BLASTX nr result

ID: Dioscorea21_contig00033964 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00033964
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ95139.1| predicted protein [Hordeum vulgare subsp. vulgar...    83   2e-17
ref|NP_001058575.1| Os06g0714500 [Oryza sativa Japonica Group] g...    80   8e-17
gb|ACR38449.1| unknown [Zea mays] gi|413943136|gb|AFW75785.1| hy...    80   8e-17
ref|NP_200166.1| P-loop containing nucleoside triphosphate hydro...    80   1e-16
ref|XP_002865978.1| hypothetical protein ARALYDRAFT_495431 [Arab...    80   1e-16

>dbj|BAJ95139.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326507238|dbj|BAJ95696.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 394

 Score = 82.8 bits (203), Expect(2) = 2e-17
 Identities = 45/63 (71%), Positives = 48/63 (76%), Gaps = 6/63 (9%)
 Frame = -2

Query: 330 ISLWFS-----VSAIFSLANKLQPAIIFIDEVDSFLGQRAG-DSGYYNSMKTEFMSLWDG 169
           +S WF      VSA+FSLANKLQPAIIFIDEVDSFLGQR   D     +MKTEFMSLWDG
Sbjct: 157 MSKWFGDAQKLVSAVFSLANKLQPAIIFIDEVDSFLGQRRNTDHEALTNMKTEFMSLWDG 216

Query: 168 FTT 160
           FTT
Sbjct: 217 FTT 219



 Score = 31.2 bits (69), Expect(2) = 2e-17
 Identities = 13/17 (76%), Positives = 17/17 (100%)
 Frame = -3

Query: 53  ENSRVLVLAATNRPTEL 3
           +N+RV+VLAATNRP+EL
Sbjct: 221 QNARVMVLAATNRPSEL 237


>ref|NP_001058575.1| Os06g0714500 [Oryza sativa Japonica Group]
           gi|53791771|dbj|BAD53565.1| putative spastin protein
           [Oryza sativa Japonica Group]
           gi|113596615|dbj|BAF20489.1| Os06g0714500 [Oryza sativa
           Japonica Group] gi|125556743|gb|EAZ02349.1| hypothetical
           protein OsI_24453 [Oryza sativa Indica Group]
           gi|125598493|gb|EAZ38273.1| hypothetical protein
           OsJ_22651 [Oryza sativa Japonica Group]
           gi|215712288|dbj|BAG94415.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 393

 Score = 80.5 bits (197), Expect(2) = 8e-17
 Identities = 44/63 (69%), Positives = 48/63 (76%), Gaps = 6/63 (9%)
 Frame = -2

Query: 330 ISLWFS-----VSAIFSLANKLQPAIIFIDEVDSFLGQ-RAGDSGYYNSMKTEFMSLWDG 169
           +S WF      VSA+FSLA+KLQPAIIFIDEVDSFLGQ R  D     +MKTEFMSLWDG
Sbjct: 156 MSKWFGDAQKLVSAVFSLAHKLQPAIIFIDEVDSFLGQRRTTDHEAMTNMKTEFMSLWDG 215

Query: 168 FTT 160
           FTT
Sbjct: 216 FTT 218



 Score = 31.2 bits (69), Expect(2) = 8e-17
 Identities = 13/17 (76%), Positives = 17/17 (100%)
 Frame = -3

Query: 53  ENSRVLVLAATNRPTEL 3
           +N+RV+VLAATNRP+EL
Sbjct: 220 QNARVMVLAATNRPSEL 236


>gb|ACR38449.1| unknown [Zea mays] gi|413943136|gb|AFW75785.1| hypothetical protein
           ZEAMMB73_688286 [Zea mays]
          Length = 391

 Score = 80.5 bits (197), Expect(2) = 8e-17
 Identities = 44/63 (69%), Positives = 48/63 (76%), Gaps = 6/63 (9%)
 Frame = -2

Query: 330 ISLWFS-----VSAIFSLANKLQPAIIFIDEVDSFLGQ-RAGDSGYYNSMKTEFMSLWDG 169
           +S WF      VSA+FSLA+KLQPAIIFIDEVDSFLGQ R  D     +MKTEFMSLWDG
Sbjct: 157 MSKWFGDAQKLVSAVFSLAHKLQPAIIFIDEVDSFLGQRRTTDHEAMTNMKTEFMSLWDG 216

Query: 168 FTT 160
           FTT
Sbjct: 217 FTT 219



 Score = 31.2 bits (69), Expect(2) = 8e-17
 Identities = 13/17 (76%), Positives = 17/17 (100%)
 Frame = -3

Query: 53  ENSRVLVLAATNRPTEL 3
           +N+RV+VLAATNRP+EL
Sbjct: 221 QNARVMVLAATNRPSEL 237


>ref|NP_200166.1| P-loop containing nucleoside triphosphate hydrolase-like protein
           [Arabidopsis thaliana] gi|9759193|dbj|BAB09730.1| 26S
           proteasome regulatory particle chain RPT6-like protein
           [Arabidopsis thaliana] gi|16604478|gb|AAL24245.1|
           AT5g53540/MNC6_8 [Arabidopsis thaliana]
           gi|27363282|gb|AAO11560.1| At5g53540/MNC6_8 [Arabidopsis
           thaliana] gi|332008991|gb|AED96374.1| P-loop containing
           nucleoside triphosphate hydrolase-like protein
           [Arabidopsis thaliana]
          Length = 403

 Score = 79.7 bits (195), Expect(2) = 1e-16
 Identities = 43/63 (68%), Positives = 50/63 (79%), Gaps = 6/63 (9%)
 Frame = -2

Query: 330 ISLWFS-----VSAIFSLANKLQPAIIFIDEVDSFLGQ-RAGDSGYYNSMKTEFMSLWDG 169
           +S WF      VSA+FSLA KLQPAIIFIDEVDSFLGQ R+ D+   ++MKTEFM+LWDG
Sbjct: 159 MSKWFGDAQKLVSAVFSLAYKLQPAIIFIDEVDSFLGQRRSTDNEAMSNMKTEFMALWDG 218

Query: 168 FTT 160
           FTT
Sbjct: 219 FTT 221



 Score = 31.2 bits (69), Expect(2) = 1e-16
 Identities = 13/17 (76%), Positives = 17/17 (100%)
 Frame = -3

Query: 53  ENSRVLVLAATNRPTEL 3
           +N+RV+VLAATNRP+EL
Sbjct: 223 QNARVMVLAATNRPSEL 239


>ref|XP_002865978.1| hypothetical protein ARALYDRAFT_495431 [Arabidopsis lyrata subsp.
           lyrata] gi|297311813|gb|EFH42237.1| hypothetical protein
           ARALYDRAFT_495431 [Arabidopsis lyrata subsp. lyrata]
          Length = 402

 Score = 79.7 bits (195), Expect(2) = 1e-16
 Identities = 43/63 (68%), Positives = 50/63 (79%), Gaps = 6/63 (9%)
 Frame = -2

Query: 330 ISLWFS-----VSAIFSLANKLQPAIIFIDEVDSFLGQ-RAGDSGYYNSMKTEFMSLWDG 169
           +S WF      VSA+FSLA KLQPAIIFIDEVDSFLGQ R+ D+   ++MKTEFM+LWDG
Sbjct: 159 MSKWFGDAQKLVSAVFSLAYKLQPAIIFIDEVDSFLGQRRSTDNEAMSNMKTEFMALWDG 218

Query: 168 FTT 160
           FTT
Sbjct: 219 FTT 221



 Score = 31.2 bits (69), Expect(2) = 1e-16
 Identities = 13/17 (76%), Positives = 17/17 (100%)
 Frame = -3

Query: 53  ENSRVLVLAATNRPTEL 3
           +N+RV+VLAATNRP+EL
Sbjct: 223 QNARVMVLAATNRPSEL 239


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