BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00033789
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15366.3| unnamed protein product [Vitis vinifera]              157   1e-36
ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containi...   154   6e-36
gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]             151   5e-35
ref|NP_564054.1| pentatricopeptide repeat-containing protein [Ar...   151   5e-35
ref|XP_002890279.1| pentatricopeptide repeat-containing protein ...   149   2e-34

>emb|CBI15366.3| unnamed protein product [Vitis vinifera]
          Length = 783

 Score =  157 bits (396), Expect = 1e-36
 Identities = 67/128 (52%), Positives = 101/128 (78%)
 Frame = +1

Query: 58  QSHSIGFILQACGREGQLDVGRGVHQLIHSSPELTSNEILTTRLLTMYSMCGSLLDSRRV 237
           +S ++G +LQACG+   ++VGR +H+++ +S +  ++ +L TR++TMYSMCGS  DSR V
Sbjct: 104 RSEAMGVLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMV 163

Query: 238 FEAIEDKNLFHWNALISGYTRNELWDEVLCVFSQLISETELMPNNFTLPCVFKSCAGLLD 417
           F+ +  KNLF WNA++S YTRNEL+++ + +FS+LIS TE  P+NFTLPCV K+CAGLLD
Sbjct: 164 FDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLD 223

Query: 418 VGMGRALH 441
           +G+G+ +H
Sbjct: 224 LGLGQIIH 231



 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 45/145 (31%), Positives = 76/145 (52%)
 Frame = +1

Query: 7   ALQLLLQQCPDPSHLTSQSHSIGFILQACGREGQLDVGRGVHQLIHSSPELTSNEILTTR 186
           AL L LQ     S L     +IG +L AC R   L  G  +H     +  L  +  +   
Sbjct: 294 ALDLYLQMTD--SGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNG-LAVDPFIGIS 350

Query: 187 LLTMYSMCGSLLDSRRVFEAIEDKNLFHWNALISGYTRNELWDEVLCVFSQLISETELMP 366
           LL++Y  CG    ++ +F+ +E ++L  WN +I+GY++N L DE + +F Q++S+  + P
Sbjct: 351 LLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSD-GIQP 409

Query: 367 NNFTLPCVFKSCAGLLDVGMGRALH 441
               + CV  +C+ L  + +G+ LH
Sbjct: 410 YEIAIMCVCGACSQLSALRLGKELH 434



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 37/125 (29%), Positives = 72/125 (57%), Gaps = 4/125 (3%)
 Frame = +1

Query: 79  ILQACGREGQLDVGRGVHQLIH---SSPELTSNEILTTRLLTMYSMCGSLLDS-RRVFEA 246
           +++AC   G LD+G G  Q+IH   +  +L S+  +   L+ MY  CG + ++ +RVF+ 
Sbjct: 214 VIKACA--GLLDLGLG--QIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDL 269

Query: 247 IEDKNLFHWNALISGYTRNELWDEVLCVFSQLISETELMPNNFTLPCVFKSCAGLLDVGM 426
           ++ K +  WNAL+ GY +N    + L ++ Q+ +++ L P+ FT+  +  +C+ +  +  
Sbjct: 270 MDTKTVSSWNALLCGYAQNSDPRKALDLYLQM-TDSGLDPDWFTIGSLLLACSRMKSLHY 328

Query: 427 GRALH 441
           G  +H
Sbjct: 329 GEEIH 333


>ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Vitis vinifera]
          Length = 881

 Score =  154 bits (390), Expect = 6e-36
 Identities = 66/124 (53%), Positives = 98/124 (79%)
 Frame = +1

Query: 70  IGFILQACGREGQLDVGRGVHQLIHSSPELTSNEILTTRLLTMYSMCGSLLDSRRVFEAI 249
           +G +LQACG+   ++VGR +H+++ +S +  ++ +L TR++TMYSMCGS  DSR VF+ +
Sbjct: 1   MGVLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKL 60

Query: 250 EDKNLFHWNALISGYTRNELWDEVLCVFSQLISETELMPNNFTLPCVFKSCAGLLDVGMG 429
             KNLF WNA++S YTRNEL+++ + +FS+LIS TE  P+NFTLPCV K+CAGLLD+G+G
Sbjct: 61  RRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLG 120

Query: 430 RALH 441
           + +H
Sbjct: 121 QIIH 124



 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 45/145 (31%), Positives = 76/145 (52%)
 Frame = +1

Query: 7   ALQLLLQQCPDPSHLTSQSHSIGFILQACGREGQLDVGRGVHQLIHSSPELTSNEILTTR 186
           AL L LQ     S L     +IG +L AC R   L  G  +H     +  L  +  +   
Sbjct: 392 ALDLYLQMTD--SGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNG-LAVDPFIGIS 448

Query: 187 LLTMYSMCGSLLDSRRVFEAIEDKNLFHWNALISGYTRNELWDEVLCVFSQLISETELMP 366
           LL++Y  CG    ++ +F+ +E ++L  WN +I+GY++N L DE + +F Q++S+  + P
Sbjct: 449 LLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSD-GIQP 507

Query: 367 NNFTLPCVFKSCAGLLDVGMGRALH 441
               + CV  +C+ L  + +G+ LH
Sbjct: 508 YEIAIMCVCGACSQLSALRLGKELH 532



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 42/125 (33%), Positives = 69/125 (55%), Gaps = 4/125 (3%)
 Frame = +1

Query: 79  ILQACGREGQLDVGRGVHQLIH---SSPELTSNEILTTRLLTMYSMCGSLLDSRRVFEAI 249
           +++AC   G LD+G G  Q+IH   +  +L S+  +   L+ MY  CG + ++ +VFE +
Sbjct: 107 VIKACA--GLLDLGLG--QIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHM 162

Query: 250 EDKNLFHWNALISGYTRNELWDEVLCVFSQ-LISETELMPNNFTLPCVFKSCAGLLDVGM 426
            ++NL  WN++I G++ N    E    F + L+ E   +P+  TL  V   CAG  D+  
Sbjct: 163 PERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEK 222

Query: 427 GRALH 441
           G A+H
Sbjct: 223 GMAVH 227



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/95 (30%), Positives = 55/95 (57%)
 Frame = +1

Query: 157 LTSNEILTTRLLTMYSMCGSLLDSRRVFEAIEDKNLFHWNALISGYTRNELWDEVLCVFS 336
           L SNE++    +  Y+ CG+L  S RVF+ ++ K +  WNAL+ GY +N    + L ++ 
Sbjct: 338 LQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYL 397

Query: 337 QLISETELMPNNFTLPCVFKSCAGLLDVGMGRALH 441
           Q+ +++ L P+ FT+  +  +C+ +  +  G  +H
Sbjct: 398 QM-TDSGLDPDWFTIGSLLLACSRMKSLHYGEEIH 431


>gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
          Length = 1702

 Score =  151 bits (382), Expect = 5e-35
 Identities = 67/125 (53%), Positives = 98/125 (78%)
 Frame = +1

Query: 67  SIGFILQACGREGQLDVGRGVHQLIHSSPELTSNEILTTRLLTMYSMCGSLLDSRRVFEA 246
           ++G +LQA G+   +++GR +HQL+  S  L ++++L TR++TMY+MCGS  DSR VF+A
Sbjct: 441 ALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDA 500

Query: 247 IEDKNLFHWNALISGYTRNELWDEVLCVFSQLISETELMPNNFTLPCVFKSCAGLLDVGM 426
           +  KNLF WNA+IS Y+RNEL+DEVL  F ++IS T+L+P++FT PCV K+CAG+ DVG+
Sbjct: 501 LRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGI 560

Query: 427 GRALH 441
           G A+H
Sbjct: 561 GLAVH 565



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 42/133 (31%), Positives = 70/133 (52%)
 Frame = +1

Query: 43   SHLTSQSHSIGFILQACGREGQLDVGRGVHQLIHSSPELTSNEILTTRLLTMYSMCGSLL 222
            S L   S ++  +L AC +   L +G+ VH  I  +  L  +  +   +L++Y  CG L 
Sbjct: 845  SGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRN-WLERDLFVYLSVLSLYIHCGELC 903

Query: 223  DSRRVFEAIEDKNLFHWNALISGYTRNELWDEVLCVFSQLISETELMPNNFTLPCVFKSC 402
              + +F+A+EDK+L  WN +I+GY +N   D  L VF Q++     +     +P VF +C
Sbjct: 904  TVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMP-VFGAC 962

Query: 403  AGLLDVGMGRALH 441
            + L  + +GR  H
Sbjct: 963  SLLPSLRLGREAH 975



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 30/124 (24%), Positives = 64/124 (51%), Gaps = 3/124 (2%)
 Frame = +1

Query: 79  ILQACGREGQLDVGRGVHQLIHSSPELTSNEILTTRLLTMYSMCGSLLDSRRVFEAIEDK 258
           +++AC     + +G  VH L+  +  L  +  +   L++ Y   G + D+ ++F+ + ++
Sbjct: 548 VIKACAGMSDVGIGLAVHGLVVKTG-LVEDVFVGNALVSFYGTHGFVTDALQLFDIMPER 606

Query: 259 NLFHWNALISGYTRNELWDEVLCVFSQLISET---ELMPNNFTLPCVFKSCAGLLDVGMG 429
           NL  WN++I  ++ N   +E   +  +++ E      MP+  TL  V   CA   ++G+G
Sbjct: 607 NLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLG 666

Query: 430 RALH 441
           + +H
Sbjct: 667 KGVH 670



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 38/148 (25%), Positives = 70/148 (47%), Gaps = 1/148 (0%)
 Frame = +1

Query: 1    HAALQLLLQQCPDPSHLTSQSHSIGFILQACGREGQLDVGRGVHQLIHSSPELTSNEILT 180
            H    +L Q       + +   +I   +  C  E  L   + +H       E   NE++ 
Sbjct: 730  HGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELH-CYSLKQEFVYNELVA 788

Query: 181  TRLLTMYSMCGSLLDSRRVFEAIEDKNLFHWNALISGYTRNELWDEVLCVFSQL-ISETE 357
               +  Y+ CGSL  ++RVF  I  K +  WNALI G+ ++   D  L + + L +  + 
Sbjct: 789  NAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSN--DPRLSLDAHLQMKISG 846

Query: 358  LMPNNFTLPCVFKSCAGLLDVGMGRALH 441
            L+P++FT+  +  +C+ L  + +G+ +H
Sbjct: 847  LLPDSFTVCSLLSACSKLKSLRLGKEVH 874


>ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g18485 gi|332191599|gb|AEE29720.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 970

 Score =  151 bits (382), Expect = 5e-35
 Identities = 67/125 (53%), Positives = 98/125 (78%)
 Frame = +1

Query: 67  SIGFILQACGREGQLDVGRGVHQLIHSSPELTSNEILTTRLLTMYSMCGSLLDSRRVFEA 246
           ++G +LQA G+   +++GR +HQL+  S  L ++++L TR++TMY+MCGS  DSR VF+A
Sbjct: 86  ALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDA 145

Query: 247 IEDKNLFHWNALISGYTRNELWDEVLCVFSQLISETELMPNNFTLPCVFKSCAGLLDVGM 426
           +  KNLF WNA+IS Y+RNEL+DEVL  F ++IS T+L+P++FT PCV K+CAG+ DVG+
Sbjct: 146 LRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGI 205

Query: 427 GRALH 441
           G A+H
Sbjct: 206 GLAVH 210



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 42/133 (31%), Positives = 70/133 (52%)
 Frame = +1

Query: 43  SHLTSQSHSIGFILQACGREGQLDVGRGVHQLIHSSPELTSNEILTTRLLTMYSMCGSLL 222
           S L   S ++  +L AC +   L +G+ VH  I  +  L  +  +   +L++Y  CG L 
Sbjct: 490 SGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRN-WLERDLFVYLSVLSLYIHCGELC 548

Query: 223 DSRRVFEAIEDKNLFHWNALISGYTRNELWDEVLCVFSQLISETELMPNNFTLPCVFKSC 402
             + +F+A+EDK+L  WN +I+GY +N   D  L VF Q++     +     +P VF +C
Sbjct: 549 TVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMP-VFGAC 607

Query: 403 AGLLDVGMGRALH 441
           + L  + +GR  H
Sbjct: 608 SLLPSLRLGREAH 620



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 30/124 (24%), Positives = 64/124 (51%), Gaps = 3/124 (2%)
 Frame = +1

Query: 79  ILQACGREGQLDVGRGVHQLIHSSPELTSNEILTTRLLTMYSMCGSLLDSRRVFEAIEDK 258
           +++AC     + +G  VH L+  +  L  +  +   L++ Y   G + D+ ++F+ + ++
Sbjct: 193 VIKACAGMSDVGIGLAVHGLVVKTG-LVEDVFVGNALVSFYGTHGFVTDALQLFDIMPER 251

Query: 259 NLFHWNALISGYTRNELWDEVLCVFSQLISET---ELMPNNFTLPCVFKSCAGLLDVGMG 429
           NL  WN++I  ++ N   +E   +  +++ E      MP+  TL  V   CA   ++G+G
Sbjct: 252 NLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLG 311

Query: 430 RALH 441
           + +H
Sbjct: 312 KGVH 315



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 38/148 (25%), Positives = 70/148 (47%), Gaps = 1/148 (0%)
 Frame = +1

Query: 1   HAALQLLLQQCPDPSHLTSQSHSIGFILQACGREGQLDVGRGVHQLIHSSPELTSNEILT 180
           H    +L Q       + +   +I   +  C  E  L   + +H       E   NE++ 
Sbjct: 375 HGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELH-CYSLKQEFVYNELVA 433

Query: 181 TRLLTMYSMCGSLLDSRRVFEAIEDKNLFHWNALISGYTRNELWDEVLCVFSQL-ISETE 357
              +  Y+ CGSL  ++RVF  I  K +  WNALI G+ ++   D  L + + L +  + 
Sbjct: 434 NAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSN--DPRLSLDAHLQMKISG 491

Query: 358 LMPNNFTLPCVFKSCAGLLDVGMGRALH 441
           L+P++FT+  +  +C+ L  + +G+ +H
Sbjct: 492 LLPDSFTVCSLLSACSKLKSLRLGKEVH 519


>ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297336121|gb|EFH66538.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 953

 Score =  149 bits (377), Expect = 2e-34
 Identities = 66/125 (52%), Positives = 96/125 (76%)
 Frame = +1

Query: 67  SIGFILQACGREGQLDVGRGVHQLIHSSPELTSNEILTTRLLTMYSMCGSLLDSRRVFEA 246
           ++G +LQA G+   +++GR +H L+  S  L S+++L TR++TMY+MCGS  DSR  F+A
Sbjct: 86  ALGLLLQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDA 145

Query: 247 IEDKNLFHWNALISGYTRNELWDEVLCVFSQLISETELMPNNFTLPCVFKSCAGLLDVGM 426
           +  KNLF WNA+IS Y+RNEL+ EVL +F ++IS+T L+P+NFT PCV K+CAG+ DVG+
Sbjct: 146 LRSKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGI 205

Query: 427 GRALH 441
           G A+H
Sbjct: 206 GLAVH 210



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 1/148 (0%)
 Frame = +1

Query: 1   HAALQLLLQQCPDPSHLTSQSHSIGFILQACGREGQLDVGRGVHQLIHSSPELTSNEILT 180
           H    LL Q       + +   +I   +  C  E  L   + +H       E   +E+L 
Sbjct: 359 HGTFDLLRQMLAGSEDVKADEVTILNAVPVCFDESVLPSLKELH-CYSLKQEFVYDELLA 417

Query: 181 TRLLTMYSMCGSLLDSRRVFEAIEDKNLFHWNALISGYTRNELWDEVLCVFSQL-ISETE 357
              +  Y+ CGSL  ++RVF  I  K L  WNALI GY ++   D  L + + L +  + 
Sbjct: 418 NAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSS--DPRLSLDAHLQMKNSG 475

Query: 358 LMPNNFTLPCVFKSCAGLLDVGMGRALH 441
           L+P+NFT+  +  +C+ L  + +G+ +H
Sbjct: 476 LLPDNFTVCSLLSACSKLKSLRLGKEVH 503



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 37/133 (27%), Positives = 70/133 (52%)
 Frame = +1

Query: 43  SHLTSQSHSIGFILQACGREGQLDVGRGVHQLIHSSPELTSNEILTTRLLTMYSMCGSLL 222
           S L   + ++  +L AC +   L +G+ VH  I  +  L  +  +   +L++Y  CG L 
Sbjct: 474 SGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRN-WLERDLFVYLSVLSLYIHCGELC 532

Query: 223 DSRRVFEAIEDKNLFHWNALISGYTRNELWDEVLCVFSQLISETELMPNNFTLPCVFKSC 402
             + +F+A+ED +L  WN +I+G+ +N   +  L +F Q++    + P   ++  VF +C
Sbjct: 533 TVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMVL-YGIQPCGISMMTVFGAC 591

Query: 403 AGLLDVGMGRALH 441
           + L  + +GR  H
Sbjct: 592 SLLPSLRLGREAH 604