BLASTX nr result

ID: Dioscorea21_contig00033787 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00033787
         (508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]   172   7e-48
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         175   3e-47
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...   175   3e-47
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   174   9e-47
gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]             174   9e-47

>emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]
          Length = 1424

 Score =  172 bits (437), Expect(2) = 7e-48
 Identities = 80/138 (57%), Positives = 101/138 (73%)
 Frame = -2

Query: 507  SDRGGEFCSHEFQKYCEQWGIKRELTAPYTPQQNGVVERKNRTVVEMARCLLAGAALPLR 328
            SDRG E+ S +F  +CE  G++R+LT  YTPQQNGVVERKN+TV+EMA+ +L    LP  
Sbjct: 660  SDRGMEYTSSQFGNFCEDEGVERQLTVAYTPQQNGVVERKNQTVMEMAKAMLYEKGLPKI 719

Query: 327  FWGEAVSTATYLINRSSTSALQGRTPYEVMHGSIPSVKHLRVFGCIAFTHIPSQRRQKLD 148
            FW EAV+TA YL+NR  T AL  +TP E   G  PSV+H +VFGC+ ++ +P QRR KLD
Sbjct: 720  FWAEAVNTAVYLLNRCPTKALLNKTPIEAWSGRKPSVRHFKVFGCLCYSQVPKQRRSKLD 779

Query: 147  EKSEKCIFIGYSIESKAY 94
            E SEKCIF+GYS +SK Y
Sbjct: 780  ETSEKCIFMGYSSQSKGY 797



 Score = 43.1 bits (100), Expect(2) = 7e-48
 Identities = 16/29 (55%), Positives = 23/29 (79%)
 Frame = -3

Query: 92  LYNPTSCRVIISRDVVFQEEARWNWQEGR 6
           LYN  + ++IISRDV+F E+  WNW+EG+
Sbjct: 799 LYNLKTXKLIISRDVIFDEKVAWNWEEGK 827


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  175 bits (444), Expect(2) = 3e-47
 Identities = 84/138 (60%), Positives = 99/138 (71%)
 Frame = -2

Query: 507  SDRGGEFCSHEFQKYCEQWGIKRELTAPYTPQQNGVVERKNRTVVEMARCLLAGAALPLR 328
            SDRGGEF S EF KYCE  GI+R+LT P +PQQNGVVERKNRT++EMAR +L    LP  
Sbjct: 595  SDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLPKE 654

Query: 327  FWGEAVSTATYLINRSSTSALQGRTPYEVMHGSIPSVKHLRVFGCIAFTHIPSQRRQKLD 148
             W EAV+ A YL+NRS T ++ G+TP E   G  P V HLRVFG IA  H+P ++R KLD
Sbjct: 655  LWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLD 714

Query: 147  EKSEKCIFIGYSIESKAY 94
            +KSEK IFIGY   SK Y
Sbjct: 715  DKSEKYIFIGYDNNSKGY 732



 Score = 38.1 bits (87), Expect(2) = 3e-47
 Identities = 14/25 (56%), Positives = 19/25 (76%)
 Frame = -3

Query: 92  LYNPTSCRVIISRDVVFQEEARWNW 18
           LYNP + + IISR++VF EE  W+W
Sbjct: 734 LYNPDTKKTIISRNIVFDEEGEWDW 758


>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score =  175 bits (444), Expect(2) = 3e-47
 Identities = 84/138 (60%), Positives = 99/138 (71%)
 Frame = -2

Query: 507  SDRGGEFCSHEFQKYCEQWGIKRELTAPYTPQQNGVVERKNRTVVEMARCLLAGAALPLR 328
            SDRGGEF S EF KYCE  GI+R+LT P +PQQNGVVERKNRT++EMAR +L    LP  
Sbjct: 595  SDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLPKE 654

Query: 327  FWGEAVSTATYLINRSSTSALQGRTPYEVMHGSIPSVKHLRVFGCIAFTHIPSQRRQKLD 148
             W EAV+ A YL+NRS T ++ G+TP E   G  P V HLRVFG IA  H+P ++R KLD
Sbjct: 655  LWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLD 714

Query: 147  EKSEKCIFIGYSIESKAY 94
            +KSEK IFIGY   SK Y
Sbjct: 715  DKSEKYIFIGYDNNSKGY 732



 Score = 38.1 bits (87), Expect(2) = 3e-47
 Identities = 14/25 (56%), Positives = 19/25 (76%)
 Frame = -3

Query: 92  LYNPTSCRVIISRDVVFQEEARWNW 18
           LYNP + + IISR++VF EE  W+W
Sbjct: 734 LYNPDTKKTIISRNIVFDEEGEWDW 758


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
            gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
            polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  174 bits (440), Expect(2) = 9e-47
 Identities = 83/138 (60%), Positives = 98/138 (71%)
 Frame = -2

Query: 507  SDRGGEFCSHEFQKYCEQWGIKRELTAPYTPQQNGVVERKNRTVVEMARCLLAGAALPLR 328
            SDRGGEF S EF KYCE  GI+R+LT P +PQQNGV ERKNRT++EMAR +L    LP  
Sbjct: 595  SDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKE 654

Query: 327  FWGEAVSTATYLINRSSTSALQGRTPYEVMHGSIPSVKHLRVFGCIAFTHIPSQRRQKLD 148
             W EAV+ A YL+NRS T ++ G+TP E   G  P V HLRVFG IA  H+P ++R KLD
Sbjct: 655  LWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLD 714

Query: 147  EKSEKCIFIGYSIESKAY 94
            +KSEK IFIGY   SK Y
Sbjct: 715  DKSEKYIFIGYDNNSKGY 732



 Score = 38.1 bits (87), Expect(2) = 9e-47
 Identities = 14/25 (56%), Positives = 19/25 (76%)
 Frame = -3

Query: 92  LYNPTSCRVIISRDVVFQEEARWNW 18
           LYNP + + IISR++VF EE  W+W
Sbjct: 734 LYNPDTKKTIISRNIVFDEEGEWDW 758


>gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]
          Length = 1291

 Score =  174 bits (440), Expect(2) = 9e-47
 Identities = 83/138 (60%), Positives = 98/138 (71%)
 Frame = -2

Query: 507 SDRGGEFCSHEFQKYCEQWGIKRELTAPYTPQQNGVVERKNRTVVEMARCLLAGAALPLR 328
           SDRGGEF S EF KYCE  GI+R+LT P +PQQNGV ERKNRT++EMAR +L    LP  
Sbjct: 534 SDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKE 593

Query: 327 FWGEAVSTATYLINRSSTSALQGRTPYEVMHGSIPSVKHLRVFGCIAFTHIPSQRRQKLD 148
            W EAV+ A YL+NRS T ++ G+TP E   G  P V HLRVFG IA  H+P ++R KLD
Sbjct: 594 LWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLD 653

Query: 147 EKSEKCIFIGYSIESKAY 94
           +KSEK IFIGY   SK Y
Sbjct: 654 DKSEKYIFIGYDNNSKGY 671



 Score = 38.1 bits (87), Expect(2) = 9e-47
 Identities = 14/25 (56%), Positives = 19/25 (76%)
 Frame = -3

Query: 92  LYNPTSCRVIISRDVVFQEEARWNW 18
           LYNP + + IISR++VF EE  W+W
Sbjct: 673 LYNPDTKKTIISRNIVFDEEGEWDW 697


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