BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00033808
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]           117   1e-24
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...   117   1e-24
gb|ABF97084.1| retrotransposon protein, putative, unclassified [...   116   2e-24
gb|AAK52166.1|AC084831_20 putative reverse transcriptase [Oryza ...   116   2e-24
gb|AAB48348.1| reverse transcriptase, partial [Arabidopsis thali...   115   3e-24

>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score =  117 bits (292), Expect = 1e-24
 Identities = 56/115 (48%), Positives = 77/115 (66%)
 Frame = -3

Query: 367 KTPGPDGLNVEFYLFYWDIIRVPLFKAINQFFASAQLPNSWGKTFIVLIPKSDNPRLVSD 188
           KT GPDG +VEF+   W II   +  AI++FF S QL   W  T +VLIPK+ N   +S+
Sbjct: 323 KTSGPDGYSVEFFRDTWSIIGPEVLAAIHEFFDSGQLLKQWNATTLVLIPKTSNACTISE 382

Query: 187 FRPISLCNVSYKIVSKLLTNRLKHVLYKLVGHEQSAFLTGKSTFDNIIALQEIAH 23
           FRPIS  N  YK++SKLLT+RL+ +L  ++GH QSAFL G+S  +N++   E+ H
Sbjct: 383 FRPISCLNTLYKVISKLLTSRLQGLLSAVIGHSQSAFLPGRSLAENVLLATEMVH 437


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
           thaliana]
          Length = 1072

 Score =  117 bits (292), Expect = 1e-24
 Identities = 56/115 (48%), Positives = 77/115 (66%)
 Frame = -3

Query: 367 KTPGPDGLNVEFYLFYWDIIRVPLFKAINQFFASAQLPNSWGKTFIVLIPKSDNPRLVSD 188
           KT GPDG +VEF+   W II   +  AI++FF S QL   W  T +VLIPK+ N   +S+
Sbjct: 323 KTSGPDGYSVEFFRDTWSIIGPEVLAAIHEFFDSGQLLKQWNATTLVLIPKTSNACTISE 382

Query: 187 FRPISLCNVSYKIVSKLLTNRLKHVLYKLVGHEQSAFLTGKSTFDNIIALQEIAH 23
           FRPIS  N  YK++SKLLT+RL+ +L  ++GH QSAFL G+S  +N++   E+ H
Sbjct: 383 FRPISCLNTLYKVISKLLTSRLQGLLSAVIGHSQSAFLPGRSLAENVLLATEMVH 437


>gb|ABF97084.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1184

 Score =  116 bits (291), Expect = 2e-24
 Identities = 52/118 (44%), Positives = 78/118 (66%)
 Frame = -3

Query: 367 KTPGPDGLNVEFYLFYWDIIRVPLFKAINQFFASAQLPNSWGKTFIVLIPKSDNPRLVSD 188
           K PGPDGL+  FY  +WD++   L K +     + ++P+ W  T +V+IPK D P  V+ 
Sbjct: 307 KAPGPDGLHAVFYKRFWDMLESDLVKEVLDAINTMKIPDGWNDTTVVMIPKVDKPDRVTQ 366

Query: 187 FRPISLCNVSYKIVSKLLTNRLKHVLYKLVGHEQSAFLTGKSTFDNIIALQEIAHSLE 14
           FRPISLCNV YKI+SK+L NRLK +L +++  +QSAF+ G+   DN++   E  H+++
Sbjct: 367 FRPISLCNVVYKIISKMLANRLKCLLPEIISDQQSAFVPGRLITDNVLVAYECLHTMK 424


>gb|AAK52166.1|AC084831_20 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1185

 Score =  116 bits (291), Expect = 2e-24
 Identities = 52/118 (44%), Positives = 78/118 (66%)
 Frame = -3

Query: 367 KTPGPDGLNVEFYLFYWDIIRVPLFKAINQFFASAQLPNSWGKTFIVLIPKSDNPRLVSD 188
           K PGPDGL+  FY  +WD++   L K +     + ++P+ W  T +V+IPK D P  V+ 
Sbjct: 307 KAPGPDGLHAVFYKRFWDMLESDLVKEVLDAINTMKIPDGWNDTTVVMIPKVDKPDRVTQ 366

Query: 187 FRPISLCNVSYKIVSKLLTNRLKHVLYKLVGHEQSAFLTGKSTFDNIIALQEIAHSLE 14
           FRPISLCNV YKI+SK+L NRLK +L +++  +QSAF+ G+   DN++   E  H+++
Sbjct: 367 FRPISLCNVVYKIISKMLANRLKCLLPEIISDQQSAFVPGRLITDNVLVAYECLHTMK 424


>gb|AAB48348.1| reverse transcriptase, partial [Arabidopsis thaliana]
          Length = 199

 Score =  115 bits (289), Expect = 3e-24
 Identities = 55/118 (46%), Positives = 77/118 (65%)
 Frame = -3

Query: 361 PGPDGLNVEFYLFYWDIIRVPLFKAINQFFASAQLPNSWGKTFIVLIPKSDNPRLVSDFR 182
           PGPDG+   FY  +WD+    L K +  F +SA       +T I LIPK D PR +++FR
Sbjct: 2   PGPDGMTALFYQRFWDLTGPDLVKVVQNFHSSASFDERLNETNICLIPKIDRPRRMAEFR 61

Query: 181 PISLCNVSYKIVSKLLTNRLKHVLYKLVGHEQSAFLTGKSTFDNIIALQEIAHSLESD 8
           PISLCNVSYK++SK+L++RLK +L  L+   QSAF+ G+   DNI+  QE  H+L ++
Sbjct: 62  PISLCNVSYKVISKVLSSRLKKILPDLISETQSAFVAGRLITDNILVAQENFHALRTN 119