BLASTX nr result

ID: Dioscorea21_contig00033882 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00033882
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_16599981.1| hypothetical protein HMPREF9565_01483 [Propio...   232   2e-59
gb|ABP91180.1| unknown protein [Streptococcus suis 98HAH33] gi|1...    80   2e-26
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-3] gi...   117   1e-24
ref|ZP_16599980.1| hypothetical protein HMPREF9565_01484, partia...    98   8e-19
ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lacto...    75   2e-17

>ref|ZP_16599981.1| hypothetical protein HMPREF9565_01483 [Propionibacterium acnes
           HL053PA2] gi|315078257|gb|EFT50296.1| hypothetical
           protein HMPREF9565_01483 [Propionibacterium acnes
           HL053PA2]
          Length = 113

 Score =  232 bits (592), Expect = 2e-59
 Identities = 106/108 (98%), Positives = 107/108 (99%)
 Frame = -2

Query: 346 LRIPPLHQEFHSPLPSSSQPVSKARSGLSPKITLPTRSTAYEPFTPNKSGQRSHPTYHRG 167
           +RIPPLHQEFHSPLPSSSQPVSKARSGLSPKITLPTRST YEPFTPNKSGQRSHPTYHRG
Sbjct: 1   MRIPPLHQEFHSPLPSSSQPVSKARSGLSPKITLPTRSTTYEPFTPNKSGQRSHPTYHRG 60

Query: 166 CWHVVSRCFFTHYRHSRFVTGESGLQPEGRHPARGVAASGFRPLCNIP 23
           CWHVVSRCFFTHYRHSRFVTGESGLQPEGRHPARGVAASGFRPLCNIP
Sbjct: 61  CWHVVSRCFFTHYRHSRFVTGESGLQPEGRHPARGVAASGFRPLCNIP 108


>gb|ABP91180.1| unknown protein [Streptococcus suis 98HAH33]
           gi|145690754|gb|ABP91259.1| unknown protein
           [Streptococcus suis 98HAH33] gi|145690985|gb|ABP91490.1|
           unknown protein [Streptococcus suis 98HAH33]
           gi|145691080|gb|ABP91585.1| unknown protein
           [Streptococcus suis 98HAH33]
          Length = 186

 Score = 80.5 bits (197), Expect(3) = 2e-26
 Identities = 45/88 (51%), Positives = 51/88 (57%), Gaps = 7/88 (7%)
 Frame = -2

Query: 265 LSPKITLPTRSTAYEPFTPNKSGQRSHPTYHRGCWHVVSRCFFTHYRH-------SRFVT 107
           LS  + L T  TA   FTPNKSGQRS PTY+RGCWHVVSR F   YR        S+F +
Sbjct: 94  LSHSLLLQTYQTACARFTPNKSGQRSGPTYYRGCWHVVSRPFLVRYRQVRNFPLFSQFFS 153

Query: 106 GESGLQPEGRHPARGVAASGFRPLCNIP 23
               L+ E    +RGVA SG  PL  IP
Sbjct: 154 YNRALRSENLLHSRGVARSGLPPLPKIP 181



 Score = 60.5 bits (145), Expect(3) = 2e-26
 Identities = 33/61 (54%), Positives = 35/61 (57%)
 Frame = -1

Query: 452 RGLPGYLSLFAPHAFAXXXXXXXXXXPSPLVFLLISAHSTAPPGIPFSPTFLKSTRIEST 273
           RGLPGYL LFAPHAF            SP VFL IS H TA  GIP SP+ LK    +S 
Sbjct: 32  RGLPGYLILFAPHAFEPQRQLQTREPLSPPVFLHISTHFTATHGIPLSPSALKFDSFQSV 91

Query: 272 L 270
           L
Sbjct: 92  L 92



 Score = 23.1 bits (48), Expect(3) = 2e-26
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 47  LPPIVQYSHCCLP 9
           LPP+ +  +CCLP
Sbjct: 174 LPPLPKIPYCCLP 186


>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-3]
           gi|238832245|gb|EEQ24559.1| pG1 protein [Lactobacillus
           jensenii 269-3]
          Length = 174

 Score =  117 bits (293), Expect = 1e-24
 Identities = 72/144 (50%), Positives = 82/144 (56%), Gaps = 7/144 (4%)
 Frame = -2

Query: 412 LSLLSVRKGPENRLRHWCSS*YLRIPPLHQEFHSPLPSSSQPVSKARSGLSPKITLPTRS 233
           LS LSV   PE+RLRHWCSS YLRIPPLH EF SPL  S   VS A   LS +++  T  
Sbjct: 2   LSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQ 61

Query: 232 TAYEPFTPNKSGQRSHPTYHRGCWHVVSRCFFTHYRH---SRFVTGESG----LQPEGRH 74
           +A   FTPNKSGQR  PTY+RGCWHVVSR F   YR    S ++   S       P+   
Sbjct: 62  SACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTELYDPKTFF 121

Query: 73  PARGVAASGFRPLCNIPTAASRRS 2
               +    F      PTAASRRS
Sbjct: 122 THAALLHQTFVHCGRFPTAASRRS 145


>ref|ZP_16599980.1| hypothetical protein HMPREF9565_01484, partial [Propionibacterium
           acnes HL053PA2] gi|315078258|gb|EFT50297.1| hypothetical
           protein HMPREF9565_01484 [Propionibacterium acnes
           HL053PA2]
          Length = 48

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 46/46 (100%), Positives = 46/46 (100%)
 Frame = +2

Query: 314 MEFLVERWNAQISGGTPVAKAVLWAFPDAEERKRGERTGLDTLVVH 451
           MEFLVERWNAQISGGTPVAKAVLWAFPDAEERKRGERTGLDTLVVH
Sbjct: 1   MEFLVERWNAQISGGTPVAKAVLWAFPDAEERKRGERTGLDTLVVH 46


>ref|YP_003602124.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus ST1]
           gi|295031620|emb|CBL51099.1| PG1 protein, homology to
           Homo sapiens [Lactobacillus crispatus ST1]
          Length = 144

 Score = 75.5 bits (184), Expect(2) = 2e-17
 Identities = 39/66 (59%), Positives = 44/66 (66%)
 Frame = -2

Query: 322 EFHSPLPSSSQPVSKARSGLSPKITLPTRSTAYEPFTPNKSGQRSHPTYHRGCWHVVSRC 143
           EFHSPL  S + VS A   LS  ++  T S+A   FTPNKSGQR  PTY+RGCWHVVSR 
Sbjct: 2   EFHSPLLHSRKTVSDAVPRLSRGLSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRD 61

Query: 142 FFTHYR 125
           F   YR
Sbjct: 62  FLVDYR 67



 Score = 38.5 bits (88), Expect(2) = 2e-17
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = -3

Query: 120 HASSQAKAVYNPKAVIPHAALLHQASAHCAIFP 22
           + SS    +Y+PK    HAALLHQ   HC  FP
Sbjct: 76  YPSSPTTELYDPKTFFTHAALLHQTCVHCGRFP 108


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