BLASTX nr result

ID: Dioscorea21_contig00034705 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034705
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB78007.1| putative protein [Arabidopsis thaliana] gi|73210...    86   3e-15
emb|CAN60544.1| hypothetical protein VITISV_006250 [Vitis vinifera]    84   1e-14
emb|CCA65996.1| hypothetical protein [Beta vulgaris subsp. vulga...    81   8e-14
gb|AAD37019.2| putative non-LTR retrolelement reverse transcript...    80   1e-13
dbj|BAE79383.1| unnamed protein product [Ipomoea batatas]              77   1e-12

>emb|CAB78007.1| putative protein [Arabidopsis thaliana] gi|7321071|emb|CAB82118.1|
           putative protein [Arabidopsis thaliana]
          Length = 404

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 44/101 (43%), Positives = 62/101 (61%)
 Frame = +2

Query: 8   GPWTVEGLTLQLFPWSPCFEPAHSKLSRAAVWIQLHNLPVDYWDGESLKAITESLGRLLK 187
           GPW V G  L +  WSP F+P    +    VW++L N+PV+Y+    L+ I   LG+LLK
Sbjct: 83  GPWRVFGNYLMVQDWSPNFDPLRDDIVTTPVWVRLTNIPVNYYHRCLLEEIARGLGKLLK 142

Query: 188 VDEHTETLSRTSFARLCLEIDLSKPLKRGFWLEDDGKRVFV 310
           VD +T T  R  FAR+C+E++L+KPLK    +  +G R FV
Sbjct: 143 VDLNTITFGRGRFARVCIEVNLAKPLKGTVLI--NGDRYFV 181


>emb|CAN60544.1| hypothetical protein VITISV_006250 [Vitis vinifera]
          Length = 833

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 37/89 (41%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
 Frame = +2

Query: 2   FRG-PWTVEGLTLQLFPWSPCFEPAHSKLSRAAVWIQLHNLPVDYWDGESLKAITESLGR 178
           F+G PW + G  + L PW P F+P+ + ++ A VW++L  LP++Y+D E L  I  ++GR
Sbjct: 156 FKGVPWLIHGYYISLRPWVPNFKPSEATITHAKVWVRLPELPIEYYDKEVLLQIGAAIGR 215

Query: 179 LLKVDEHTETLSRTSFARLCLEIDLSKPL 265
            +K+D  TE  +R  FAR+C+E+DL   L
Sbjct: 216 TIKIDPITEKQARGRFARMCVEVDLKHSL 244


>emb|CCA65996.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 744

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 37/94 (39%), Positives = 57/94 (60%)
 Frame = +2

Query: 2   FRGPWTVEGLTLQLFPWSPCFEPAHSKLSRAAVWIQLHNLPVDYWDGESLKAITESLGRL 181
           F GPW +    L L  W P F P+ S   +  VWI+   LP++Y+D E+L AI   +G+ 
Sbjct: 179 FGGPWFILNHYLMLTRWKPDFRPSQSVFDKIMVWIRFPELPLEYYDKEALFAIAGKVGKP 238

Query: 182 LKVDEHTETLSRTSFARLCLEIDLSKPLKRGFWL 283
           +KVD  T+ ++R  +AR+C+E+DL+K L    W+
Sbjct: 239 IKVDYATDHMARGRYARVCIELDLAKALVSKVWV 272


>gb|AAD37019.2| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 855

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 40/101 (39%), Positives = 60/101 (59%)
 Frame = +2

Query: 8   GPWTVEGLTLQLFPWSPCFEPAHSKLSRAAVWIQLHNLPVDYWDGESLKAITESLGRLLK 187
           GPW   G  L +  WSP F+P   +++   +W++L N+P+  +    L  I  SLG+ +K
Sbjct: 111 GPWRAFGSYLLVQAWSPEFDPLRDEITTTPIWVRLMNIPLSLYHTSILMGIAGSLGKPVK 170

Query: 188 VDEHTETLSRTSFARLCLEIDLSKPLKRGFWLEDDGKRVFV 310
           VD  T  + R  FAR+C+E+DL+KPLK    L  +G+R FV
Sbjct: 171 VDMTTLHVERARFARMCIEVDLAKPLKGTLLL--NGERYFV 209


>dbj|BAE79383.1| unnamed protein product [Ipomoea batatas]
          Length = 532

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 37/99 (37%), Positives = 58/99 (58%)
 Frame = +2

Query: 8   GPWTVEGLTLQLFPWSPCFEPAHSKLSRAAVWIQLHNLPVDYWDGESLKAITESLGRLLK 187
           GPW +    L    W P FEP  +K  + AVW++L  L ++Y+  +++KAI E++G+ L+
Sbjct: 159 GPWKIFDNYLITQRWVPNFEPRTAKFQKMAVWVRLPELSMEYFRDDTIKAILENIGKPLR 218

Query: 188 VDEHTETLSRTSFARLCLEIDLSKPLKRGFWLEDDGKRV 304
           +D  T    +  FAR  +EIDL KPL    W+  D ++V
Sbjct: 219 LDRTTMAREKGRFARAAVEIDLGKPLVSEIWVMGDVQKV 257


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