVPIESEIQ-NKVASKSCTIRKRKDVVQSPQSSSHPTAKSSVDF 156
           +  VP+E +++ ++   +   ++K++DV +  Q++        ++F
Sbjct: 329 DTCVPLERDVKSSQELLRRHGVQKKEDVAELYQTALQKNTVRDMNF 374


Top