BLASTX nr result

ID: Dioscorea21_contig00033920 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00033920
         (541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39588.3| unnamed protein product [Vitis vinifera]              224   5e-57
ref|XP_002277995.1| PREDICTED: peptide chain release factor 2-li...   224   5e-57
emb|CAN69654.1| hypothetical protein VITISV_010541 [Vitis vinifera]   224   5e-57
gb|AAG51510.1|AC058785_13 peptide chain release factor 2, putati...   223   2e-56
ref|NP_176032.2| Peptide chain release factor 2 [Arabidopsis tha...   223   2e-56

>emb|CBI39588.3| unnamed protein product [Vitis vinifera]
          Length = 472

 Score =  224 bits (572), Expect = 5e-57
 Identities = 107/121 (88%), Positives = 117/121 (96%)
 Frame = +3

Query: 3   DLRIERFRAGGAGGQHVNTTERAVRITHIPTGISATCQNERSQHSNKASAMSVLQSRLDQ 182
           DLRIERFRAGGAGGQHVNTTE AVRI HIPTG++ATCQNERSQH NKASAM+VLQSRLDQ
Sbjct: 335 DLRIERFRAGGAGGQHVNTTESAVRIVHIPTGVTATCQNERSQHQNKASAMAVLQSRLDQ 394

Query: 183 LEMARQAQLNAEHTQSLTEISWGNHIRSYVLHPYRMVKDLRTNYEVSDPDSVLEGELDGF 362
           LE++RQAQ+NA+HTQSLT+ISWGN IR+YVLHPYRMVKDLRTNYEVSDPDSVLEG+LDGF
Sbjct: 395 LEISRQAQINAQHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGF 454

Query: 363 I 365
           I
Sbjct: 455 I 455


>ref|XP_002277995.1| PREDICTED: peptide chain release factor 2-like [Vitis vinifera]
          Length = 434

 Score =  224 bits (572), Expect = 5e-57
 Identities = 107/121 (88%), Positives = 117/121 (96%)
 Frame = +3

Query: 3   DLRIERFRAGGAGGQHVNTTERAVRITHIPTGISATCQNERSQHSNKASAMSVLQSRLDQ 182
           DLRIERFRAGGAGGQHVNTTE AVRI HIPTG++ATCQNERSQH NKASAM+VLQSRLDQ
Sbjct: 297 DLRIERFRAGGAGGQHVNTTESAVRIVHIPTGVTATCQNERSQHQNKASAMAVLQSRLDQ 356

Query: 183 LEMARQAQLNAEHTQSLTEISWGNHIRSYVLHPYRMVKDLRTNYEVSDPDSVLEGELDGF 362
           LE++RQAQ+NA+HTQSLT+ISWGN IR+YVLHPYRMVKDLRTNYEVSDPDSVLEG+LDGF
Sbjct: 357 LEISRQAQINAQHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGF 416

Query: 363 I 365
           I
Sbjct: 417 I 417


>emb|CAN69654.1| hypothetical protein VITISV_010541 [Vitis vinifera]
          Length = 426

 Score =  224 bits (572), Expect = 5e-57
 Identities = 107/121 (88%), Positives = 117/121 (96%)
 Frame = +3

Query: 3   DLRIERFRAGGAGGQHVNTTERAVRITHIPTGISATCQNERSQHSNKASAMSVLQSRLDQ 182
           DLRIERFRAGGAGGQHVNTTE AVRI HIPTG++ATCQNERSQH NKASAM+VLQSRLDQ
Sbjct: 289 DLRIERFRAGGAGGQHVNTTESAVRIVHIPTGVTATCQNERSQHQNKASAMAVLQSRLDQ 348

Query: 183 LEMARQAQLNAEHTQSLTEISWGNHIRSYVLHPYRMVKDLRTNYEVSDPDSVLEGELDGF 362
           LE++RQAQ+NA+HTQSLT+ISWGN IR+YVLHPYRMVKDLRTNYEVSDPDSVLEG+LDGF
Sbjct: 349 LEISRQAQINAQHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGF 408

Query: 363 I 365
           I
Sbjct: 409 I 409


>gb|AAG51510.1|AC058785_13 peptide chain release factor 2, putative [Arabidopsis thaliana]
          Length = 426

 Score =  223 bits (567), Expect = 2e-56
 Identities = 107/121 (88%), Positives = 115/121 (95%)
 Frame = +3

Query: 3   DLRIERFRAGGAGGQHVNTTERAVRITHIPTGISATCQNERSQHSNKASAMSVLQSRLDQ 182
           DLRIERFR+GGAGGQH NTT+ AVRI HIPTGI+ATCQNERSQHSNKASAM+VLQSRLDQ
Sbjct: 291 DLRIERFRSGGAGGQHANTTDSAVRIVHIPTGITATCQNERSQHSNKASAMAVLQSRLDQ 350

Query: 183 LEMARQAQLNAEHTQSLTEISWGNHIRSYVLHPYRMVKDLRTNYEVSDPDSVLEGELDGF 362
           LEMARQ  +NA+HTQSLTEISWGN IR+YVLHPYRMVKDLRTNYEVSDPDSVLEG+LDGF
Sbjct: 351 LEMARQTAMNAQHTQSLTEISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGF 410

Query: 363 I 365
           I
Sbjct: 411 I 411


>ref|NP_176032.2| Peptide chain release factor 2 [Arabidopsis thaliana]
           gi|332195261|gb|AEE33382.1| Peptide chain release factor
           2 [Arabidopsis thaliana]
          Length = 482

 Score =  223 bits (567), Expect = 2e-56
 Identities = 107/121 (88%), Positives = 115/121 (95%)
 Frame = +3

Query: 3   DLRIERFRAGGAGGQHVNTTERAVRITHIPTGISATCQNERSQHSNKASAMSVLQSRLDQ 182
           DLRIERFR+GGAGGQH NTT+ AVRI HIPTGI+ATCQNERSQHSNKASAM+VLQSRLDQ
Sbjct: 347 DLRIERFRSGGAGGQHANTTDSAVRIVHIPTGITATCQNERSQHSNKASAMAVLQSRLDQ 406

Query: 183 LEMARQAQLNAEHTQSLTEISWGNHIRSYVLHPYRMVKDLRTNYEVSDPDSVLEGELDGF 362
           LEMARQ  +NA+HTQSLTEISWGN IR+YVLHPYRMVKDLRTNYEVSDPDSVLEG+LDGF
Sbjct: 407 LEMARQTAMNAQHTQSLTEISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGF 466

Query: 363 I 365
           I
Sbjct: 467 I 467


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