BLASTX nr result

ID: Dioscorea21_contig00033959 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00033959
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002965496.1| hypothetical protein SELMODRAFT_230663 [Sela...    51   5e-07
dbj|BAK00196.1| predicted protein [Hordeum vulgare subsp. vulgare]     47   1e-06
ref|XP_002982973.1| hypothetical protein SELMODRAFT_117604 [Sela...    51   1e-06
ref|XP_002440849.1| hypothetical protein SORBIDRAFT_09g008180 [S...    49   1e-06
ref|XP_003565551.1| PREDICTED: branched-chain-amino-acid aminotr...    46   1e-06

>ref|XP_002965496.1| hypothetical protein SELMODRAFT_230663 [Selaginella moellendorffii]
           gi|300166310|gb|EFJ32916.1| hypothetical protein
           SELMODRAFT_230663 [Selaginella moellendorffii]
          Length = 300

 Score = 51.2 bits (121), Expect(2) = 5e-07
 Identities = 25/52 (48%), Positives = 38/52 (73%)
 Frame = -2

Query: 310 GFVTEGPKMNVAFISENKEMVWCLHLRGHLSGCTSRRVLAMRDKLVKDGIVN 155
           GFV EGP +NVAFIS+++E++        LSGCT+RR +A+  KLV+ G+++
Sbjct: 175 GFVAEGPNVNVAFISKSRELL-VPEFDKILSGCTARRTVALAPKLVESGVLS 225



 Score = 27.3 bits (59), Expect(2) = 5e-07
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = -1

Query: 104 SSYPVLPIIEWDGQL 60
           SS P+ P+++WDGQ+
Sbjct: 248 SSLPITPVVKWDGQV 262


>dbj|BAK00196.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 331

 Score = 47.4 bits (111), Expect(2) = 1e-06
 Identities = 23/52 (44%), Positives = 39/52 (75%)
 Frame = -2

Query: 313 RGFVTEGPKMNVAFISENKEMVWCLHLRGHLSGCTSRRVLAMRDKLVKDGIV 158
           +G+V EGP +NVAF+++  E+V  +  +  LSGCT++R+LA+  KLV+ G++
Sbjct: 210 QGYVAEGPMVNVAFVTQGGELVLPVFDK-ILSGCTAKRMLALAPKLVEAGLL 260



 Score = 30.0 bits (66), Expect(2) = 1e-06
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = -1

Query: 113 YLVSSYPVLPIIEWDGQ 63
           ++ S  PVLPI+EWDGQ
Sbjct: 281 FVGSGLPVLPIVEWDGQ 297


>ref|XP_002982973.1| hypothetical protein SELMODRAFT_117604 [Selaginella moellendorffii]
           gi|300149126|gb|EFJ15782.1| hypothetical protein
           SELMODRAFT_117604 [Selaginella moellendorffii]
          Length = 320

 Score = 51.2 bits (121), Expect(2) = 1e-06
 Identities = 25/52 (48%), Positives = 38/52 (73%)
 Frame = -2

Query: 310 GFVTEGPKMNVAFISENKEMVWCLHLRGHLSGCTSRRVLAMRDKLVKDGIVN 155
           GFV EGP +NVAFIS+++E++        LSGCT+RR +A+  KLV+ G+++
Sbjct: 195 GFVAEGPNVNVAFISKSRELL-VPEFDKILSGCTARRTVALAPKLVESGVLS 245



 Score = 26.2 bits (56), Expect(2) = 1e-06
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = -1

Query: 104 SSYPVLPIIEWDGQL 60
           S+ P+ P+++WDGQ+
Sbjct: 268 STLPITPVVKWDGQV 282


>ref|XP_002440849.1| hypothetical protein SORBIDRAFT_09g008180 [Sorghum bicolor]
           gi|241946134|gb|EES19279.1| hypothetical protein
           SORBIDRAFT_09g008180 [Sorghum bicolor]
          Length = 330

 Score = 48.9 bits (115), Expect(2) = 1e-06
 Identities = 30/69 (43%), Positives = 42/69 (60%)
 Frame = -2

Query: 310 GFVTEGPKMNVAFISENKEMVWCLHLRGHLSGCTSRRVLAMRDKLVKDGIVNVNGWRD*R 131
           G+V EGP MNVAF++   ++V     R  LSGCT++RVLA+  +LV  G+  +   RD R
Sbjct: 210 GYVAEGPTMNVAFVTTGGDLVLPAFDR-VLSGCTAKRVLALAPELVGAGL--LRSVRDAR 266

Query: 130 FS*DDVTWC 104
            S D+   C
Sbjct: 267 ISADEARQC 275



 Score = 28.1 bits (61), Expect(2) = 1e-06
 Identities = 9/17 (52%), Positives = 14/17 (82%)
 Frame = -1

Query: 113 YLVSSYPVLPIIEWDGQ 63
           +L S  P+LP++EWDG+
Sbjct: 280 FLGSGLPLLPVVEWDGK 296


>ref|XP_003565551.1| PREDICTED: branched-chain-amino-acid aminotransferase-like protein
           3, chloroplastic-like [Brachypodium distachyon]
          Length = 328

 Score = 45.8 bits (107), Expect(2) = 1e-06
 Identities = 22/52 (42%), Positives = 37/52 (71%)
 Frame = -2

Query: 313 RGFVTEGPKMNVAFISENKEMVWCLHLRGHLSGCTSRRVLAMRDKLVKDGIV 158
           +G+V EGP +NVAF++   E+V     +  LSGCT++R+LA+  +LV+ G++
Sbjct: 207 QGYVAEGPMVNVAFVTPGNELVLPAFDK-ILSGCTAKRLLALAPRLVEQGLL 257



 Score = 31.2 bits (69), Expect(2) = 1e-06
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -1

Query: 143 ERLKIQLR*CYLVSSYPVLPIIEWDGQ 63
           E  K  +   ++ S  PVLPI+EWDGQ
Sbjct: 268 EEAKRSVEMAFVGSGLPVLPIVEWDGQ 294


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