BLASTX nr result

ID: Dioscorea21_contig00033734 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00033734
         (673 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW76733.1| putative RING zinc finger domain superfamily prot...   175   8e-42
gb|AEJ07912.1| ring-H2 zinc finger protein, partial [Zea luxurians]   172   4e-41
dbj|BAJ85025.1| predicted protein [Hordeum vulgare subsp. vulgare]    172   7e-41
ref|NP_001062080.1| Os08g0484200 [Oryza sativa Japonica Group] g...   167   1e-39
tpg|DAA61870.1| TPA: putative RING zinc finger domain superfamil...   165   6e-39

>gb|AFW76733.1| putative RING zinc finger domain superfamily protein [Zea mays]
          Length = 421

 Score =  175 bits (443), Expect = 8e-42
 Identities = 119/251 (47%), Positives = 140/251 (55%), Gaps = 47/251 (18%)
 Frame = +3

Query: 3   RPAATGASGGDSPPAAFV---------GIKRGLDPTILASFPSMPYAEVRELKLGL--GA 149
           R    GAS G   PAA +           +RGLDP ++ASFP+M YA+ REL++G    A
Sbjct: 82  RRCGRGASAGPVIPAAALLALSRQEERNQQRGLDPAVVASFPTMRYADARELRVGGKDAA 141

Query: 150 LECAVCLLEFEDDETLKLLPRCCHVYHSDCIDAWLAAHVTCPVCRFNL-AAAPA------ 308
           LECAVCL EFEDDE L+LLP C H +H DCI  WLA HVTCPVCR NL    PA      
Sbjct: 142 LECAVCLSEFEDDEELRLLPSCSHAFHPDCIGEWLAGHVTCPVCRCNLDPEEPAGEATGE 201

Query: 309 ---EDHVAIDVS----------DEREAEVAELARIGSRKRELRSRSIR-GPRFVRSRSAG 446
              +DHVAID S          D R  E  EL RIGS++R +RSRS R  P   RS S G
Sbjct: 202 GRQQDHVAIDASHDGAGEEGEEDRRRDEAMELERIGSQRRAVRSRSGRPAPLVPRSHSTG 261

Query: 447 -NLAAVRVD----RFTLRLPEPVMEEVIDAATSSGQHRR-------AVSCAVGRSGRW-- 584
            +LA  R+D    RFTLRLPE V  E++ AA      R        A S  +GRS RW  
Sbjct: 262 HSLATTRLDGDVERFTLRLPELVRREMVAAAGEESLRRTGLRERGGARSARLGRSDRWPS 321

Query: 585 -ISRALSVKKP 614
            I+R LS + P
Sbjct: 322 FITRTLSSRVP 332


>gb|AEJ07912.1| ring-H2 zinc finger protein, partial [Zea luxurians]
          Length = 299

 Score =  172 bits (437), Expect = 4e-41
 Identities = 118/251 (47%), Positives = 139/251 (55%), Gaps = 47/251 (18%)
 Frame = +3

Query: 3   RPAATGASGGDSPPAAFV---------GIKRGLDPTILASFPSMPYAEVRELKLGL--GA 149
           R    GAS G   PAA +           +RGLDP ++ASFP+M YA+ REL++G    A
Sbjct: 23  RRCGRGASSGPVIPAAALLALSRQEQRNQQRGLDPAVVASFPTMRYADARELRVGGKDAA 82

Query: 150 LECAVCLLEFEDDETLKLLPRCCHVYHSDCIDAWLAAHVTCPVCRFNL-AAAPA------ 308
           LECAVCL EFEDDE L+LLP C H +H DCI  WLA HVTCPVCR NL    PA      
Sbjct: 83  LECAVCLSEFEDDEELRLLPNCSHAFHPDCIGEWLAGHVTCPVCRCNLDPEEPAGEATGE 142

Query: 309 ---EDHVAIDVS----------DEREAEVAELARIGSRKRELRSRSIR-GPRFVRSRSAG 446
              +DHVAID S          D R  E  EL RIGS++R +RSRS R  P   RS S G
Sbjct: 143 GRQQDHVAIDASRDGAGEEGEEDRRRDEAMELERIGSQRRAVRSRSGRPAPLVPRSHSTG 202

Query: 447 -NLAAVRVD----RFTLRLPEPVMEEVIDAATSSGQHRR-------AVSCAVGRSGRW-- 584
            +LA  R+D    RFTLRLPE V  E++ AA      R        A S  +GRS RW  
Sbjct: 203 HSLATTRLDGDVERFTLRLPELVRREMVAAAGEESLRRTGLRERGGARSARLGRSDRWPS 262

Query: 585 -ISRALSVKKP 614
            I+R L  + P
Sbjct: 263 FITRTLWSRVP 273


>dbj|BAJ85025.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 397

 Score =  172 bits (435), Expect = 7e-41
 Identities = 112/243 (46%), Positives = 133/243 (54%), Gaps = 67/243 (27%)
 Frame = +3

Query: 63  KRGLDPTILASFPSMPYAEVRELKLGLGALECAVCLLEFEDDETLKLLPRCCHVYHSDCI 242
           +RGLDP +L +FP+M YA+V+E K   GALECAVC+ EF+DD+TL+LLP+C HV+H DCI
Sbjct: 105 QRGLDPAVLETFPTMAYADVKEHKAVKGALECAVCISEFDDDDTLRLLPKCSHVFHPDCI 164

Query: 243 DAWLAAHVTCPVCRFNLA------------AAPAEDH--------------------VAI 326
           D WLA+HVTCPVCR NL             AAPAE                      V I
Sbjct: 165 DTWLASHVTCPVCRANLVPGDDADAPAAGDAAPAEPSSVHPAPQPQEPASETEAAHAVVI 224

Query: 327 DV---SDER--EAEVAELARIGSRKRELRSRSIRGP-RFVRSRSAGNLAAVR----VDRF 476
           DV    DER    E  EL RIGS KR LRS+S RGP RF RS S G+  A R     +RF
Sbjct: 225 DVEESEDERIIREETDELTRIGSLKRALRSKSSRGPARFPRSHSTGHSLAARAGTGAERF 284

Query: 477 TLRLPEPVMEEVIDA-------------ATSSGQHRRAV------------SCAVGRSGR 581
           TLRLPE V+ EV+ A             A   G  RRA+            S  +G+SGR
Sbjct: 285 TLRLPESVLREVVAAGKLRRTQSLVAFTAGRQGSTRRALRLGGDGSSRGGRSVRLGQSGR 344

Query: 582 WIS 590
           W S
Sbjct: 345 WPS 347


>ref|NP_001062080.1| Os08g0484200 [Oryza sativa Japonica Group]
           gi|42408167|dbj|BAD09305.1| putative RING-H2 zinc finger
           protein [Oryza sativa Japonica Group]
           gi|42409391|dbj|BAD10704.1| putative RING-H2 zinc finger
           protein [Oryza sativa Japonica Group]
           gi|113624049|dbj|BAF23994.1| Os08g0484200 [Oryza sativa
           Japonica Group] gi|125561949|gb|EAZ07397.1| hypothetical
           protein OsI_29648 [Oryza sativa Indica Group]
           gi|215768935|dbj|BAH01164.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 413

 Score =  167 bits (424), Expect = 1e-39
 Identities = 108/263 (41%), Positives = 138/263 (52%), Gaps = 67/263 (25%)
 Frame = +3

Query: 27  GGDSPPAAFVGIKRGLDPTILASFPSMPYAEVRELKLGLGALECAVCLLEFEDDETLKLL 206
           GG +  AA     RGLDP +L +FP+M YA+V+  K G GALECAVCL EF+DDETL+LL
Sbjct: 102 GGFTFAAARSRRVRGLDPAVLGAFPTMAYADVKAHKAGKGALECAVCLSEFDDDETLRLL 161

Query: 207 PRCCHVYHSDCIDAWLAAHVTCPVCRFNLA-----------------------------A 299
           PRC H +H+DCIDAWLA+HVTCPVCR NLA                             A
Sbjct: 162 PRCSHAFHADCIDAWLASHVTCPVCRANLAFDAGVPPPPLAPPHALTTGQDVAAAPPQPA 221

Query: 300 APAEDHVAIDVSDEREA-------EVAELARIGSRKRELRSRS-IRGPRFVRSRSAGNLA 455
           AP +  V + V+D  E        E AEL RIGS KR LRS+S  R P+F RS + G+  
Sbjct: 222 APEQVTVDVVVADAEETEERIRREEAAELMRIGSVKRALRSKSGRRPPQFPRSHTTGHSL 281

Query: 456 AV----------RVDRFTLRLPEPVMEEVIDA---------------ATSSGQHRRAVSC 560
           A             +R+TLRLP+ V+ E++ +               A + G  R   S 
Sbjct: 282 AAAAAVPATADDAAERYTLRLPDHVLREIVTSARLRRTTSLQSFRTTAAAGGGARAGRSV 341

Query: 561 AVGRSGRW-----ISRALSVKKP 614
            +G+SGRW     + R  S + P
Sbjct: 342 RLGQSGRWSNVSSLMRTFSARLP 364


>tpg|DAA61870.1| TPA: putative RING zinc finger domain superfamily protein [Zea
           mays]
          Length = 404

 Score =  165 bits (418), Expect = 6e-39
 Identities = 104/227 (45%), Positives = 128/227 (56%), Gaps = 45/227 (19%)
 Frame = +3

Query: 63  KRGLDPTILASFPSMPYAEVRELKLGLGALECAVCLLEFEDDETLKLLPRCCHVYHSDCI 242
           +RGLD  +L SFP+M YA+V+  K G GALECAVCL EF+DDETL+LLP+C HV+H DCI
Sbjct: 99  QRGLDSAVLESFPTMAYADVKAHKAGKGALECAVCLSEFDDDETLRLLPKCSHVFHPDCI 158

Query: 243 DAWLAAHVTCPVCRFNLA-------------------------------AAPAEDHVAID 329
           D WLA+HVTCPVCR NLA                               A P    V ID
Sbjct: 159 DTWLASHVTCPVCRTNLALGPDANAPPPDDDTPELLPAPEAQELPSPTSAPPPSAAVVID 218

Query: 330 VSDERE-----AEVAELARIGSRKRELRSRSIRGP-RFVRSRSAGN------LAAVRVDR 473
           V +  E     AE  EL RIGS KR LRS+S R P RF RS S G+       A    +R
Sbjct: 219 VEETEEERIIRAEADELMRIGSVKRALRSKSGRAPARFPRSHSTGHSLAASACATTGTER 278

Query: 474 FTLRLPEPVMEEVIDAATSSGQHRRAVSCAVGRSGRWIS--RALSVK 608
           FTLRLP+ V+ ++    T++G+ +R  S    RS R  S  R +SV+
Sbjct: 279 FTLRLPDHVLRDL----TAAGKLQRTTSLVAFRSSRGGSTRRGVSVR 321


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