BLASTX nr result

ID: Dioscorea21_contig00033738 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00033738
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525411.1| conserved hypothetical protein [Ricinus comm...   102   4e-20
ref|XP_002273488.2| PREDICTED: filament-like plant protein 3-lik...    99   5e-19
ref|XP_003632521.1| PREDICTED: filament-like plant protein 3-lik...    99   5e-19
emb|CAN83687.1| hypothetical protein VITISV_031800 [Vitis vinifera]    98   6e-19
ref|XP_002513759.1| DNA double-strand break repair rad50 ATPase,...    97   2e-18

>ref|XP_002525411.1| conserved hypothetical protein [Ricinus communis]
           gi|223535302|gb|EEF36978.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 347

 Score =  102 bits (253), Expect = 4e-20
 Identities = 53/111 (47%), Positives = 74/111 (66%)
 Frame = -1

Query: 335 VGHLDGALKECVRELRVSRXXXXXXXXXXXXXXXXDWEVEKSEFEGQLSELRTQLEAAKA 156
           VGHLD ALKEC+R+LR +R                +WE  KSE E +L EL+ QL+ AK+
Sbjct: 127 VGHLDAALKECMRQLRQAREEQEQRISEAFSRKTSEWEFMKSELERKLDELQAQLQTAKS 186

Query: 155 EVASSIDHDLQSKLEASETKNSALKDAWLAQSKDLKTRTLERDLSIQAAET 3
           E A+S+D +LQ KLEA+   N++LK   L+Q+++L+ R +E+DLS QAAET
Sbjct: 187 EAAASVDSNLQQKLEAAAKDNTSLKQELLSQAEELEIRIMEQDLSTQAAET 237


>ref|XP_002273488.2| PREDICTED: filament-like plant protein 3-like isoform 1 [Vitis
           vinifera]
          Length = 646

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 51/111 (45%), Positives = 74/111 (66%)
 Frame = -1

Query: 335 VGHLDGALKECVRELRVSRXXXXXXXXXXXXXXXXDWEVEKSEFEGQLSELRTQLEAAKA 156
           VGHLDGALKEC+R+LR +R                +WE  KSE E Q+ E++ QL+ AKA
Sbjct: 127 VGHLDGALKECLRQLRQAREEQEQKIHEAVVKRTHEWESTKSELESQIVEIQAQLQTAKA 186

Query: 155 EVASSIDHDLQSKLEASETKNSALKDAWLAQSKDLKTRTLERDLSIQAAET 3
           E  +++D  L+ KL A+E +N+ALK   L++ ++L+ RT+E++LS QAAET
Sbjct: 187 ETVATVDPGLELKLGAAEKENAALKLQLLSREEELEIRTIEQELSTQAAET 237


>ref|XP_003632521.1| PREDICTED: filament-like plant protein 3-like isoform 2 [Vitis
           vinifera]
          Length = 633

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 51/111 (45%), Positives = 74/111 (66%)
 Frame = -1

Query: 335 VGHLDGALKECVRELRVSRXXXXXXXXXXXXXXXXDWEVEKSEFEGQLSELRTQLEAAKA 156
           VGHLDGALKEC+R+LR +R                +WE  KSE E Q+ E++ QL+ AKA
Sbjct: 127 VGHLDGALKECLRQLRQAREEQEQKIHEAVVKRTHEWESTKSELESQIVEIQAQLQTAKA 186

Query: 155 EVASSIDHDLQSKLEASETKNSALKDAWLAQSKDLKTRTLERDLSIQAAET 3
           E  +++D  L+ KL A+E +N+ALK   L++ ++L+ RT+E++LS QAAET
Sbjct: 187 ETVATVDPGLELKLGAAEKENAALKLQLLSREEELEIRTIEQELSTQAAET 237


>emb|CAN83687.1| hypothetical protein VITISV_031800 [Vitis vinifera]
          Length = 749

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 51/111 (45%), Positives = 74/111 (66%)
 Frame = -1

Query: 335 VGHLDGALKECVRELRVSRXXXXXXXXXXXXXXXXDWEVEKSEFEGQLSELRTQLEAAKA 156
           VGHLDGALKEC+R+LR +R                +WE  KSE E Q+ E++ QL+ AKA
Sbjct: 104 VGHLDGALKECLRQLRQAREEQEQKIHEAVVKRTHEWESTKSELESQIVEIQAQLQTAKA 163

Query: 155 EVASSIDHDLQSKLEASETKNSALKDAWLAQSKDLKTRTLERDLSIQAAET 3
           E  +++D  L+ KL A+E +N+ALK   L++ ++L+ RT+E++LS QAAET
Sbjct: 164 EXVATVDPGLELKLGAAEKENAALKLQLLSREEELEIRTIEQELSTQAAET 214


>ref|XP_002513759.1| DNA double-strand break repair rad50 ATPase, putative [Ricinus
           communis] gi|223546845|gb|EEF48342.1| DNA double-strand
           break repair rad50 ATPase, putative [Ricinus communis]
          Length = 711

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 56/111 (50%), Positives = 69/111 (62%)
 Frame = -1

Query: 335 VGHLDGALKECVRELRVSRXXXXXXXXXXXXXXXXDWEVEKSEFEGQLSELRTQLEAAKA 156
           V HLDGALKECVR+LR +R                +WE  KSEFE QL EL+ + EAA +
Sbjct: 131 VSHLDGALKECVRQLRQAREEQEEKVHEAVARKMLEWESTKSEFESQLLELKIKAEAANS 190

Query: 155 EVASSIDHDLQSKLEASETKNSALKDAWLAQSKDLKTRTLERDLSIQAAET 3
           E  S I  DL  KLE  E  N++LK   L+ S++L+ RT+ERDLS QAAET
Sbjct: 191 ESTSQIVPDLCHKLEYLEKDNASLKLELLSLSEELEVRTIERDLSTQAAET 241


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