BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00033901
         (631 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28135.3| unnamed protein product [Vitis vinifera]              152   2e-60
ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containi...   152   2e-60
gb|ACZ98537.1| PPR motif protein [Malus x domestica]                  137   2e-54
ref|XP_004149853.1| PREDICTED: pentatricopeptide repeat-containi...   118   3e-50
ref|XP_003628782.1| Pentatricopeptide repeat-containing protein ...   135   1e-49

>emb|CBI28135.3| unnamed protein product [Vitis vinifera]
          Length = 1974

 Score =  152 bits (384), Expect(2) = 2e-60
 Identities = 78/127 (61%), Positives = 88/127 (69%)
 Frame = +3

Query: 3    LQNRQVKEALDMFSQMQFTGVNPTLITWTTLIFGLALNGCGYEAIRLFGEMLSMNIRPSA 182
            L+N QV EA DMFSQMQ  G  P LITWTTLI GLA +G GYEAI  F +M    IRPS 
Sbjct: 1591 LRNGQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSI 1650

Query: 183  IVIAGVLLACAHMVSIWYGRVIHGYIMRKGFLSSVSVAASLIDMYAKCGSIDIAKKIFDM 362
              I  VLLAC  + S+WYGR IHG+I R  F  SV VA SL+DMYAKCGSID AKK+F M
Sbjct: 1651 ASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATSLVDMYAKCGSIDEAKKVFHM 1710

Query: 363  VSKRRYP 383
            +S +  P
Sbjct: 1711 MSSKELP 1717



 Score =  106 bits (264), Expect(2) = 2e-60
 Identities = 49/87 (56%), Positives = 66/87 (75%)
 Frame = +2

Query: 371  KEIPVYNAMLSGYALHRQAREALELYQSMQHFRTKPDEITFTALLSACSHAGLADEVLKV 550
            KE+P+YNAM+S YALH QA EAL L++ +Q    +PD ITFT++LSACSHAGL +E L +
Sbjct: 1714 KELPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDSITFTSILSACSHAGLVNEGLNL 1773

Query: 551  FAEMISMDHITPQKEHYDCMVNLLVNC 631
            FA+M+S  ++ P  EHY C+V+LL  C
Sbjct: 1774 FADMVSKHNMNPIMEHYGCVVSLLSRC 1800



 Score = 70.5 bits (171), Expect(2) = 1e-13
 Identities = 36/100 (36%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
 Frame = +3

Query: 75   LITWTTLIFGLALNGCGYEAIRLFGEMLSMNIRPSAIVIAGVLLACAHMVSIWYGRVIHG 254
            + +W  ++      G   +A+  F EM    + P   V+  VL AC  +  I  G+ +HG
Sbjct: 1242 VFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGVHG 1301

Query: 255  YIMRKGFLSSVSVAASLIDMYAKCGSIDIAKKIFD-MVSK 371
            Y+++ GF + V V++SL+DMY KCG ++ A+K+FD MV K
Sbjct: 1302 YVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEK 1341



 Score = 31.2 bits (69), Expect(2) = 1e-13
 Identities = 13/51 (25%), Positives = 30/51 (58%)
 Frame = +2

Query: 368  KKEIPVYNAMLSGYALHRQAREALELYQSMQHFRTKPDEITFTALLSACSH 520
            +K +  +N+M+ GY  +   +EA++++  M+    +P  +T  + LSA ++
Sbjct: 1340 EKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASAN 1390



 Score = 65.5 bits (158), Expect = 8e-09
 Identities = 40/119 (33%), Positives = 67/119 (56%)
 Frame = +3

Query: 18   VKEALDMFSQMQFTGVNPTLITWTTLIFGLALNGCGYEAIRLFGEMLSMNIRPSAIVIAG 197
            +++A  +FS+M    +   ++TW  LI     +    +A+ +   M S N+R  ++ ++ 
Sbjct: 1429 IEDAELVFSRM----LEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSS 1484

Query: 198  VLLACAHMVSIWYGRVIHGYIMRKGFLSSVSVAASLIDMYAKCGSIDIAKKIFDMVSKR 374
            +L A A   +I  G+  H Y +R+   S V VA S+IDMYAKC  ID A+K+FD  ++R
Sbjct: 1485 ILSASAVTSNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTER 1543


>ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like [Vitis vinifera]
          Length = 858

 Score =  152 bits (384), Expect(2) = 2e-60
 Identities = 78/127 (61%), Positives = 88/127 (69%)
 Frame = +3

Query: 3   LQNRQVKEALDMFSQMQFTGVNPTLITWTTLIFGLALNGCGYEAIRLFGEMLSMNIRPSA 182
           L+N QV EA DMFSQMQ  G  P LITWTTLI GLA +G GYEAI  F +M    IRPS 
Sbjct: 496 LRNGQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSI 555

Query: 183 IVIAGVLLACAHMVSIWYGRVIHGYIMRKGFLSSVSVAASLIDMYAKCGSIDIAKKIFDM 362
             I  VLLAC  + S+WYGR IHG+I R  F  SV VA SL+DMYAKCGSID AKK+F M
Sbjct: 556 ASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATSLVDMYAKCGSIDEAKKVFHM 615

Query: 363 VSKRRYP 383
           +S +  P
Sbjct: 616 MSSKELP 622



 Score =  106 bits (264), Expect(2) = 2e-60
 Identities = 49/87 (56%), Positives = 66/87 (75%)
 Frame = +2

Query: 371 KEIPVYNAMLSGYALHRQAREALELYQSMQHFRTKPDEITFTALLSACSHAGLADEVLKV 550
           KE+P+YNAM+S YALH QA EAL L++ +Q    +PD ITFT++LSACSHAGL +E L +
Sbjct: 619 KELPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDSITFTSILSACSHAGLVNEGLNL 678

Query: 551 FAEMISMDHITPQKEHYDCMVNLLVNC 631
           FA+M+S  ++ P  EHY C+V+LL  C
Sbjct: 679 FADMVSKHNMNPIMEHYGCVVSLLSRC 705



 Score = 70.5 bits (171), Expect(2) = 1e-13
 Identities = 36/100 (36%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
 Frame = +3

Query: 75  LITWTTLIFGLALNGCGYEAIRLFGEMLSMNIRPSAIVIAGVLLACAHMVSIWYGRVIHG 254
           + +W  ++      G   +A+  F EM    + P   V+  VL AC  +  I  G+ +HG
Sbjct: 147 VFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGVHG 206

Query: 255 YIMRKGFLSSVSVAASLIDMYAKCGSIDIAKKIFD-MVSK 371
           Y+++ GF + V V++SL+DMY KCG ++ A+K+FD MV K
Sbjct: 207 YVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEK 246



 Score = 31.2 bits (69), Expect(2) = 1e-13
 Identities = 13/51 (25%), Positives = 30/51 (58%)
 Frame = +2

Query: 368 KKEIPVYNAMLSGYALHRQAREALELYQSMQHFRTKPDEITFTALLSACSH 520
           +K +  +N+M+ GY  +   +EA++++  M+    +P  +T  + LSA ++
Sbjct: 245 EKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASAN 295



 Score = 65.5 bits (158), Expect = 8e-09
 Identities = 40/119 (33%), Positives = 67/119 (56%)
 Frame = +3

Query: 18  VKEALDMFSQMQFTGVNPTLITWTTLIFGLALNGCGYEAIRLFGEMLSMNIRPSAIVIAG 197
           +++A  +FS+M    +   ++TW  LI     +    +A+ +   M S N+R  ++ ++ 
Sbjct: 334 IEDAELVFSRM----LEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSS 389

Query: 198 VLLACAHMVSIWYGRVIHGYIMRKGFLSSVSVAASLIDMYAKCGSIDIAKKIFDMVSKR 374
           +L A A   +I  G+  H Y +R+   S V VA S+IDMYAKC  ID A+K+FD  ++R
Sbjct: 390 ILSASAVTSNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTER 448


>gb|ACZ98537.1| PPR motif protein [Malus x domestica]
          Length = 751

 Score =  137 bits (345), Expect(2) = 2e-54
 Identities = 65/127 (51%), Positives = 85/127 (66%)
 Frame = +3

Query: 3   LQNRQVKEALDMFSQMQFTGVNPTLITWTTLIFGLALNGCGYEAIRLFGEMLSMNIRPSA 182
           L + QV EA DMF QMQ  GV P L+TWTTLI GLA +G GYEAI  F  M    ++P+ 
Sbjct: 413 LNSGQVNEAKDMFLQMQSLGVQPNLVTWTTLISGLARSGFGYEAILTFQRMQEAGVKPNV 472

Query: 183 IVIAGVLLACAHMVSIWYGRVIHGYIMRKGFLSSVSVAASLIDMYAKCGSIDIAKKIFDM 362
           + I GVLLAC ++ S+  GR +HGY++R     S+ +A SL+DMYAKCG  D AK++FDM
Sbjct: 473 VSIIGVLLACINLASLQIGRALHGYLIRHSLYLSIPIATSLVDMYAKCGDRDQAKRVFDM 532

Query: 363 VSKRRYP 383
           +  +  P
Sbjct: 533 IPDKELP 539



 Score =  101 bits (251), Expect(2) = 2e-54
 Identities = 48/87 (55%), Positives = 62/87 (71%)
 Frame = +2

Query: 371 KEIPVYNAMLSGYALHRQAREALELYQSMQHFRTKPDEITFTALLSACSHAGLADEVLKV 550
           KE+P+YNAM+SG+ALH QA EAL LY+ ++    KPD ITFT  L ACSHA +  E L++
Sbjct: 536 KELPIYNAMISGFALHGQAVEALALYRCLKEEGLKPDNITFTNALYACSHAMMVSEGLEL 595

Query: 551 FAEMISMDHITPQKEHYDCMVNLLVNC 631
           F +M+S  +I P  EHY CMV+LL  C
Sbjct: 596 FVDMVSNHNINPSIEHYGCMVSLLSRC 622



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 35/114 (30%), Positives = 63/114 (55%)
 Frame = +3

Query: 18  VKEALDMFSQMQFTGVNPTLITWTTLIFGLALNGCGYEAIRLFGEMLSMNIRPSAIVIAG 197
           +++A  +FS+M    +   ++TW  LI G    G   +A+ +   M   N+R  ++ +A 
Sbjct: 251 IEDAESVFSRM----LEKDVVTWNLLISGYVQIGEVDKALNMCHLMRLENLRFDSVTLAT 306

Query: 198 VLLACAHMVSIWYGRVIHGYIMRKGFLSSVSVAASLIDMYAKCGSIDIAKKIFD 359
           ++ A A M ++  G+  H Y +R    S V V +S++DMYAKC  I  A+++F+
Sbjct: 307 LMSAFADMRNLKLGKEGHCYCIRNNLESDVVVVSSIVDMYAKCEKIGCARRVFN 360



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 33/132 (25%), Positives = 69/132 (52%), Gaps = 3/132 (2%)
 Frame = +3

Query: 78  ITWTTLIFGLALNGCGYEAIRLFGEMLSMNIRPSAIVIAGVLLACAHMVSIWYGRVIHGY 257
           + W ++I G   NG   EAI +F EM    + P+ + ++  L A A++ ++  G+  H  
Sbjct: 166 VAWNSMIVGYVQNGLNEEAIEVFYEMREEGVEPTQVTLSSFLSASANLGALQDGKQGHAI 225

Query: 258 IMRKGFLSSVSVAASLIDMYAKCGSIDIAKKIFDMVSKR---RYPCTMQCYLDMRCTGKL 428
            +  G   + ++ +SLI+ Y+K G I+ A+ +F  + ++    +   +  Y+ +   G++
Sbjct: 226 AVICGIEMTTNLGSSLINFYSKVGLIEDAESVFSRMLEKDVVTWNLLISGYVQI---GEV 282

Query: 429 EKLLNCTNLCNI 464
           +K LN  +L  +
Sbjct: 283 DKALNMCHLMRL 294


>ref|XP_004149853.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like [Cucumis sativus]
           gi|449520209|ref|XP_004167126.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like [Cucumis sativus]
          Length = 840

 Score =  118 bits (296), Expect(2) = 3e-50
 Identities = 61/127 (48%), Positives = 81/127 (63%)
 Frame = +3

Query: 3   LQNRQVKEALDMFSQMQFTGVNPTLITWTTLIFGLALNGCGYEAIRLFGEMLSMNIRPSA 182
           L   +V +A D F +MQ  G+ P LITWTTLI GLA NG G EA   F  M    I+P++
Sbjct: 495 LNKGKVDQAKDTFMEMQSLGICPNLITWTTLICGLAQNGLGDEAFLTFQSMEEAGIKPNS 554

Query: 183 IVIAGVLLACAHMVSIWYGRVIHGYIMRKGFLSSVSVAASLIDMYAKCGSIDIAKKIFDM 362
           + I+ +L AC+ M S+ +GR IH YI R     S  V  SL++MYAKCGSI+ AK++FDM
Sbjct: 555 LSISSLLSACSTMASLPHGRAIHCYITRHELSVSTPVLCSLVNMYAKCGSINQAKRVFDM 614

Query: 363 VSKRRYP 383
           + K+  P
Sbjct: 615 ILKKELP 621



 Score =  105 bits (263), Expect(2) = 3e-50
 Identities = 50/85 (58%), Positives = 65/85 (76%)
 Frame = +2

Query: 368 KKEIPVYNAMLSGYALHRQAREALELYQSMQHFRTKPDEITFTALLSACSHAGLADEVLK 547
           KKE+PVYNAM+SGYALH QA EAL L++ ++    KPDEITFT++LSAC HAGL  E L+
Sbjct: 617 KKELPVYNAMISGYALHGQAVEALSLFRRLKEECIKPDEITFTSILSACGHAGLVREGLE 676

Query: 548 VFAEMISMDHITPQKEHYDCMVNLL 622
           +F +M+S   I  Q EHY C+V++L
Sbjct: 677 LFIDMVSNHKIVAQAEHYGCLVSIL 701



 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 40/119 (33%), Positives = 68/119 (57%)
 Frame = +3

Query: 18  VKEALDMFSQMQFTGVNPTLITWTTLIFGLALNGCGYEAIRLFGEMLSMNIRPSAIVIAG 197
           V++A  +FS+M    +    +TW  L+ G   NG    A+ L   M S N+R  ++ +A 
Sbjct: 333 VEDAELVFSEM----LEKDTVTWNLLVSGYVHNGLVDRALDLCHVMQSENLRFDSVTLAS 388

Query: 198 VLLACAHMVSIWYGRVIHGYIMRKGFLSSVSVAASLIDMYAKCGSIDIAKKIFDMVSKR 374
           ++ A A   ++  G+  H + +R    S V+VA+S+IDMYAKC  ++ A+++FD  +KR
Sbjct: 389 IMAAAADSRNLKLGKEGHSFCVRNNLESDVAVASSIIDMYAKCEKLECARRVFDATAKR 447



 Score = 56.6 bits (135), Expect(2) = 9e-10
 Identities = 30/98 (30%), Positives = 50/98 (51%)
 Frame = +3

Query: 81  TWTTLIFGLALNGCGYEAIRLFGEMLSMNIRPSAIVIAGVLLACAHMVSIWYGRVIHGYI 260
           +W  ++   +  G   EA+  F EM    +     VI     A   +  I +G+ +H Y+
Sbjct: 148 SWAAIMGLKSRMGFNQEALMGFREMHEYGLLLDNFVIPIAFKASGALRWIGFGKSVHAYV 207

Query: 261 MRKGFLSSVSVAASLIDMYAKCGSIDIAKKIFDMVSKR 374
           ++ G    + VA SL+DMY KCG  + AKK+FD + ++
Sbjct: 208 VKMGLGGCIYVATSLLDMYGKCGLCEEAKKVFDKILEK 245



 Score = 32.0 bits (71), Expect(2) = 9e-10
 Identities = 15/57 (26%), Positives = 31/57 (54%)
 Frame = +2

Query: 368 KKEIPVYNAMLSGYALHRQAREALELYQSMQHFRTKPDEITFTALLSACSHAGLADE 538
           +K I  +N+M+  +  +    EA+E +  M+     P ++T ++ LSA ++  + DE
Sbjct: 244 EKNIVAWNSMIVNFTQNGLNAEAVETFYEMRVEGVAPTQVTLSSFLSASANLSVIDE 300


>ref|XP_003628782.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355522804|gb|AET03258.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1002

 Score =  135 bits (339), Expect(2) = 1e-49
 Identities = 66/126 (52%), Positives = 86/126 (68%)
 Frame = +3

Query: 6   QNRQVKEALDMFSQMQFTGVNPTLITWTTLIFGLALNGCGYEAIRLFGEMLSMNIRPSAI 185
           +N QV EA DMFS+MQ +GV P LITWTT+I GLA NG GYEA R+F +M    +RP++I
Sbjct: 530 RNGQVVEAQDMFSEMQLSGVTPNLITWTTMISGLAQNGLGYEASRVFQQMQGAGMRPNSI 589

Query: 186 VIAGVLLACAHMVSIWYGRVIHGYIMRKGFLSSVSVAASLIDMYAKCGSIDIAKKIFDMV 365
            I   L AC +M  + YGR IHGY+MR     S+ +  S+IDMYAKCG++D AK +F + 
Sbjct: 590 SITSALSACTNMALLNYGRSIHGYVMRNFMSFSLQITTSIIDMYAKCGNLDDAKFVFIIC 649

Query: 366 SKRRYP 383
           S +  P
Sbjct: 650 STKELP 655



 Score = 87.4 bits (215), Expect(2) = 1e-49
 Identities = 42/86 (48%), Positives = 57/86 (66%)
 Frame = +2

Query: 371 KEIPVYNAMLSGYALHRQAREALELYQSMQHFRTKPDEITFTALLSACSHAGLADEVLKV 550
           KE+PVYNAM+S YA H ++ EAL L+Q +      PD ITFT++LSACSH  L  E L++
Sbjct: 652 KELPVYNAMISAYASHGKSAEALALFQELVKQGIMPDHITFTSVLSACSHGRLLKEGLEL 711

Query: 551 FAEMISMDHITPQKEHYDCMVNLLVN 628
           F  M+    + P ++HY C+V LL N
Sbjct: 712 FKYMVCELQMKPSEKHYGCLVKLLTN 737



 Score = 69.7 bits (169), Expect(2) = 1e-13
 Identities = 38/106 (35%), Positives = 59/106 (55%), Gaps = 2/106 (1%)
 Frame = +3

Query: 66  NPTLITWTTLIFGLALNGCGYEAIRLFGEMLSMNIRPSAIVIAGVLLACAHMVSIWYGRV 245
           N  L ++  ++   A NG   EA+  + EM+     P   V+   L AC  +  I +GR 
Sbjct: 169 NQNLFSYAAIVGLQARNGLYKEALLSYVEMMEKGFCPDNFVVPNGLKACGGLRWIGFGRG 228

Query: 246 IHGYIMRKG--FLSSVSVAASLIDMYAKCGSIDIAKKIFDMVSKRR 377
           IHG++++ G  F   V VA SL+DMY KCG ++ A+K+FD +  R+
Sbjct: 229 IHGFVVKMGNEFDGCVYVATSLVDMYGKCGVLEDAEKVFDEMPNRK 274



 Score = 32.3 bits (72), Expect(2) = 1e-13
 Identities = 19/69 (27%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
 Frame = +2

Query: 368 KKEIPVYNAMLSGYALHRQAREALELYQSMQ-HFRTKPDEITFTALLSACSHAGLADEVL 544
           K+   V+N+M+ GY  +    EA+ L++ M+     +P E++ +   SAC++    +E  
Sbjct: 274 KRNDVVWNSMIVGYVQNGMNVEAVGLFEKMRFEGGVEPSEVSLSGFFSACANLEAVEEGK 333

Query: 545 KVFAEMISM 571
           +  A +I M
Sbjct: 334 QGHALVILM 342



 Score = 57.0 bits (136), Expect(2) = 1e-11
 Identities = 28/101 (27%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
 Frame = +3

Query: 78  ITWTTLIFGLALNGCGYEAIRLFGEMLSM-NIRPSAIVIAGVLLACAHMVSIWYGRVIHG 254
           +TW  +I      G   +A+ +   M    N+R   + ++ +L   A    +  G+ +HG
Sbjct: 381 VTWNLMISSYVQFGMFEKALEMCHWMREEENLRFDCVTLSSLLALAADTRDVKLGKKLHG 440

Query: 255 YIMRKGFLSSVSVAASLIDMYAKCGSIDIAKKIFDMVSKRR 377
           + +R  F S ++V + ++DMYAKCG +D A+ +F    K++
Sbjct: 441 FCIRNEFYSDMAVLSGVLDMYAKCGIMDCARGVFHFAGKKK 481



 Score = 37.7 bits (86), Expect(2) = 1e-11
 Identities = 24/85 (28%), Positives = 44/85 (51%)
 Frame = +2

Query: 362 GFKKEIPVYNAMLSGYALHRQAREALELYQSMQHFRTKPDEITFTALLSACSHAGLADEV 541
           G KK+I ++N ML+  A    + EAL+L+  MQ     P+ +++ +L+      G   E 
Sbjct: 478 GKKKDIVLWNTMLAACAEKGLSGEALKLFFQMQMESVPPNVVSWNSLIFGFFRNGQVVEA 537

Query: 542 LKVFAEMISMDHITPQKEHYDCMVN 616
             +F+EM  +  +TP    +  M++
Sbjct: 538 QDMFSEM-QLSGVTPNLITWTTMIS 561