BLASTX nr result

ID: Dioscorea21_contig00033919 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00033919
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK42131.1| unknown [Medicago truncatula]                           49   2e-08
emb|CAN63444.1| hypothetical protein VITISV_001105 [Vitis vinifera]    45   3e-08
emb|CBI19318.3| unnamed protein product [Vitis vinifera]               45   3e-08
ref|XP_002283639.1| PREDICTED: uncharacterized protein LOC100260...    45   3e-08
ref|XP_002458355.1| hypothetical protein SORBIDRAFT_03g031920 [S...    50   3e-07

>gb|AFK42131.1| unknown [Medicago truncatula]
          Length = 248

 Score = 48.9 bits (115), Expect(2) = 2e-08
 Identities = 20/33 (60%), Positives = 24/33 (72%)
 Frame = -2

Query: 119 LRLHSCGKVERWIEEIWKWMV*FKDAVCDIVSE 21
           L+   CGKVERW+EEIW WM  FK+AV +I  E
Sbjct: 122 LQFQQCGKVERWLEEIWMWMFKFKEAVFEIALE 154



 Score = 34.7 bits (78), Expect(2) = 2e-08
 Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
 Frame = -3

Query: 244 TLASSMIVDKLLDNESTLVVTRSIVTGTSFYCAVMEEIAL--QNCG 113
           TL SS++   L D ++T VV +SI++GT+ +CA  EE+ L  Q CG
Sbjct: 85  TLISSLLTF-LRDTDAT-VVKQSIISGTNIFCACFEELILQFQQCG 128


>emb|CAN63444.1| hypothetical protein VITISV_001105 [Vitis vinifera]
          Length = 409

 Score = 44.7 bits (104), Expect(2) = 3e-08
 Identities = 19/30 (63%), Positives = 22/30 (73%)
 Frame = -2

Query: 119 LRLHSCGKVERWIEEIWKWMV*FKDAVCDI 30
           L+ H  GKVERW+EE+W WMV  KDAV  I
Sbjct: 120 LQFHRHGKVERWLEELWVWMVKLKDAVLAI 149



 Score = 37.7 bits (86), Expect(2) = 3e-08
 Identities = 20/42 (47%), Positives = 32/42 (76%), Gaps = 4/42 (9%)
 Frame = -3

Query: 235 SSMIVDKLL----DNESTLVVTRSIVTGTSFYCAVMEEIALQ 122
           SS++V  LL    D +S ++  +SIV+GT+F+C+V+EE+ALQ
Sbjct: 81  SSILVSVLLVFLRDGDS-IIAKQSIVSGTNFFCSVLEELALQ 121


>emb|CBI19318.3| unnamed protein product [Vitis vinifera]
          Length = 242

 Score = 44.7 bits (104), Expect(2) = 3e-08
 Identities = 19/30 (63%), Positives = 22/30 (73%)
 Frame = -2

Query: 119 LRLHSCGKVERWIEEIWKWMV*FKDAVCDI 30
           L+ H  GKVERW+EE+W WMV  KDAV  I
Sbjct: 120 LQFHRHGKVERWLEELWVWMVKLKDAVLAI 149



 Score = 37.7 bits (86), Expect(2) = 3e-08
 Identities = 20/42 (47%), Positives = 32/42 (76%), Gaps = 4/42 (9%)
 Frame = -3

Query: 235 SSMIVDKLL----DNESTLVVTRSIVTGTSFYCAVMEEIALQ 122
           SS++V  LL    D +S ++  +SIV+GT+F+C+V+EE+ALQ
Sbjct: 81  SSILVSVLLVFLRDGDS-IIAKQSIVSGTNFFCSVLEELALQ 121


>ref|XP_002283639.1| PREDICTED: uncharacterized protein LOC100260884 [Vitis vinifera]
          Length = 241

 Score = 44.7 bits (104), Expect(2) = 3e-08
 Identities = 19/30 (63%), Positives = 22/30 (73%)
 Frame = -2

Query: 119 LRLHSCGKVERWIEEIWKWMV*FKDAVCDI 30
           L+ H  GKVERW+EE+W WMV  KDAV  I
Sbjct: 120 LQFHRHGKVERWLEELWVWMVKLKDAVLAI 149



 Score = 37.7 bits (86), Expect(2) = 3e-08
 Identities = 20/42 (47%), Positives = 32/42 (76%), Gaps = 4/42 (9%)
 Frame = -3

Query: 235 SSMIVDKLL----DNESTLVVTRSIVTGTSFYCAVMEEIALQ 122
           SS++V  LL    D +S ++  +SIV+GT+F+C+V+EE+ALQ
Sbjct: 81  SSILVSVLLVFLRDGDS-IIAKQSIVSGTNFFCSVLEELALQ 121


>ref|XP_002458355.1| hypothetical protein SORBIDRAFT_03g031920 [Sorghum bicolor]
           gi|241930330|gb|EES03475.1| hypothetical protein
           SORBIDRAFT_03g031920 [Sorghum bicolor]
          Length = 1232

 Score = 50.1 bits (118), Expect(2) = 3e-07
 Identities = 17/33 (51%), Positives = 27/33 (81%)
 Frame = -2

Query: 119 LRLHSCGKVERWIEEIWKWMV*FKDAVCDIVSE 21
           L+++ CGK+E W+E++W WM  FKDAVC +++E
Sbjct: 119 LQVNKCGKLETWLEDVWAWMKQFKDAVCGVMNE 151



 Score = 28.9 bits (63), Expect(2) = 3e-07
 Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
 Frame = -3

Query: 211 LDNESTLVVTRSIVTGTSFYCAVMEEIALQ--NCG 113
           L ++   VV +SI +GT+   AV+EE+ LQ   CG
Sbjct: 91  LKHDDPAVVKQSIASGTTLCAAVLEEMTLQVNKCG 125


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