BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00033963
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA99487.1| retrotransposon protein, putative, unclassified [...    76   3e-12
ref|XP_004162147.1| PREDICTED: putative ribonuclease H protein A...    66   3e-09
gb|ABA97942.1| retrotransposon protein, putative, LINE subclass ...    66   3e-09
ref|XP_002453810.1| hypothetical protein SORBIDRAFT_04g018371 [S...    65   6e-09
ref|XP_002451883.1| hypothetical protein SORBIDRAFT_04g009210 [S...    64   1e-08

>gb|ABA99487.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1627

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 44/118 (37%), Positives = 64/118 (54%), Gaps = 2/118 (1%)
 Frame = +3

Query: 6    ISAAPRVKHFIWLLFHNGVLTQEYLYRLNLGPQSCCC-FCNISSETAEHLFLNCPKANAI 182
            I A PRVK F WL+  N +LT++ L++      S  C FC+  SE+ +HLFL+CP A+ I
Sbjct: 1473 IKAPPRVKVFSWLVLRNSILTKDNLFKRGWRKGSIKCQFCD-KSESIQHLFLDCPMAHFI 1531

Query: 183  WRLTSDAIR-KPINLVNGVSSGIWLNQILTGNDRFVQSIIAATIWYIWKARCNRIFRG 353
            W +    +  KP   V  + S  W+ +   GN + +   + A +W IWKAR    F G
Sbjct: 1532 WSVVECTLNVKPGRNVGEMFSS-WILKFGKGNGKLIMVGVTAVLWTIWKARNRACFDG 1588


>ref|XP_004162147.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Cucumis
           sativus]
          Length = 218

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 6/119 (5%)
 Frame = +3

Query: 21  RVKHFIWLLFHNGVLTQEYLYRL----NLGPQSCCCFCNISSETAEHLFLNCPKANAIWR 188
           R K F+W L H  + T + L R      + P S C  C  + E  +HLF +CP    +W+
Sbjct: 62  RCKFFVWTLLHECINTMDMLQRRLPTWTIKP-SWCILCKAAEEDRQHLFTHCPYTTLLWK 120

Query: 189 LTSDAIRKPINLVNG--VSSGIWLNQILTGNDRFVQSIIAATIWYIWKARCNRIFRGEE 359
                + KP+   N   +   ++  +  T      Q ++AAT+W IW  R  RIF+ EE
Sbjct: 121 KVEVILGKPLLFPNSTPLCKDLFKTKGKTQKQIINQHLVAATLWNIWNERNRRIFKEEE 179


>gb|ABA97942.1| retrotransposon protein, putative, LINE subclass [Oryza sativa
            Japonica Group]
          Length = 985

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 5/117 (4%)
 Frame = +3

Query: 12   AAPRVKHFIWLLFHNGVLTQEYLYRLNLGPQSCCCFCNISSETAEHLFLNCPKANAIWRL 191
            A PR  +F+WL+  N   T + L    L   +CC  C+ S ET +HL + CP++  +W +
Sbjct: 823  APPRCCYFLWLVALNRCWTADCLRSHGLSHPACCVLCDQSDETIDHLLVACPESRQLWWI 882

Query: 192  TSDAIRKPINL-VNGVSSGIWL----NQILTGNDRFVQSIIAATIWYIWKARCNRIF 347
               AI     L +N  S  IWL     +++  + R   +I     W IWK R  R+F
Sbjct: 883  ALRAIGHSECLPINEPSFHIWLCDSRKKVIKAHRRGFDTIATLVAWTIWKERNIRVF 939


>ref|XP_002453810.1| hypothetical protein SORBIDRAFT_04g018371 [Sorghum bicolor]
           gi|241933641|gb|EES06786.1| hypothetical protein
           SORBIDRAFT_04g018371 [Sorghum bicolor]
          Length = 498

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 2/118 (1%)
 Frame = +3

Query: 6   ISAAPRVKHFIWLLFHNGVLTQEYLYRLNLGPQSCCCFCNISSETAEHLFLNCPKANAIW 185
           ++  PRV+ F+WLL +N VLT++ L +        C FCN   E+  HLF  C  A  +W
Sbjct: 316 LNIPPRVQFFLWLLSNNRVLTRDNLAKRREVNDPTCLFCN-EKESITHLFFQCCVARNVW 374

Query: 186 RLTSDAIRKPINLVNGVSSGIWLNQILTGNDRFV--QSIIAATIWYIWKARCNRIFRG 353
              S  + K +       + +W+      N +++    + +A IW IWK R +  F+G
Sbjct: 375 EYISGCLNKVVGADFESVASLWI-----ANKKYMVCNIVTSAVIWVIWKLRNSLCFQG 427


>ref|XP_002451883.1| hypothetical protein SORBIDRAFT_04g009210 [Sorghum bicolor]
           gi|241931714|gb|EES04859.1| hypothetical protein
           SORBIDRAFT_04g009210 [Sorghum bicolor]
          Length = 360

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 37/128 (28%), Positives = 54/128 (42%), Gaps = 5/128 (3%)
 Frame = +3

Query: 9   SAAPRVKHFIWLLFHNGVLTQEYLYRLNLGPQSCCCFCNISSETAEHLFLNCPKANAIWR 188
           +A PRV++F WL  H    T    +R  L     C  C+  SET +H+  NCP +  +W 
Sbjct: 206 AAPPRVRYFFWLTLHGRCWTGHRRFRHGLQDSDVCIVCDQHSETMDHILANCPFSREVWH 265

Query: 189 LTSDAIR--KPINLVNGVSSGIWLNQ---ILTGNDRFVQSIIAATIWYIWKARCNRIFRG 353
              D +    P+ L  G +   W      +     +   S +    W +WK R  R F+G
Sbjct: 266 RCLDRLHLAHPLQLPLGRALDWWTTSRKLVPRALRKGFDSFVLLVGWSLWKERNARTFQG 325

Query: 354 EELDIPSL 377
           E    P L
Sbjct: 326 ETSAAPVL 333