BLASTX nr result
ID: Dioscorea21_contig00034749
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00034749
(221 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAD30981.1| putative fertility restorer homologue [Oryza sat... 81 1e-13
gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonic... 81 1e-13
gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indi... 80 2e-13
ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containi... 75 6e-12
gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japo... 73 3e-11
>dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer
homologue [Oryza sativa Japonica Group]
Length = 918
Score = 80.9 bits (198), Expect = 1e-13
Identities = 42/71 (59%), Positives = 49/71 (69%)
Frame = -1
Query: 218 NVQSYTALISGSCSSDLLRLAIGLFQRMALDALVPNAVTYNALINGLCQKMMIDTAMKVF 39
NV +YTALISG C S LL++AIGLF RM+ D + PN VTYNALIN L + I A V
Sbjct: 354 NVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVL 413
Query: 38 YLMERRGCSPD 6
LM R GCSP+
Sbjct: 414 NLMGRNGCSPN 424
Score = 65.1 bits (157), Expect = 6e-09
Identities = 32/68 (47%), Positives = 39/68 (57%)
Frame = -1
Query: 209 SYTALISGSCSSDLLRLAIGLFQRMALDALVPNAVTYNALINGLCQKMMIDTAMKVFYLM 30
SYT LI G C + A GLF M D L PN VTY ALI+G C+ +DTA + M
Sbjct: 497 SYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHM 556
Query: 29 ERRGCSPD 6
+R GC P+
Sbjct: 557 KRSGCRPN 564
Score = 55.8 bits (133), Expect = 4e-06
Identities = 27/71 (38%), Positives = 42/71 (59%)
Frame = -1
Query: 218 NVQSYTALISGSCSSDLLRLAIGLFQRMALDALVPNAVTYNALINGLCQKMMIDTAMKVF 39
NV +YTA+I G C + LA+ +F +M +PN +TY++LI L Q+ ++ A +F
Sbjct: 599 NVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLF 658
Query: 38 YLMERRGCSPD 6
+ER G PD
Sbjct: 659 AELERHGLIPD 669
>gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer
[Oryza sativa Japonica Group]
Length = 1007
Score = 80.9 bits (198), Expect = 1e-13
Identities = 42/71 (59%), Positives = 49/71 (69%)
Frame = -1
Query: 218 NVQSYTALISGSCSSDLLRLAIGLFQRMALDALVPNAVTYNALINGLCQKMMIDTAMKVF 39
NV +YTALISG C S LL++AIGLF RM+ D + PN VTYNALIN L + I A V
Sbjct: 354 NVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVL 413
Query: 38 YLMERRGCSPD 6
LM R GCSP+
Sbjct: 414 NLMGRNGCSPN 424
Score = 65.1 bits (157), Expect = 6e-09
Identities = 32/68 (47%), Positives = 39/68 (57%)
Frame = -1
Query: 209 SYTALISGSCSSDLLRLAIGLFQRMALDALVPNAVTYNALINGLCQKMMIDTAMKVFYLM 30
SYT LI G C + A GLF M D L PN VTY ALI+G C+ +DTA + M
Sbjct: 497 SYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHM 556
Query: 29 ERRGCSPD 6
+R GC P+
Sbjct: 557 KRSGCRPN 564
Score = 55.8 bits (133), Expect = 4e-06
Identities = 27/71 (38%), Positives = 42/71 (59%)
Frame = -1
Query: 218 NVQSYTALISGSCSSDLLRLAIGLFQRMALDALVPNAVTYNALINGLCQKMMIDTAMKVF 39
NV +YTA+I G C + LA+ +F +M +PN +TY++LI L Q+ ++ A +F
Sbjct: 599 NVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLF 658
Query: 38 YLMERRGCSPD 6
+ER G PD
Sbjct: 659 AELERHGLIPD 669
>gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer
homologue [Oryza sativa Indica Group]
Length = 918
Score = 80.1 bits (196), Expect = 2e-13
Identities = 41/71 (57%), Positives = 49/71 (69%)
Frame = -1
Query: 218 NVQSYTALISGSCSSDLLRLAIGLFQRMALDALVPNAVTYNALINGLCQKMMIDTAMKVF 39
NV +YTALISG C S +L++AIGLF RM+ D + PN VTYNALIN L + I A V
Sbjct: 354 NVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVL 413
Query: 38 YLMERRGCSPD 6
LM R GCSP+
Sbjct: 414 NLMGRNGCSPN 424
Score = 65.1 bits (157), Expect = 6e-09
Identities = 32/68 (47%), Positives = 39/68 (57%)
Frame = -1
Query: 209 SYTALISGSCSSDLLRLAIGLFQRMALDALVPNAVTYNALINGLCQKMMIDTAMKVFYLM 30
SYT LI G C + A GLF M D L PN VTY ALI+G C+ +DTA + M
Sbjct: 497 SYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHM 556
Query: 29 ERRGCSPD 6
+R GC P+
Sbjct: 557 KRSGCRPN 564
Score = 55.8 bits (133), Expect = 4e-06
Identities = 27/71 (38%), Positives = 42/71 (59%)
Frame = -1
Query: 218 NVQSYTALISGSCSSDLLRLAIGLFQRMALDALVPNAVTYNALINGLCQKMMIDTAMKVF 39
NV +YTA+I G C + LA+ +F +M +PN +TY++LI L Q+ ++ A +F
Sbjct: 599 NVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLF 658
Query: 38 YLMERRGCSPD 6
+ER G PD
Sbjct: 659 AELERHGLIPD 669
>ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 75.1 bits (183), Expect = 6e-12
Identities = 39/72 (54%), Positives = 52/72 (72%)
Frame = -1
Query: 218 NVQSYTALISGSCSSDLLRLAIGLFQRMALDALVPNAVTYNALINGLCQKMMIDTAMKVF 39
NV +YT+LISG S R+AIGLF RM+ D +VPN VTYNAL+N L + M ID+A+ VF
Sbjct: 367 NVYTYTSLISGQRVS---RMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVF 423
Query: 38 YLMERRGCSPDS 3
+M + GC P++
Sbjct: 424 NMMGKHGCLPNT 435
Score = 63.2 bits (152), Expect = 2e-08
Identities = 31/68 (45%), Positives = 40/68 (58%)
Frame = -1
Query: 209 SYTALISGSCSSDLLRLAIGLFQRMALDALVPNAVTYNALINGLCQKMMIDTAMKVFYLM 30
SYT LISG C + LA G+F M L PN VTY ALI+G C+ +D A ++ M
Sbjct: 507 SYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERM 566
Query: 29 ERRGCSPD 6
+R GC P+
Sbjct: 567 KRSGCRPN 574
>gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 72.8 bits (177), Expect = 3e-11
Identities = 39/67 (58%), Positives = 45/67 (67%)
Frame = -1
Query: 218 NVQSYTALISGSCSSDLLRLAIGLFQRMALDALVPNAVTYNALINGLCQKMMIDTAMKVF 39
NV +YTALISG C S LL++AIGLF RM+ D + PN VTYNALIN L + I A V
Sbjct: 524 NVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVL 583
Query: 38 YLMERRG 18
LM R G
Sbjct: 584 NLMGRNG 590
Score = 65.1 bits (157), Expect = 6e-09
Identities = 32/68 (47%), Positives = 39/68 (57%)
Frame = -1
Query: 209 SYTALISGSCSSDLLRLAIGLFQRMALDALVPNAVTYNALINGLCQKMMIDTAMKVFYLM 30
SYT LI G C + A GLF M D L PN VTY ALI+G C+ +DTA + M
Sbjct: 667 SYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHM 726
Query: 29 ERRGCSPD 6
+R GC P+
Sbjct: 727 KRSGCRPN 734
Score = 55.8 bits (133), Expect = 4e-06
Identities = 27/71 (38%), Positives = 42/71 (59%)
Frame = -1
Query: 218 NVQSYTALISGSCSSDLLRLAIGLFQRMALDALVPNAVTYNALINGLCQKMMIDTAMKVF 39
NV +YTA+I G C + LA+ +F +M +PN +TY++LI L Q+ ++ A +F
Sbjct: 769 NVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLF 828
Query: 38 YLMERRGCSPD 6
+ER G PD
Sbjct: 829 AELERHGLIPD 839