BLASTX nr result

ID: Dioscorea21_contig00033835 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00033835
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37530.3| unnamed protein product [Vitis vinifera]               99   5e-19
ref|XP_002274138.1| PREDICTED: probable polygalacturonase [Vitis...    99   5e-19
emb|CAN76963.1| hypothetical protein VITISV_043959 [Vitis vinifera]    94   9e-18
ref|XP_002310517.1| predicted protein [Populus trichocarpa] gi|2...    92   3e-17
ref|XP_003526865.1| PREDICTED: probable polygalacturonase-like [...    92   4e-17

>emb|CBI37530.3| unnamed protein product [Vitis vinifera]
          Length = 528

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 46/81 (56%), Positives = 60/81 (74%)
 Frame = -3

Query: 306 WDRKALPRINGIFISNIVGVGIMKAPVLEGIEGTIFDRICLKNVSLDCQGNRAEWQCEFV 127
           WD KA+P+I GIFISN+V +   KAP+LEGIEG  ++ IC+KNV+L      A+W CEFV
Sbjct: 393 WDPKAVPKIKGIFISNVVSLNSTKAPLLEGIEGAPYEGICMKNVTLLGLAPAAKWHCEFV 452

Query: 126 AGKSDNVFPSPCDQLRSNVSS 64
           +G +D VFP  C Q++SNVSS
Sbjct: 453 SGFTDAVFPVSCPQMQSNVSS 473


>ref|XP_002274138.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
          Length = 488

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 46/81 (56%), Positives = 60/81 (74%)
 Frame = -3

Query: 306 WDRKALPRINGIFISNIVGVGIMKAPVLEGIEGTIFDRICLKNVSLDCQGNRAEWQCEFV 127
           WD KA+P+I GIFISN+V +   KAP+LEGIEG  ++ IC+KNV+L      A+W CEFV
Sbjct: 393 WDPKAVPKIKGIFISNVVSLNSTKAPLLEGIEGAPYEGICMKNVTLLGLAPAAKWHCEFV 452

Query: 126 AGKSDNVFPSPCDQLRSNVSS 64
           +G +D VFP  C Q++SNVSS
Sbjct: 453 SGFTDAVFPVSCPQMQSNVSS 473


>emb|CAN76963.1| hypothetical protein VITISV_043959 [Vitis vinifera]
          Length = 479

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 43/82 (52%), Positives = 60/82 (73%)
 Frame = -3

Query: 306 WDRKALPRINGIFISNIVGVGIMKAPVLEGIEGTIFDRICLKNVSLDCQGNRAEWQCEFV 127
           WD KA+P+I GIFISN+V +   KAP+LEGIEG  ++ IC+KNV+L      A+W CEFV
Sbjct: 382 WDPKAVPKIKGIFISNVVSLNSTKAPLLEGIEGAPYEGICMKNVTLLGLAPAAKWHCEFV 441

Query: 126 AGKSDNVFPSPCDQLRSNVSSL 61
           +G +D VFP  C Q++SN +++
Sbjct: 442 SGFTDAVFPVSCPQMQSNEATV 463


>ref|XP_002310517.1| predicted protein [Populus trichocarpa] gi|222853420|gb|EEE90967.1|
           predicted protein [Populus trichocarpa]
          Length = 445

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 43/81 (53%), Positives = 55/81 (67%)
 Frame = -3

Query: 306 WDRKALPRINGIFISNIVGVGIMKAPVLEGIEGTIFDRICLKNVSLDCQGNRAEWQCEFV 127
           WD KA+P + GI I N++     KAPVLEG+E   F  IC+KNVSL    +   W CEFV
Sbjct: 351 WDPKAVPVVKGISIRNVISFNSTKAPVLEGVEDAPFGGICMKNVSLLGVVSSLSWHCEFV 410

Query: 126 AGKSDNVFPSPCDQLRSNVSS 64
           +G +D VFP+PC QL+SN+SS
Sbjct: 411 SGFADEVFPTPCPQLQSNISS 431


>ref|XP_003526865.1| PREDICTED: probable polygalacturonase-like [Glycine max]
          Length = 477

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 43/84 (51%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
 Frame = -3

Query: 306 WDRKALPRINGIFISNIVGVGIMKAPVLEGIEGTIFDRICLKNVSLDCQGNRAEWQCEFV 127
           WD KA+PR   I ISN+V V   KAPVLEG+EG+ F+ +C KN++L      A W+CE+V
Sbjct: 391 WDPKAVPRFKDILISNVVSVNSTKAPVLEGVEGSSFEGLCFKNITLHGVALSARWRCEYV 450

Query: 126 AGKSDNVFPSPCDQLRSN-VSSLC 58
           +G +  VFP PC +LR+N  SS C
Sbjct: 451 SGFATEVFPVPCPELRNNSYSSWC 474


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