BLASTX nr result

ID: Dioscorea21_contig00033967 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00033967
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD26413.1| putative SKP1 [Oryza sativa Japonica Group] gi|4...    86   3e-15
gb|EAZ08393.1| hypothetical protein OsI_30653 [Oryza sativa Indi...    86   3e-15
dbj|BAC19974.1| putative Skp1 [Oryza sativa Japonica Group] gi|5...    86   3e-15
ref|XP_003621661.1| SKP1-like protein [Medicago truncatula] gi|3...    86   4e-15
gb|AAT12490.1| Skp1/Ask1-like protein [Zantedeschia hybrid culti...    85   7e-15

>dbj|BAD26413.1| putative SKP1 [Oryza sativa Japonica Group]
           gi|49388748|dbj|BAD25948.1| putative SKP1 [Oryza sativa
           Japonica Group] gi|125604974|gb|EAZ44010.1| hypothetical
           protein OsJ_28634 [Oryza sativa Japonica Group]
          Length = 165

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 42/72 (58%), Positives = 54/72 (75%)
 Frame = -3

Query: 235 FVKVDNTDDLYDLIIASDFLRINSLMNLCCSKVAKLIEGKTASEIRDMFGIKYDFTEEEE 56
           F+ VDNT  L++LI+A+++L + SL++L C   A LI+GKT  EIRDMFGI  DFT EEE
Sbjct: 94  FIDVDNTM-LFNLILAANYLNVPSLLDLACQHTADLIKGKTVQEIRDMFGIVNDFTPEEE 152

Query: 55  EAIRKENMWVFD 20
           E IRKEN W F+
Sbjct: 153 EEIRKENEWAFE 164


>gb|EAZ08393.1| hypothetical protein OsI_30653 [Oryza sativa Indica Group]
          Length = 165

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 42/72 (58%), Positives = 54/72 (75%)
 Frame = -3

Query: 235 FVKVDNTDDLYDLIIASDFLRINSLMNLCCSKVAKLIEGKTASEIRDMFGIKYDFTEEEE 56
           F+ VDNT  L++LI+A+++L + SL++L C   A LI+GKT  EIRDMFGI  DFT EEE
Sbjct: 94  FIDVDNTM-LFNLILAANYLNVPSLLDLACQHTADLIKGKTVQEIRDMFGIVNDFTPEEE 152

Query: 55  EAIRKENMWVFD 20
           E IRKEN W F+
Sbjct: 153 EEIRKENEWAFE 164


>dbj|BAC19974.1| putative Skp1 [Oryza sativa Japonica Group]
           gi|50509630|dbj|BAD31474.1| putative Skp1 [Oryza sativa
           Japonica Group] gi|125557224|gb|EAZ02760.1| hypothetical
           protein OsI_24880 [Oryza sativa Indica Group]
           gi|125599105|gb|EAZ38681.1| hypothetical protein
           OsJ_23075 [Oryza sativa Japonica Group]
          Length = 164

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 41/72 (56%), Positives = 53/72 (73%)
 Frame = -3

Query: 235 FVKVDNTDDLYDLIIASDFLRINSLMNLCCSKVAKLIEGKTASEIRDMFGIKYDFTEEEE 56
           F+ VD  + LYDL++AS+F+ I SL++LCC   A LI+GK+  +IR  FGIK DFT EEE
Sbjct: 94  FIDVDK-NMLYDLLLASNFMNIKSLLDLCCQHTANLIKGKSPEQIRKEFGIKNDFTPEEE 152

Query: 55  EAIRKENMWVFD 20
           E IRKEN W F+
Sbjct: 153 EEIRKENTWAFE 164


>ref|XP_003621661.1| SKP1-like protein [Medicago truncatula] gi|355496676|gb|AES77879.1|
           SKP1-like protein [Medicago truncatula]
          Length = 156

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 41/72 (56%), Positives = 53/72 (73%)
 Frame = -3

Query: 235 FVKVDNTDDLYDLIIASDFLRINSLMNLCCSKVAKLIEGKTASEIRDMFGIKYDFTEEEE 56
           FVKVD  D L+DLI+A+++L I SL++L C  VA +I+GKT  EIR  F IK DFT EEE
Sbjct: 86  FVKVDQ-DTLFDLILAANYLNIKSLLDLTCQSVADMIKGKTPEEIRKTFNIKNDFTPEEE 144

Query: 55  EAIRKENMWVFD 20
           E +R+EN W F+
Sbjct: 145 EEVRRENQWAFE 156


>gb|AAT12490.1| Skp1/Ask1-like protein [Zantedeschia hybrid cultivar]
          Length = 167

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 41/72 (56%), Positives = 53/72 (73%)
 Frame = -3

Query: 235 FVKVDNTDDLYDLIIASDFLRINSLMNLCCSKVAKLIEGKTASEIRDMFGIKYDFTEEEE 56
           FVKVD T  L+DLI+A+++L I SL++L C  VA +I+GKT  EIR  F IK DFT EEE
Sbjct: 97  FVKVDQTT-LFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEE 155

Query: 55  EAIRKENMWVFD 20
           E +R+EN W F+
Sbjct: 156 EEVRRENQWAFE 167


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