BLASTX nr result
ID: Dioscorea21_contig00033787
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00033787 (508 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera] 172 7e-48 emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] 175 3e-47 gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal... 175 3e-47 gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi... 174 9e-47 gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana] 174 9e-47 >emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera] Length = 1424 Score = 172 bits (437), Expect(2) = 7e-48 Identities = 80/138 (57%), Positives = 101/138 (73%) Frame = -2 Query: 507 SDRGGEFCSHEFQKYCEQWGIKRELTAPYTPQQNGVVERKNRTVVEMARCLLAGAALPLR 328 SDRG E+ S +F +CE G++R+LT YTPQQNGVVERKN+TV+EMA+ +L LP Sbjct: 660 SDRGMEYTSSQFGNFCEDEGVERQLTVAYTPQQNGVVERKNQTVMEMAKAMLYEKGLPKI 719 Query: 327 FWGEAVSTATYLINRSSTSALQGRTPYEVMHGSIPSVKHLRVFGCIAFTHIPSQRRQKLD 148 FW EAV+TA YL+NR T AL +TP E G PSV+H +VFGC+ ++ +P QRR KLD Sbjct: 720 FWAEAVNTAVYLLNRCPTKALLNKTPIEAWSGRKPSVRHFKVFGCLCYSQVPKQRRSKLD 779 Query: 147 EKSEKCIFIGYSIESKAY 94 E SEKCIF+GYS +SK Y Sbjct: 780 ETSEKCIFMGYSSQSKGY 797 Score = 43.1 bits (100), Expect(2) = 7e-48 Identities = 16/29 (55%), Positives = 23/29 (79%) Frame = -3 Query: 92 LYNPTSCRVIISRDVVFQEEARWNWQEGR 6 LYN + ++IISRDV+F E+ WNW+EG+ Sbjct: 799 LYNLKTXKLIISRDVIFDEKVAWNWEEGK 827 >emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] Length = 1352 Score = 175 bits (444), Expect(2) = 3e-47 Identities = 84/138 (60%), Positives = 99/138 (71%) Frame = -2 Query: 507 SDRGGEFCSHEFQKYCEQWGIKRELTAPYTPQQNGVVERKNRTVVEMARCLLAGAALPLR 328 SDRGGEF S EF KYCE GI+R+LT P +PQQNGVVERKNRT++EMAR +L LP Sbjct: 595 SDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLPKE 654 Query: 327 FWGEAVSTATYLINRSSTSALQGRTPYEVMHGSIPSVKHLRVFGCIAFTHIPSQRRQKLD 148 W EAV+ A YL+NRS T ++ G+TP E G P V HLRVFG IA H+P ++R KLD Sbjct: 655 LWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLD 714 Query: 147 EKSEKCIFIGYSIESKAY 94 +KSEK IFIGY SK Y Sbjct: 715 DKSEKYIFIGYDNNSKGY 732 Score = 38.1 bits (87), Expect(2) = 3e-47 Identities = 14/25 (56%), Positives = 19/25 (76%) Frame = -3 Query: 92 LYNPTSCRVIISRDVVFQEEARWNW 18 LYNP + + IISR++VF EE W+W Sbjct: 734 LYNPDTKKTIISRNIVFDEEGEWDW 758 >gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana] Length = 1352 Score = 175 bits (444), Expect(2) = 3e-47 Identities = 84/138 (60%), Positives = 99/138 (71%) Frame = -2 Query: 507 SDRGGEFCSHEFQKYCEQWGIKRELTAPYTPQQNGVVERKNRTVVEMARCLLAGAALPLR 328 SDRGGEF S EF KYCE GI+R+LT P +PQQNGVVERKNRT++EMAR +L LP Sbjct: 595 SDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLPKE 654 Query: 327 FWGEAVSTATYLINRSSTSALQGRTPYEVMHGSIPSVKHLRVFGCIAFTHIPSQRRQKLD 148 W EAV+ A YL+NRS T ++ G+TP E G P V HLRVFG IA H+P ++R KLD Sbjct: 655 LWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLD 714 Query: 147 EKSEKCIFIGYSIESKAY 94 +KSEK IFIGY SK Y Sbjct: 715 DKSEKYIFIGYDNNSKGY 732 Score = 38.1 bits (87), Expect(2) = 3e-47 Identities = 14/25 (56%), Positives = 19/25 (76%) Frame = -3 Query: 92 LYNPTSCRVIISRDVVFQEEARWNW 18 LYNP + + IISR++VF EE W+W Sbjct: 734 LYNPDTKKTIISRNIVFDEEGEWDW 758 >gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana] gi|12321387|gb|AAG50765.1|AC079131_10 copia-type polyprotein, putative [Arabidopsis thaliana] Length = 1320 Score = 174 bits (440), Expect(2) = 9e-47 Identities = 83/138 (60%), Positives = 98/138 (71%) Frame = -2 Query: 507 SDRGGEFCSHEFQKYCEQWGIKRELTAPYTPQQNGVVERKNRTVVEMARCLLAGAALPLR 328 SDRGGEF S EF KYCE GI+R+LT P +PQQNGV ERKNRT++EMAR +L LP Sbjct: 595 SDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKE 654 Query: 327 FWGEAVSTATYLINRSSTSALQGRTPYEVMHGSIPSVKHLRVFGCIAFTHIPSQRRQKLD 148 W EAV+ A YL+NRS T ++ G+TP E G P V HLRVFG IA H+P ++R KLD Sbjct: 655 LWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLD 714 Query: 147 EKSEKCIFIGYSIESKAY 94 +KSEK IFIGY SK Y Sbjct: 715 DKSEKYIFIGYDNNSKGY 732 Score = 38.1 bits (87), Expect(2) = 9e-47 Identities = 14/25 (56%), Positives = 19/25 (76%) Frame = -3 Query: 92 LYNPTSCRVIISRDVVFQEEARWNW 18 LYNP + + IISR++VF EE W+W Sbjct: 734 LYNPDTKKTIISRNIVFDEEGEWDW 758 >gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana] Length = 1291 Score = 174 bits (440), Expect(2) = 9e-47 Identities = 83/138 (60%), Positives = 98/138 (71%) Frame = -2 Query: 507 SDRGGEFCSHEFQKYCEQWGIKRELTAPYTPQQNGVVERKNRTVVEMARCLLAGAALPLR 328 SDRGGEF S EF KYCE GI+R+LT P +PQQNGV ERKNRT++EMAR +L LP Sbjct: 534 SDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKE 593 Query: 327 FWGEAVSTATYLINRSSTSALQGRTPYEVMHGSIPSVKHLRVFGCIAFTHIPSQRRQKLD 148 W EAV+ A YL+NRS T ++ G+TP E G P V HLRVFG IA H+P ++R KLD Sbjct: 594 LWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLD 653 Query: 147 EKSEKCIFIGYSIESKAY 94 +KSEK IFIGY SK Y Sbjct: 654 DKSEKYIFIGYDNNSKGY 671 Score = 38.1 bits (87), Expect(2) = 9e-47 Identities = 14/25 (56%), Positives = 19/25 (76%) Frame = -3 Query: 92 LYNPTSCRVIISRDVVFQEEARWNW 18 LYNP + + IISR++VF EE W+W Sbjct: 673 LYNPDTKKTIISRNIVFDEEGEWDW 697